SRGD	Gene ID 982	BLASTp at NCBI	n/a	n/a		Organisms Pp ,Pt ,Gm ,Sb ,Zm ,Vv ,At ,Os Gene count 9 Cintron count 8 Cintron classes U2 ,im
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		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	-----MVNN-VNGVFYATSYHPIQAGSIDGTDITAHDNGVYRALLASTTGLYDPLGDPNA MSGGSGGGA-ASAVFYAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKA ----MSGGS-VSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKA ----MSGGS-VSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKA --MSGGGNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKA --MSVRSKN-LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRA --MSVRSKN-LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLDDPFGDPKA ----MSGSR-ANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKV ----MSGRS-INSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKA	1: 50-50 fgenesh1_pg.scaffold_70000045 0 1 U2 GTGAGTTT..ACAG LOC_Os09g33870.1 0 1 U2 GTGCGTGC..TCAG GRMZM2G301536_T01 0 1 U2 GTGCGTGC..TCAG Sb02g029740 0 1 U2 GTGCGTGC..TCAG AT2G43370.1 0 1 U2 GTATGTAT..AAAG Glyma08g48140.1 0 1 U2 GTTTGTTT..GCAG Glyma18g53350.1 0 0 U2 TGTCTGTT..TGCA GSVIVP00001916001 0 1 U2 GTAACATT..TCAG fgenesh4_pg.C_scaffold_64000067 0 1 U2 GTAAGTAA..GCAG
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	KGDPYCSLFVGRLSTQTDEKSLHKAMSKFGRIKSLRLVRHIVTGASCGYAFVEFETEKEM TGDPYCTVFVGRLSRYTDDETLRKEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM SGDPHRTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM SGDPYCTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREM VGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEM AGDPYCTLFVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREM TGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM IGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREM IGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREM	2: 82-83 fgenesh1_pg.scaffold_70000045 1 0 U2 GTATGGTA..GCAG LOC_Os09g33870.1 1 0 U2 GTGCGCGG..GCAG GRMZM2G301536_T01 1 0 U2 GTGCGCCC..GCAG Sb02g029740 1 0 U2 GTGCGCCC..GCAG AT2G43370.1 1 0 U2 GTTAATGA..GTAG Glyma08g48140.1 1 0 U2 GTACCATT..TCAG Glyma18g53350.1 1 2 U2 GGTACCAT..TTCA GSVIVP00001916001 1 0 U2 GTATAGTT..TCAG fgenesh4_pg.C_scaffold_64000067 1 0 U2 GTGGAATA..TCAG 3: 100-100 fgenesh1_pg.scaffold_70000045 2 1 U2 GTTAGTTG..GCAG LOC_Os09g33870.1 2 1 U2 GTGAGTTT..TCAG GRMZM2G301536_T01 2 1 U2 GTGAGTGA..GCAG Sb02g029740 2 1 U2 GTGAGTGA..GCAG AT2G43370.1 2 1 U2 GTAAGATT..TTAG Glyma08g48140.1 2 1 U2 GTATTATT..ACAG Glyma18g53350.1 2 0 U2 GGTATTAT..GTCA GSVIVP00001916001 2 1 U2 GTAATTGG..GTAG fgenesh4_pg.C_scaffold_64000067 2 1 U2 GTAATGTT..GCAG
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	YMAYEGAHLSKLDGASILVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRDRPFRAP RRAYEDAHHSIIDGSEVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQLRFGGRERPFRAP HRAYEDAHHSVIEGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAP RRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAP LRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAP RRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAP RRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAP RRAYEDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAP RRAYKDGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAP	4: 123-124 fgenesh1_pg.scaffold_70000045 3 0 U2 GTATGCTT..GCAG LOC_Os09g33870.1 3 0 U2 GTTATATG..ATAG GRMZM2G301536_T01 3 0 U2 GTATCTGC..TAAG Sb02g029740 3 0 U2 GTATCTGC..CAAG AT2G43370.1 3 0 U2 GTGCTGTG..GCAG Glyma08g48140.1 3 0 U2 GTGCTGGA..GCAG Glyma18g53350.1 3 2 U2 GGTGCTGC..TGCA GSVIVP00001916001 3 0 U2 GTGCAATG..GCAG fgenesh4_pg.C_scaffold_64000067 3 0 U2 GTTTTATA..GCAG 5: 154-154 fgenesh1_pg.scaffold_70000045 4 1 U2 GTGGGTAT..GCAG LOC_Os09g33870.1 4 1 U2 GTGTGGTT..ATAG GRMZM2G301536_T01 4 1 U2 GTATGTAC..ACAG Sb02g029740 4 1 U2 GTATGTAC..GCAG AT2G43370.1 4 1 U2 GTTTGCCA..ACAG Glyma08g48140.1 4 1 U2 GTCAGTTA..ACAG Glyma18g53350.1 4 0 U2 GGTCAGTT..TACA GSVIVP00001916001 4 1 U2 GTCAGTTA..ACAG fgenesh4_pg.C_scaffold_64000067 4 1 U2 GTTAGTTG..ATAG 6: 179-179 fgenesh1_pg.scaffold_70000045 5 2 U2 GTACTTCC..GCAG LOC_Os09g33870.1 5 2 U2 GTATGAAC..ACAG GRMZM2G301536_T01 5 2 U2 GTATGATC..ACAG Sb02g029740 5 2 U2 GTATGATC..ATAG AT2G43370.1 5 2 U2 GTATGGTT..TCAG Glyma08g48140.1 5 2 U2 GTAAATTC..CCAG Glyma18g53350.1 5 1 U2 TGTAAATT..ACCA GSVIVP00001916001 5 2 U2 GTATGGAC..CCAG fgenesh4_pg.C_scaffold_64000067 5 2 U2 GTATGTGC..GCAG
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	LRPIPHEELQKLGIPLPPEGHYMTRFQVPPLPQRMHSTTSEYDNRSKFSELRHHRVKDVG LRPIPYDELKRLGIPPPPEGRYMTRYQVPPPPRRKSSDI----YREES--PPKRRSKDRV LRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSNI----DIEDS--PPGRRSKDRA LRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSKV----DIEDS--PPRRRSKDGA LRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVS----DREEE--YYREKSS--- LKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLS----DREEDSHSHRRGSND-- RKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRSERSLS----DREEDSHSHRRGSNDRN LRPIPLDDLKRLGIPPPPEGRYMSRFQVPPPPRRKRSNM----DREEP--SHRGSSIDRE LQTIPYDDLKRLGIPPPPEGRYMSHYEVPSPPRRKRSSR----DKEES--SHRRSSIDK-	7: 205-206 fgenesh1_pg.scaffold_70000045 6 0 U2 GTATCTTT..GTAG LOC_Os09g33870.1 6 0 U2 GTAGTTCA..ACAG GRMZM2G301536_T01 6 0 U2 GTAGCCTA..ACAG Sb02g029740 6 0 U2 GTAGTTTA..ACAG AT2G43370.1 6 0 U2 GTCTACCA..GCAG Glyma08g48140.1 6 0 U2 GTGTTATT..ACAG Glyma18g53350.1 6 2 U2 GGTGTTGT..TACA GSVIVP00001916001 6 0 U2 GTAAATTA..GCAG fgenesh4_pg.C_scaffold_64000067 6 0 U2 GTATTGTT..TTAG
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	GREVNEHASNKGHGSESGEARERDWHRRRRVDHRDHDEAEQSRSYRKVMVEDRGQEEIPR DSSHYRRYCSPTQDDDSTVSTHRRKGSHDRREETE--RRTRAYISREAGSYSKR------ GVSTYR---RQRSSNDDDETLLKRKSSRDGLEESQSRRSARSSITKEDNRYSSQRKSKEH GVSTYR---RQISSTDDDETPRRRKSSHDGPEESQSRRSTRSSITREDNRYSRQRKSKGH ---------VEREEEFKERSSLRSYHSHRSSAHT-------------------------- ---------RNRTEDSHRSSVDIGEGHCRSSSHRDDHSRGRSSLERS------------- ---------RNKTEDGLRSSVDIEEGHYRSSSHRDNHSRGRSSMERS------------- DRYHKGGSIEGEEHSHEGSSVDREEHSHRRSSIDK-----RSSIDRE------------- ---------EAEESSNIRSYRDKEEHYERGGYHHK-----RSSLDRE-------------	8: 266-266 fgenesh4_pg.C_scaffold_64000067 7 1 U2 GTGAAAGG..CCAG
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	ESKYEGFEFESKRSNPKTFRDDQRTEDTHYGEEAIERKRRREPSHASHEYEE-------- -----------------SPTEDDG------------------------------------ DKGHRKHRRSQDPGEVSPPAEEDGSYERQRTLEEPDRSPDRYHHHWHHRDDTYESRHLRH DEGYHMHRRSQEAGEVSPP-EEGGSYERERTSEEPGRGTDRYHHHRHHTEGTYESRYSHH ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	-ERRQNKRRQAEDSREHSAERSWRYDPQYRAKTNRSSDYHSEKSSEWREAESEQSRSRRD -DRRKRRRSREPGELSPYKEDDDNSK---RGRSSVEPGFSPYQSHHHRHHRERHDSSSHS RDHRKRRRSQEPGEVSPPEEDC-SHE---RERTSDEPGRSPDRYHHHWHQRDGTYESRHS RGHRKRRRSQELGELSPPEEDV-SYE---KERTSDEPGRSPDRYHHHRHHREDTYESRHS -HSSHRRRSKDREECSREESRSDRKE---RAR------GMEDRYGDNKGEVSGSKRSKRS -GRYHDRSSSEKEHRYRSSTDKDKHS---QKR------KESDRSSSEK---EHQYRSSTD -GRYHDRSSSEKEHRHGSSTDKDKHS---QKR------KESDRSSLEK---ERRHRSSTD -ERFHKRSSSDREVRSHKRSSTDLVE------------RSDKRSFIHGEERFHS-RSSMD -EHYEKRSPVDMEEPSHKKLRD----------------REE----------RTHKRSSRD
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	TERWDAHGR-----------------------------DLEPRNRWEEPSDHKKPSRHSE ------------------------------------------------------RHGERR RHRDHRKRRRSQEPGVSPLEEDSSYERERTSDELGRSPDWYHHHRHHREDTYESRHSHHR ---------------------------------------------HHREDTYESRHSHHR ------------------------------------------------------EEDRSR ------------------------------------------------------KDKHSR ------------------------------------------------------KDKHSR ------------------------------------------------------WEEHSH ------------------------------------------------------REEGSR
Pp~fgenesh1_pg.scaffold_70000045 Os~LOC_Os09g33870.1 Zm~GRMZM2G301536_T01 Sb~Sb02g029740 At~AT2G43370.1 Gm~Glyma08g48140.1 Gm~Glyma18g53350.1 Vv~GSVIVP00001916001 Pt~fgenesh4_pg.C_scaffold_64000067	KKHRHSESTHQHRDRDQGYPEEDGIKRHRSHRKHKHRERSVEEKFDIEEMERRKSKDR HQDDRGNHSR---------------NRRSESRDYSH---------------------- DRRRHGDRHR---------------TKRSESRDYRD---------------------- DRRRHGDRHH---------------SKRSESRDYRD---------------------- KRHKHLPSHH---------------HRRSYSQDHHSSD-------------------- KRKESDRSSPEKEHGLRSSTDKDKHHRKRKERDEQS---------------------- KRKERDERSQ---------------RREKYSHHSPHKD-------------------- KSSMDRERHS---------------HKR--HRQY------------------------ KRHKHGSSSD---------------KRRKEDA--------------------------