SRGD Gene ID 982 BLASTp at NCBI n/a n/a  
OrganismsPp ,Pt ,Gm ,Sb ,Zm ,Vv ,At ,Os
Gene count9
Cintron count8
Cintron classesU2 ,im
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Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
-----MVNN-VNGVFYATSYHPIQAGSIDGTDITAHDNGVYRALLASTTGLYDPLGDPNA
MSGGSGGGA-ASAVFYAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKA
----MSGGS-VSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKA
----MSGGS-VSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKA
--MSGGGNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKA
--MSVRSKN-LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRA
--MSVRSKN-LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLDDPFGDPKA
----MSGSR-ANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKV
----MSGRS-INSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKA
1: 50-50
fgenesh1_pg.scaffold_70000045 0 1 U2 GTGAGTTT..ACAG
LOC_Os09g33870.1 0 1 U2 GTGCGTGC..TCAG
GRMZM2G301536_T01 0 1 U2 GTGCGTGC..TCAG
Sb02g029740 0 1 U2 GTGCGTGC..TCAG
AT2G43370.1 0 1 U2 GTATGTAT..AAAG
Glyma08g48140.1 0 1 U2 GTTTGTTT..GCAG
Glyma18g53350.1 0 0 U2 TGTCTGTT..TGCA
GSVIVP00001916001 0 1 U2 GTAACATT..TCAG
fgenesh4_pg.C_scaffold_64000067 0 1 U2 GTAAGTAA..GCAG
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
KGDPYCSLFVGRLSTQTDEKSLHKAMSKFGRIKSLRLVRHIVTGASCGYAFVEFETEKEM
TGDPYCTVFVGRLSRYTDDETLRKEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM
SGDPHRTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM
SGDPYCTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM
VGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEM
AGDPYCTLFVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREM
TGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM
IGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREM
IGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREM
2: 82-83
fgenesh1_pg.scaffold_70000045 1 0 U2 GTATGGTA..GCAG
LOC_Os09g33870.1 1 0 U2 GTGCGCGG..GCAG
GRMZM2G301536_T01 1 0 U2 GTGCGCCC..GCAG
Sb02g029740 1 0 U2 GTGCGCCC..GCAG
AT2G43370.1 1 0 U2 GTTAATGA..GTAG
Glyma08g48140.1 1 0 U2 GTACCATT..TCAG
Glyma18g53350.1 1 2 U2 GGTACCAT..TTCA
GSVIVP00001916001 1 0 U2 GTATAGTT..TCAG
fgenesh4_pg.C_scaffold_64000067 1 0 U2 GTGGAATA..TCAG
3: 100-100
fgenesh1_pg.scaffold_70000045 2 1 U2 GTTAGTTG..GCAG
LOC_Os09g33870.1 2 1 U2 GTGAGTTT..TCAG
GRMZM2G301536_T01 2 1 U2 GTGAGTGA..GCAG
Sb02g029740 2 1 U2 GTGAGTGA..GCAG
AT2G43370.1 2 1 U2 GTAAGATT..TTAG
Glyma08g48140.1 2 1 U2 GTATTATT..ACAG
Glyma18g53350.1 2 0 U2 GGTATTAT..GTCA
GSVIVP00001916001 2 1 U2 GTAATTGG..GTAG
fgenesh4_pg.C_scaffold_64000067 2 1 U2 GTAATGTT..GCAG
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
YMAYEGAHLSKLDGASILVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRDRPFRAP
RRAYEDAHHSIIDGSEVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQLRFGGRERPFRAP
HRAYEDAHHSVIEGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAP
RRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAP
LRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAP
RRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAP
RRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAP
RRAYEDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAP
RRAYKDGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAP
4: 123-124
fgenesh1_pg.scaffold_70000045 3 0 U2 GTATGCTT..GCAG
LOC_Os09g33870.1 3 0 U2 GTTATATG..ATAG
GRMZM2G301536_T01 3 0 U2 GTATCTGC..TAAG
Sb02g029740 3 0 U2 GTATCTGC..CAAG
AT2G43370.1 3 0 U2 GTGCTGTG..GCAG
Glyma08g48140.1 3 0 U2 GTGCTGGA..GCAG
Glyma18g53350.1 3 2 U2 GGTGCTGC..TGCA
GSVIVP00001916001 3 0 U2 GTGCAATG..GCAG
fgenesh4_pg.C_scaffold_64000067 3 0 U2 GTTTTATA..GCAG
5: 154-154
fgenesh1_pg.scaffold_70000045 4 1 U2 GTGGGTAT..GCAG
LOC_Os09g33870.1 4 1 U2 GTGTGGTT..ATAG
GRMZM2G301536_T01 4 1 U2 GTATGTAC..ACAG
Sb02g029740 4 1 U2 GTATGTAC..GCAG
AT2G43370.1 4 1 U2 GTTTGCCA..ACAG
Glyma08g48140.1 4 1 U2 GTCAGTTA..ACAG
Glyma18g53350.1 4 0 U2 GGTCAGTT..TACA
GSVIVP00001916001 4 1 U2 GTCAGTTA..ACAG
fgenesh4_pg.C_scaffold_64000067 4 1 U2 GTTAGTTG..ATAG
6: 179-179
fgenesh1_pg.scaffold_70000045 5 2 U2 GTACTTCC..GCAG
LOC_Os09g33870.1 5 2 U2 GTATGAAC..ACAG
GRMZM2G301536_T01 5 2 U2 GTATGATC..ACAG
Sb02g029740 5 2 U2 GTATGATC..ATAG
AT2G43370.1 5 2 U2 GTATGGTT..TCAG
Glyma08g48140.1 5 2 U2 GTAAATTC..CCAG
Glyma18g53350.1 5 1 U2 TGTAAATT..ACCA
GSVIVP00001916001 5 2 U2 GTATGGAC..CCAG
fgenesh4_pg.C_scaffold_64000067 5 2 U2 GTATGTGC..GCAG
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
LRPIPHEELQKLGIPLPPEGHYMTRFQVPPLPQRMHSTTSEYDNRSKFSELRHHRVKDVG
LRPIPYDELKRLGIPPPPEGRYMTRYQVPPPPRRKSSDI----YREES--PPKRRSKDRV
LRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSNI----DIEDS--PPGRRSKDRA
LRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSKV----DIEDS--PPRRRSKDGA
LRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVS----DREEE--YYREKSS---
LKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLS----DREEDSHSHRRGSND--
RKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRSERSLS----DREEDSHSHRRGSNDRN
LRPIPLDDLKRLGIPPPPEGRYMSRFQVPPPPRRKRSNM----DREEP--SHRGSSIDRE
LQTIPYDDLKRLGIPPPPEGRYMSHYEVPSPPRRKRSSR----DKEES--SHRRSSIDK-
7: 205-206
fgenesh1_pg.scaffold_70000045 6 0 U2 GTATCTTT..GTAG
LOC_Os09g33870.1 6 0 U2 GTAGTTCA..ACAG
GRMZM2G301536_T01 6 0 U2 GTAGCCTA..ACAG
Sb02g029740 6 0 U2 GTAGTTTA..ACAG
AT2G43370.1 6 0 U2 GTCTACCA..GCAG
Glyma08g48140.1 6 0 U2 GTGTTATT..ACAG
Glyma18g53350.1 6 2 U2 GGTGTTGT..TACA
GSVIVP00001916001 6 0 U2 GTAAATTA..GCAG
fgenesh4_pg.C_scaffold_64000067 6 0 U2 GTATTGTT..TTAG
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
GREVNEHASNKGHGSESGEARERDWHRRRRVDHRDHDEAEQSRSYRKVMVEDRGQEEIPR
DSSHYRRYCSPTQDDDSTVSTHRRKGSHDRREETE--RRTRAYISREAGSYSKR------
GVSTYR---RQRSSNDDDETLLKRKSSRDGLEESQSRRSARSSITKEDNRYSSQRKSKEH
GVSTYR---RQISSTDDDETPRRRKSSHDGPEESQSRRSTRSSITREDNRYSRQRKSKGH
---------VEREEEFKERSSLRSYHSHRSSAHT--------------------------
---------RNRTEDSHRSSVDIGEGHCRSSSHRDDHSRGRSSLERS-------------
---------RNKTEDGLRSSVDIEEGHYRSSSHRDNHSRGRSSMERS-------------
DRYHKGGSIEGEEHSHEGSSVDREEHSHRRSSIDK-----RSSIDRE-------------
---------EAEESSNIRSYRDKEEHYERGGYHHK-----RSSLDRE-------------
8: 266-266
fgenesh4_pg.C_scaffold_64000067 7 1 U2 GTGAAAGG..CCAG
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
ESKYEGFEFESKRSNPKTFRDDQRTEDTHYGEEAIERKRRREPSHASHEYEE--------
-----------------SPTEDDG------------------------------------
DKGHRKHRRSQDPGEVSPPAEEDGSYERQRTLEEPDRSPDRYHHHWHHRDDTYESRHLRH
DEGYHMHRRSQEAGEVSPP-EEGGSYERERTSEEPGRGTDRYHHHRHHTEGTYESRYSHH
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
-ERRQNKRRQAEDSREHSAERSWRYDPQYRAKTNRSSDYHSEKSSEWREAESEQSRSRRD
-DRRKRRRSREPGELSPYKEDDDNSK---RGRSSVEPGFSPYQSHHHRHHRERHDSSSHS
RDHRKRRRSQEPGEVSPPEEDC-SHE---RERTSDEPGRSPDRYHHHWHQRDGTYESRHS
RGHRKRRRSQELGELSPPEEDV-SYE---KERTSDEPGRSPDRYHHHRHHREDTYESRHS
-HSSHRRRSKDREECSREESRSDRKE---RAR------GMEDRYGDNKGEVSGSKRSKRS
-GRYHDRSSSEKEHRYRSSTDKDKHS---QKR------KESDRSSSEK---EHQYRSSTD
-GRYHDRSSSEKEHRHGSSTDKDKHS---QKR------KESDRSSLEK---ERRHRSSTD
-ERFHKRSSSDREVRSHKRSSTDLVE------------RSDKRSFIHGEERFHS-RSSMD
-EHYEKRSPVDMEEPSHKKLRD----------------REE----------RTHKRSSRD
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
TERWDAHGR-----------------------------DLEPRNRWEEPSDHKKPSRHSE
------------------------------------------------------RHGERR
RHRDHRKRRRSQEPGVSPLEEDSSYERERTSDELGRSPDWYHHHRHHREDTYESRHSHHR
---------------------------------------------HHREDTYESRHSHHR
------------------------------------------------------EEDRSR
------------------------------------------------------KDKHSR
------------------------------------------------------KDKHSR
------------------------------------------------------WEEHSH
------------------------------------------------------REEGSR
Pp~fgenesh1_pg.scaffold_70000045
Os~LOC_Os09g33870.1
Zm~GRMZM2G301536_T01
Sb~Sb02g029740
At~AT2G43370.1
Gm~Glyma08g48140.1
Gm~Glyma18g53350.1
Vv~GSVIVP00001916001
Pt~fgenesh4_pg.C_scaffold_64000067
KKHRHSESTHQHRDRDQGYPEEDGIKRHRSHRKHKHRERSVEEKFDIEEMERRKSKDR
HQDDRGNHSR---------------NRRSESRDYSH----------------------
DRRRHGDRHR---------------TKRSESRDYRD----------------------
DRRRHGDRHH---------------SKRSESRDYRD----------------------
KRHKHLPSHH---------------HRRSYSQDHHSSD--------------------
KRKESDRSSPEKEHGLRSSTDKDKHHRKRKERDEQS----------------------
KRKERDERSQ---------------RREKYSHHSPHKD--------------------
KSSMDRERHS---------------HKR--HRQY------------------------
KRHKHGSSSD---------------KRRKEDA--------------------------