SRGD Gene ID 983 BLASTp at NCBI n/a n/a  
OrganismsOs ,Pp ,Gm ,Pt ,Vv ,Sb ,At
Gene count9
Cintron count7
Cintron classesU2 ,im
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Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pm.C_120049
At~AT2G36130.1
Sb~estExt_Genewise1.C_chr_77032
Os~LOC_Os08g44520.2
Os~LOC_Os08g44520.3
Pt~estExt_fgenesh4_pm.C_LG_XVI0258
Vv~GSVIVP00021565001
Gm~Glyma03g35620.1
Gm~Glyma19g38260.1
----MADLEAPQVVLHTTMGDITVELYMKHAPKTCRNFMELSRRAYYNNVLFHRVIKNFM
-MSARPEGSPPEVTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFI
MWGS-TDGGTPEVTLETSMGAVTVEMYYKHAPKTCRNFVELARRGYYDNVIFHRIIKDFI
MWGS-ADGGTPEVTLETSMGAFTIEMYYKHAPKTCRNFLELSRRGYYDNVIFHRIIKDFI
MWGS-ADGGTPEVTLETSMGAFTIEMYYKHAPKTCRNFLELSRRGYYDNVIFHRIIKDFI
-MTADAEGGAPEVTLETSMGPFTVELYYKHAPRTCRNFLELSRRGYYDNVKFHRIIKDFI
MWGS-ADGGAPEVTLETSMGSFTVELYYKHAPRTCRNFLELSRRGYYDNVKFHRIIKDFI
MWAS-AEGGAPEVTLETSMGSFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFI
MWASAAEGGAPEVTLETSMGSFTFELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFI
1: 24-24
estExt_fgenesh1_pm.C_120049 0 0 U2 GTATCTCT..GCAG
AT2G36130.1 0 0 U2 GTTTCTCT..TCAG
estExt_Genewise1.C_chr_77032 0 0 U2 GTACCTCC..GTAG
LOC_Os08g44520.2 0 0 U2 GTACCATT..ACAG
LOC_Os08g44520.3 0 0 U2 GTACCATT..ACAG
estExt_fgenesh4_pm.C_LG_XVI0258 0 0 U2 GTGCTTCT..ACAG
GSVIVP00021565001 0 0 U2 GTCTGTCT..ACAG
Glyma03g35620.1 0 0 U2 GTACTTGC..TTAG
Glyma19g38260.1 0 0 U2 GTGCTTTT..TTAG
2: 56-56
estExt_fgenesh1_pm.C_120049 1 0 U2 GTCAGTCA..ACAG
AT2G36130.1 1 0 U2 GTATGTTT..TCAG
estExt_Genewise1.C_chr_77032 1 0 U2 GTATCTCC..TTAG
LOC_Os08g44520.2 1 0 U2 GTTTCTGC..TTAG
LOC_Os08g44520.3 1 0 U2 GTTTCTGC..TTAG
estExt_fgenesh4_pm.C_LG_XVI0258 1 0 U2 GTACTATA..GTAG
GSVIVP00021565001 1 0 U2 GTATTGCT..GCAG
Glyma03g35620.1 1 0 U2 GTTTGATT..GTAG
Glyma19g38260.1 1 0 U2 GTTTGATT..GTAG
Pp~estExt_fgenesh1_pm.C_120049
At~AT2G36130.1
Sb~estExt_Genewise1.C_chr_77032
Os~LOC_Os08g44520.2
Os~LOC_Os08g44520.3
Pt~estExt_fgenesh4_pm.C_LG_XVI0258
Vv~GSVIVP00021565001
Gm~Glyma03g35620.1
Gm~Glyma19g38260.1
VQGGDPTGTGRGGESIYGS------------KFEDEIRRDLKHTGAGILSMANSGPNTNG
VQGGDPTGTGRGGESIYGS------------KFEDEINKELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGESIYGA------------KFEDEIKSELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGESIYGSAYFLLSSSFNLAKFEDEIRPELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGESIYGA------------KFEDEIRPELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGKSIYGD------------KFEDEINPELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGESIYGS------------KFEDEIKPELKHTGAGILSMANAGPNSNG
VQGGDPTGTGRGGESIYGA------------KFEDEIKRELKHTGAGILSMANAGPNTNG
VQGGDPTGTGRGGESIYGA------------KFEDEIKRELKHTGAGILSMANAGPNTNG
3: 76-76
estExt_fgenesh1_pm.C_120049 2 2 U2 GTACATGT..GCAG
AT2G36130.1 2 2 U2 GTACGTTA..CTAG
estExt_Genewise1.C_chr_77032 2 2 U2 GTGAGCAG..gcag
LOC_Os08g44520.3 2 2 U2 GTCAGCAT..ACAG
estExt_fgenesh4_pm.C_LG_XVI0258 2 2 U2 GTTAGTTT..ATAG
GSVIVP00021565001 2 2 U2 GTGTGATT..TCAG
Glyma03g35620.1 2 2 U2 GTATACTG..ACAG
Glyma19g38260.1 2 2 U2 GTATCCTG..GCAG
4: 88-88
LOC_Os08g44520.2 2 2 U2 GTAAGATT..ACAG
Pp~estExt_fgenesh1_pm.C_120049
At~AT2G36130.1
Sb~estExt_Genewise1.C_chr_77032
Os~LOC_Os08g44520.2
Os~LOC_Os08g44520.3
Pt~estExt_fgenesh4_pm.C_LG_XVI0258
Vv~GSVIVP00021565001
Gm~Glyma03g35620.1
Gm~Glyma19g38260.1
SQFFITLAPTPWLDSKHTIFGRICKGMDVVKRLGMVETDKHDRPIHDVKILKTSVID--
SQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHEVKILRTKVID--
SQFFITLAPCQSLDGKHTIFGRVCRGMEIVKRLGSVQTDKNDRPIHEVKILRAIVKD--
SQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRTVVKD--
SQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRTVVKD--
SQFFITLSPTPSLDGKHTIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD--
SQFFITLAPAQSLDGKHTIFGRVCRGMEIIKRLGSVQTDNTDRPIHDVKILRTAVKDLQ
SQFFITLAPCPSLDGKHTIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRTSVKD--
SQFFITLAPCPSLDGKHTIFGRVCRGMEIMKRLGSIQTDNNDRPIHNVKILRTSVKD--
5: 133-133
estExt_fgenesh1_pm.C_120049 3 1 U2 GTATGTCA..GCAG
AT2G36130.1 3 1 U2 GTAAACAC..CTAG
estExt_Genewise1.C_chr_77032 3 1 U2 GTAAGGAT..CCAG
LOC_Os08g44520.2 3 1 U2 GTGAGTCT..CCAG
LOC_Os08g44520.3 3 1 U2 GTGAGTCT..CCAG
estExt_fgenesh4_pm.C_LG_XVI0258 3 1 U2 GTAATTTT..CCAG
GSVIVP00021565001 3 1 U2 GTAACAAT..CCAG
Glyma03g35620.1 3 1 U2 GTAATTTT..CCAG
Glyma19g38260.1 3 1 U2 GTAATATT..CCAG
6: 161-161
estExt_fgenesh1_pm.C_120049 4 2 U2 GTGAGTGA..GCAG
AT2G36130.1 4 2 U2 GTAAAGTT..CCAG
estExt_Genewise1.C_chr_77032 4 2 U2 GTAATACT..TCAG
LOC_Os08g44520.2 4 2 U2 GTAACACC..TCAG
LOC_Os08g44520.3 4 2 U2 GTAACACC..TCAG
estExt_fgenesh4_pm.C_LG_XVI0258 4 2 U2 GTAAAAAC..ACAG
GSVIVP00021565001 4 2 U2 GTAAGTCT..CCAG
Glyma03g35620.1 4 2 U2 GTATGTCA..TCAG
Glyma19g38260.1 4 2 U2 GTATGTTA..TCAG


3' UTR introns