SRGD Gene ID 981 BLASTp at NCBI n/a n/a  
OrganismsPt ,Gm ,Sb ,Zm ,Vv ,At
Gene count9
Cintron count4
Cintron classesU2 ,GC ,im
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Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Zm~GRMZM2G018020_T01
Sb~estExt_fgenesh1_pg.C_chr_90453
At~AT2G47580.1
Vv~GSVIVP00028024001
Gm~Glyma19g43990.2
Gm~Glyma19g43990.1
Gm~Glyma03g41400.1
Pt~fgenesh4_pm.C_LG_XIV000322
Pt~estExt_fgenesh4_pg.C_LG_II1730
MSGEAAAV-------GGGEGEANGIPPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKIL
MSGEAAAAAVGGGGGGGGEGETNGVQPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKIL
----MEMQ-------EANQGGGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKIL
---------------MAELNTGGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIM
--------------------------------------MLLDAELKKSLNAVFTQFGKIL
---------------MSEVNATPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKIL
---------------MSEVNATPEIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKIL
----------------------------MTIYINNLNEKIKIDELKTSLHAVFSQFGKIL
MADVNNNI-------NNNSSTGTEVSSNMTIYINNLNEKIKIDELKKALHAVFSQFGKIL
1: 42-42
GRMZM2G018020_T01 0 1 U2 GTCTCCTA..GCAG
estExt_fgenesh1_pg.C_chr_90453 0 1 U2 GTCTCTCC..GCAG
AT2G47580.1 0 1 U2 GTACTTAA..ACAG
GSVIVP00028024001 0 1 U2 GTGATTCT..ACAG
Glyma19g43990.1 0 1 GC GCATGCTA..GCAG
Glyma03g41400.1 0 1 U2 GTACGCTA..GCAG
fgenesh4_pm.C_LG_XIV000322 0 1 U2 GTAATGTC..AAAG
estExt_fgenesh4_pg.C_LG_II1730 0 1 U2 GTAATGCC..AAAG
Zm~GRMZM2G018020_T01
Sb~estExt_fgenesh1_pg.C_chr_90453
At~AT2G47580.1
Vv~GSVIVP00028024001
Gm~Glyma19g43990.2
Gm~Glyma19g43990.1
Gm~Glyma03g41400.1
Pt~fgenesh4_pm.C_LG_XIV000322
Pt~estExt_fgenesh4_pg.C_LG_II1730
DVLAFKTLKHKGQAWVVFEDVASATEALKRMQGFPFYDKTMRIQYAKTKSDIIAKADGTF
DVLAFKTLKHKGQAWVVFEDVASATEALKRMQGFPFYDKTMRIQYAKTKSDIVAKADGTF
EILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTF
EVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTF
EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF
EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF
EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF
EILAFKTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTF
EILAFKTLKHKGQAWVVFEDVQSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTF
2: 100-100
GRMZM2G018020_T01 1 0 U2 GTGAGTTT..CCAG
estExt_fgenesh1_pg.C_chr_90453 1 0 U2 GTGAGTTT..TCAG
AT2G47580.1 1 0 U2 GTACCAAT..ACAG
GSVIVP00028024001 1 0 U2 GTAGTTTT..ACAG
Glyma19g43990.2 0 0 U2 GTATCATA..CCAG
Glyma19g43990.1 1 0 U2 GTATCATA..CCAG
Glyma03g41400.1 1 0 U2 GTATCATA..CCAG
fgenesh4_pm.C_LG_XIV000322 1 0 U2 GTATGTAT..GCAG
estExt_fgenesh4_pg.C_LG_II1730 1 0 U2 GTATGCTT..GCAG
Zm~GRMZM2G018020_T01
Sb~estExt_fgenesh1_pg.C_chr_90453
At~AT2G47580.1
Vv~GSVIVP00028024001
Gm~Glyma19g43990.2
Gm~Glyma19g43990.1
Gm~Glyma03g41400.1
Pt~fgenesh4_pm.C_LG_XIV000322
Pt~estExt_fgenesh4_pg.C_LG_II1730
VPRERRKRTDEKSEKKQKREHHHDAGASQIGMGVT-AYPGVYG-APQLTQIPIAGGQRVM
VPRERRKRVDEKPEKKQKREHHHD--ASQIGMGVN-AYPGVYG-APQLTQIPIAGGQRVI
VPREKRKRHEEKGGGKKKKDQHHD--STQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPN
VPRERRRRHDDRAG--RKRREQHD--ANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSA
VPREKRKRHDEKA---KKRKDQHD--SNLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM
VPREKRKRHDEKA---KKRKDQHD--SNLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM
VPREKRKRHDDKA---KKRKDQHD--ANLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM
VPREKRRRHEEKG---KKKKDQHD--ANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSM
VPREKRRRHEEKG---KKKKDQHD--TNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSM
3: 131-131
GRMZM2G018020_T01 2 1 U2 GTAAGATG..GCAG
estExt_fgenesh1_pg.C_chr_90453 2 1 U2 GTAAGATG..CCAG
AT2G47580.1 2 1 U2 GTGACACT..GCAG
GSVIVP00028024001 2 1 U2 GTAATAAT..ACAG
Glyma19g43990.2 1 1 U2 GTATAACA..GCAG
Glyma19g43990.1 2 1 U2 GTATAACA..GCAG
Glyma03g41400.1 2 1 U2 GTATAACA..GCAG
fgenesh4_pm.C_LG_XIV000322 2 1 U2 GTAAGGCA..GCAG
estExt_fgenesh4_pg.C_LG_II1730 2 1 U2 GTAAGATG..GCAG
4: 166-166
GRMZM2G018020_T01 3 0 U2 GTGAGTTA..CCAG
estExt_fgenesh1_pg.C_chr_90453 3 0 U2 GTGAGTTA..CCAG
AT2G47580.1 3 0 U2 GTGAGTTA..ACAG
GSVIVP00028024001 3 0 U2 GTAAGTAT..TCAG
Glyma19g43990.2 2 0 U2 GTAAGTTT..TCAG
Glyma19g43990.1 3 0 U2 GTAAGTTT..TCAG
Glyma03g41400.1 3 0 U2 GTAAGTTT..CCAG
fgenesh4_pm.C_LG_XIV000322 3 0 U2 GTAAGCAT..GCAG
estExt_fgenesh4_pg.C_LG_II1730 3 0 U2 GTAAGCAT..GCAG
Zm~GRMZM2G018020_T01
Sb~estExt_fgenesh1_pg.C_chr_90453
At~AT2G47580.1
Vv~GSVIVP00028024001
Gm~Glyma19g43990.2
Gm~Glyma19g43990.1
Gm~Glyma03g41400.1
Pt~fgenesh4_pm.C_LG_XIV000322
Pt~estExt_fgenesh4_pg.C_LG_II1730
MPEIIV-PNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAKPGIAFVEYGDETQAT
MPEIIV-PNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQAT
MPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQST
VPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQST
VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST
VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST
VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST
VPEAPAPPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQST
VPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQST
Zm~GRMZM2G018020_T01
Sb~estExt_fgenesh1_pg.C_chr_90453
At~AT2G47580.1
Vv~GSVIVP00028024001
Gm~Glyma19g43990.2
Gm~Glyma19g43990.1
Gm~Glyma03g41400.1
Pt~fgenesh4_pm.C_LG_XIV000322
Pt~estExt_fgenesh4_pg.C_LG_II1730
AAMNNLQSFKITKENQMVITYAKK
AAMNNLQSFKITKENQMVITYAKK
VAMQGLQGFKI-QQNQMLITYAKK
VAMQGLQGLKINQQNPMLITYAKK
VAMQTLQGFKITPQNPMLITYAKK
VAMQTLQGFKITPQNPMLITYAKK
VAMQTLQGFKITPQNPMLITYAKK
GAMHGLQGFKILQQNSMLITYAKK
VAMHALQGFKL-QQNSMLITYAKK