SRGD	Gene ID 981	BLASTp at NCBI	n/a	n/a		Organisms Pt ,Gm ,Sb ,Zm ,Vv ,At Gene count 9 Cintron count 4 Cintron classes U2 ,GC ,im
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		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Zm~GRMZM2G018020_T01 Sb~estExt_fgenesh1_pg.C_chr_90453 At~AT2G47580.1 Vv~GSVIVP00028024001 Gm~Glyma19g43990.2 Gm~Glyma19g43990.1 Gm~Glyma03g41400.1 Pt~fgenesh4_pm.C_LG_XIV000322 Pt~estExt_fgenesh4_pg.C_LG_II1730	MSGEAAAV-------GGGEGEANGIPPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKIL MSGEAAAAAVGGGGGGGGEGETNGVQPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKIL ----MEMQ-------EANQGGGSEVSPNQTIYINNLNEKVKLDELKKSLNAVFSQFGKIL ---------------MAELNTGGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIM --------------------------------------MLLDAELKKSLNAVFTQFGKIL ---------------MSEVNATPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKIL ---------------MSEVNATPEIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKIL ----------------------------MTIYINNLNEKIKIDELKTSLHAVFSQFGKIL MADVNNNI-------NNNSSTGTEVSSNMTIYINNLNEKIKIDELKKALHAVFSQFGKIL	1: 42-42 GRMZM2G018020_T01 0 1 U2 GTCTCCTA..GCAG estExt_fgenesh1_pg.C_chr_90453 0 1 U2 GTCTCTCC..GCAG AT2G47580.1 0 1 U2 GTACTTAA..ACAG GSVIVP00028024001 0 1 U2 GTGATTCT..ACAG Glyma19g43990.1 0 1 GC GCATGCTA..GCAG Glyma03g41400.1 0 1 U2 GTACGCTA..GCAG fgenesh4_pm.C_LG_XIV000322 0 1 U2 GTAATGTC..AAAG estExt_fgenesh4_pg.C_LG_II1730 0 1 U2 GTAATGCC..AAAG
Zm~GRMZM2G018020_T01 Sb~estExt_fgenesh1_pg.C_chr_90453 At~AT2G47580.1 Vv~GSVIVP00028024001 Gm~Glyma19g43990.2 Gm~Glyma19g43990.1 Gm~Glyma03g41400.1 Pt~fgenesh4_pm.C_LG_XIV000322 Pt~estExt_fgenesh4_pg.C_LG_II1730	DVLAFKTLKHKGQAWVVFEDVASATEALKRMQGFPFYDKTMRIQYAKTKSDIIAKADGTF DVLAFKTLKHKGQAWVVFEDVASATEALKRMQGFPFYDKTMRIQYAKTKSDIVAKADGTF EILAFKTFKHKGQAWVVFDNTESASTAIAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTF EVLAFKTLKHKGQAWVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTF EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF EVLAFKTLKHKGQAWVVFEDASSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTF EILAFKTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTF EILAFKTLKHKGQAWVVFEDVQSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTF	2: 100-100 GRMZM2G018020_T01 1 0 U2 GTGAGTTT..CCAG estExt_fgenesh1_pg.C_chr_90453 1 0 U2 GTGAGTTT..TCAG AT2G47580.1 1 0 U2 GTACCAAT..ACAG GSVIVP00028024001 1 0 U2 GTAGTTTT..ACAG Glyma19g43990.2 0 0 U2 GTATCATA..CCAG Glyma19g43990.1 1 0 U2 GTATCATA..CCAG Glyma03g41400.1 1 0 U2 GTATCATA..CCAG fgenesh4_pm.C_LG_XIV000322 1 0 U2 GTATGTAT..GCAG estExt_fgenesh4_pg.C_LG_II1730 1 0 U2 GTATGCTT..GCAG
Zm~GRMZM2G018020_T01 Sb~estExt_fgenesh1_pg.C_chr_90453 At~AT2G47580.1 Vv~GSVIVP00028024001 Gm~Glyma19g43990.2 Gm~Glyma19g43990.1 Gm~Glyma03g41400.1 Pt~fgenesh4_pm.C_LG_XIV000322 Pt~estExt_fgenesh4_pg.C_LG_II1730	VPRERRKRTDEKSEKKQKREHHHDAGASQIGMGVT-AYPGVYG-APQLTQIPIAGGQRVM VPRERRKRVDEKPEKKQKREHHHD--ASQIGMGVN-AYPGVYG-APQLTQIPIAGGQRVI VPREKRKRHEEKGGGKKKKDQHHD--STQMGMPMNSAYPGVYGAAPPLSQVPYPGGMKPN VPRERRRRHDDRAG--RKRREQHD--ANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSA VPREKRKRHDEKA---KKRKDQHD--SNLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM VPREKRKRHDEKA---KKRKDQHD--SNLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM VPREKRKRHDDKA---KKRKDQHD--ANLAGMGLNPAYAGAYGAAPA---IAYPGGAKSM VPREKRRRHEEKG---KKKKDQHD--ANQVGVGLTPAYGGAYGTTPSLLQIPYPGGVKSM VPREKRRRHEEKG---KKKKDQHD--TNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSM	3: 131-131 GRMZM2G018020_T01 2 1 U2 GTAAGATG..GCAG estExt_fgenesh1_pg.C_chr_90453 2 1 U2 GTAAGATG..CCAG AT2G47580.1 2 1 U2 GTGACACT..GCAG GSVIVP00028024001 2 1 U2 GTAATAAT..ACAG Glyma19g43990.2 1 1 U2 GTATAACA..GCAG Glyma19g43990.1 2 1 U2 GTATAACA..GCAG Glyma03g41400.1 2 1 U2 GTATAACA..GCAG fgenesh4_pm.C_LG_XIV000322 2 1 U2 GTAAGGCA..GCAG estExt_fgenesh4_pg.C_LG_II1730 2 1 U2 GTAAGATG..GCAG 4: 166-166 GRMZM2G018020_T01 3 0 U2 GTGAGTTA..CCAG estExt_fgenesh1_pg.C_chr_90453 3 0 U2 GTGAGTTA..CCAG AT2G47580.1 3 0 U2 GTGAGTTA..ACAG GSVIVP00028024001 3 0 U2 GTAAGTAT..TCAG Glyma19g43990.2 2 0 U2 GTAAGTTT..TCAG Glyma19g43990.1 3 0 U2 GTAAGTTT..TCAG Glyma03g41400.1 3 0 U2 GTAAGTTT..CCAG fgenesh4_pm.C_LG_XIV000322 3 0 U2 GTAAGCAT..GCAG estExt_fgenesh4_pg.C_LG_II1730 3 0 U2 GTAAGCAT..GCAG
Zm~GRMZM2G018020_T01 Sb~estExt_fgenesh1_pg.C_chr_90453 At~AT2G47580.1 Vv~GSVIVP00028024001 Gm~Glyma19g43990.2 Gm~Glyma19g43990.1 Gm~Glyma03g41400.1 Pt~fgenesh4_pm.C_LG_XIV000322 Pt~estExt_fgenesh4_pg.C_LG_II1730	MPEIIV-PNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAKPGIAFVEYGDETQAT MPEIIV-PNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQAT MPEAPAPPNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPGIAFVEFADEMQST VPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQST VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST VPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQST VPEAPAPPNNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQST VPEAPAPPNNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQST
Zm~GRMZM2G018020_T01 Sb~estExt_fgenesh1_pg.C_chr_90453 At~AT2G47580.1 Vv~GSVIVP00028024001 Gm~Glyma19g43990.2 Gm~Glyma19g43990.1 Gm~Glyma03g41400.1 Pt~fgenesh4_pm.C_LG_XIV000322 Pt~estExt_fgenesh4_pg.C_LG_II1730	AAMNNLQSFKITKENQMVITYAKK AAMNNLQSFKITKENQMVITYAKK VAMQGLQGFKI-QQNQMLITYAKK VAMQGLQGLKINQQNPMLITYAKK VAMQTLQGFKITPQNPMLITYAKK VAMQTLQGFKITPQNPMLITYAKK VAMQTLQGFKITPQNPMLITYAKK GAMHGLQGFKILQQNSMLITYAKK VAMHALQGFKL-QQNSMLITYAKK