SRGD Gene ID 977 BLASTp at NCBI n/a n/a  
OrganismsAt ,Pp ,Vv ,Sb ,Pt ,Os ,Gm
Gene count9
Cintron count16
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_3600017
Os~LOC_Os03g15480.1
Sb~estExt_fgenesh1_kg.C_chr_10473
At~AT5G22080.1
Gm~Glyma12g31530.1
Gm~Glyma13g38860.1
Vv~GSVIVP00007486001
Pt~estExt_fgenesh4_pg.C_LG_IX1388
Pt~estExt_fgenesh4_pm.C_LG_I0582
 ------------------------------------------------------MVTASD
MSLVSSEHKKSGPSVPSPTPVSPLSVALSLHATRSLVSSRRPPGATAFRPPSMASTDADE
------------------------------------------------MG----SSEADE
------------------------------------------------MG----EVKVDD
------------------------------------------------MGDTNHASTVDD
------------------------------------------------MGDTNHASTVDD
----------------------------------------------------MTTTASEE
------------------------------------------------MGDTRSSATAYD
------------------------------------------------MGEA-SSTTAYD
2: 48-48
AT5G22080.1 0 0 U2 ..
Pp~estExt_fgenesh1_pg.C_3600017
Os~LOC_Os03g15480.1
Sb~estExt_fgenesh1_kg.C_chr_10473
At~AT5G22080.1
Gm~Glyma12g31530.1
Gm~Glyma13g38860.1
Vv~GSVIVP00007486001
Pt~estExt_fgenesh4_pg.C_LG_IX1388
Pt~estExt_fgenesh4_pm.C_LG_I0582
 DALLKEFFAEVSDVERDNEVLRVLGCFKLNPFEHLNLPFDSDIDEVRRQYRKLSLLIHPD
DQLLKSFLAEVSEAERDNEVLRILGCFKLNPFEHLKLSFDSSADEVKKQYRKLSLLVHPD
DQLLKSFLAEVSEAERDNEVLRILGCFKLNPFEHLKLSFDSSPDEVKKQYRKLSLLVHPD
DAILKSFLAEVGEVERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMVHPD
DLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEYLNLPFDSSIDDVKKQYRKLSLMVHPD
DLLLKNFFAEVSEVERDNEVLRILSCFKLNPFEYLNLSFDSSIDDVKKQYRKLSLMVHPD
DLLLKNFFAEVSEVERDNEVVRILACFKLNAFEYLNIPFDSSPDDVKKQYRKLSLLVHPD
DLLLKSFFAEVSEVERDNEVARILSCFKLNPFEYLNLPFEASPEDLKKQYRKLSLLVHPD
DMLLKSFFAEVSEVERDNEVTRILSCFKLNPFEYLNLPFEASPEDIKKQYRKLSLLVHPD
3: 80-80
LOC_Os03g15480.1 0 2 U2 GTAAATCC..TCAG
estExt_fgenesh1_kg.C_chr_10473 0 2 U2 GTCTTCTT..TCAG
Glyma12g31530.1 0 2 U2 GTGCTTCT..ACAG
Glyma13g38860.1 0 2 U2 GTACTTTT..ACAG
estExt_fgenesh4_pg.C_LG_IX1388 0 2 U2 GTCTCTCC..TTAG
estExt_fgenesh4_pm.C_LG_I0582 0 2 U2 GTCTCTCT..TTAG
4: 111-111
LOC_Os03g15480.1 1 0 U2 GTATTGAG..GTAG
estExt_fgenesh1_kg.C_chr_10473 1 0 U2 GTATAAAG..GCAG
Glyma12g31530.1 1 0 U2 GTAATGTC..GTAG
Glyma13g38860.1 1 0 U2 GTAATGTC..GTAG
estExt_fgenesh4_pg.C_LG_IX1388 1 0 U2 GTAACTGT..GCAG
estExt_fgenesh4_pm.C_LG_I0582 1 0 U2 GTAATTAT..GCAG
Pp~estExt_fgenesh1_pg.C_3600017
Os~LOC_Os03g15480.1
Sb~estExt_fgenesh1_kg.C_chr_10473
At~AT5G22080.1
Gm~Glyma12g31530.1
Gm~Glyma13g38860.1
Vv~GSVIVP00007486001
Pt~estExt_fgenesh4_pg.C_LG_IX1388
Pt~estExt_fgenesh4_pm.C_LG_I0582
 KCKHPRANEAFAALAKAQQLLLDPAERDYIVSQINSARDELRSERRKKLKRDNASKIKSM
KCKHPKAQEAFAALAKAQQLLLDPQERGYILDQVTAAKEELRAKRKKELKKDSASKIKSQ
KCKHPQAQEAFAALAKAQQLLLDPQERGYILDQVTAAKEELRAKRKKELKKDSASKIKSL
KCKHPQAQEAFGALAKAQQLLLNDQERDYILTQVHAAKEELKMKRKKQLKKDTASKIKSL
KCKHPQAKEAFGALAKAQQLLMDQNERDYILSQVNSAKEELRAKRKKQLKKDTASKMKSL
KCKHPQAKEAFGALAKAQQLLLDQNERDYILSQVNSAKEELRAKRKKQLKKDTASKMKSL
KCKHPQAKEAFGALAKAQQLLLDPQEREYLLSQVNAAKEELRAMRKKQLKKDNASKIKSL
KCKHPQAKEAFAALAKAQKLLLDEQERDYVLTQVNAAKEELRAKRKKRLKKDTASKIKSL
KCKHPQAKEAFGALAKAQQLLLEEQERDYVLTQVNAAKEELRAKRKKQLRKDTASKIKSL
5: 131-131
LOC_Os03g15480.1 2 1 U2 GTATGCAA..ACAG
estExt_fgenesh1_kg.C_chr_10473 2 1 U2 GTACTGAA..ATAG
Glyma12g31530.1 2 1 U2 GTACATGA..GCAG
Glyma13g38860.1 2 1 U2 GTACATGA..GCAG
estExt_fgenesh4_pg.C_LG_IX1388 2 1 U2 GTAAATTA..GCAG
estExt_fgenesh4_pm.C_LG_I0582 2 1 U2 GTAAATTT..GCAG
6: 157-157
LOC_Os03g15480.1 3 1 U2 GTGCAATG..TCAG
estExt_fgenesh1_kg.C_chr_10473 3 1 U2 GTGTGAAT..ACAG
Glyma12g31530.1 3 1 U2 GTTAGTGT..GCAG
Glyma13g38860.1 3 1 U2 GTTAGTGT..GCAG
estExt_fgenesh4_pg.C_LG_IX1388 3 1 U2 GTTAGTGC..GCAG
estExt_fgenesh4_pm.C_LG_I0582 3 1 U2 GTTAGTGC..GCAG
Pp~estExt_fgenesh1_pg.C_3600017
Os~LOC_Os03g15480.1
Sb~estExt_fgenesh1_kg.C_chr_10473
At~AT5G22080.1
Gm~Glyma12g31530.1
Gm~Glyma13g38860.1
Vv~GSVIVP00007486001
Pt~estExt_fgenesh4_pg.C_LG_IX1388
Pt~estExt_fgenesh4_pm.C_LG_I0582
 VDEGKFENQFEQSDEFRQAWKKRVREMLTEQEWRRRKLTMRISEEEGRVKKEEEETREMW
VDEGKYEEQYERSEEFQKQLIIKVREILTDKEWRRRKMQMRISEEEGRLKKDEEETKEMW
VDEGKYEEQFERSDEFQQQLIIKVREILTDKEWRRRKMQMRISEEEGRLKKDEEETKEMW
VDEGKHEHIYEQSEEFQKELKLKVREILTDQEWRRRKMAMRISEEEGRLKKDEAEQKEIW
VEEGKYDKQYEQSEEFRQELKVKVRELLTEQEWRRRKMQMRISEEEGRLKRDEEEQKEMW
VEEGKYDKQYEQSEEFRQELKVKVRELLTEQEWRRRKMQMRISEEEGRLKRDEEEQKEMW
VDEGKYEQEYERSEEFQKQLKLKVRELLTEQEWRRRKMQMRISEEEGRLKKDEEDTKEMW
VDEGKYDQQYEWSEEFQQELKLKVREILTDQEWRRRKMQMRISEEEGRLKKDEEEQKETW
VDEGKYDQQYEQSEEFQRELKLKVREILTDQEWRRRKMQMRISEEEGRLKKDEEEQKEMW
7: 182-182
LOC_Os03g15480.1 4 0 U2 GTAAGACA..GTAG
estExt_fgenesh1_kg.C_chr_10473 4 0 U2 GTAAGAGA..GCAG
Glyma12g31530.1 4 0 U2 GTATGTAT..TCAG
Glyma13g38860.1 4 0 U2 GTTTGTAT..TCAG
estExt_fgenesh4_pg.C_LG_IX1388 4 0 U2 GTCTGTGA..ACAG
estExt_fgenesh4_pm.C_LG_I0582 4 0 U2 GTCTGTGA..ACAG
8: 220-220
LOC_Os03g15480.1 5 0 U2 GTAAATAA..ACAG
estExt_fgenesh1_kg.C_chr_10473 5 0 U2 GTAGAGTA..ACAG
Glyma12g31530.1 5 0 U2 GTATGCTC..GTAG
Glyma13g38860.1 5 0 U2 GTATGCTC..GTAG
estExt_fgenesh4_pg.C_LG_IX1388 5 0 U2 GTATGCTG..TTAG
estExt_fgenesh4_pm.C_LG_I0582 5 0 U2 GTATGTTG..TTAG
Pp~estExt_fgenesh1_pg.C_3600017
Os~LOC_Os03g15480.1
Sb~estExt_fgenesh1_kg.C_chr_10473
At~AT5G22080.1
Gm~Glyma12g31530.1
Gm~Glyma13g38860.1
Vv~GSVIVP00007486001
Pt~estExt_fgenesh4_pg.C_LG_IX1388
Pt~estExt_fgenesh4_pm.C_LG_I0582
 KHKREHEEKWEETRENRVSSWRNFQKGGKKTKKGELRPPKLKTEDPNKSYVQRPVKKG
KKKREHEEKWEETRDQRVSSWRDFMKTGKKARKGEIKPPKLKTEDPNKSYVQRPVKRA
KRKREHEEKWEETRDQRVSSWRDFMKTGKKGRKGEIKPPKLKTEDPNKSYVQRPVKRN
KKKREHEEQWEGTREKRVSSWRDFQKAGKKAKKGETRPPKLKTEDPNKSYVQRPVKKG
KRKREHEEEWEGTREKRVSSWRDFMKGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG
KRKREHEEEWEGTREKRVSSWRDFMKGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG
KRKREHEEQWEGTREQRVSSWRDFMKTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG
KRKREHEEQWEGTREKRVSSWRDFMKTGKKGKKGETRPPKLKTEDPNKSYVQRPVKRG
KRKREHEEQWEGTREKRVSSWRDFMKTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG
9: 256-256
LOC_Os03g15480.1 6 0 U2 GTAAGCTC..GTAG
estExt_fgenesh1_kg.C_chr_10473 6 0 U2 GTATGTTT..GTAG
Glyma12g31530.1 6 0 U2 GTCAGTTT..TCAG
Glyma13g38860.1 6 0 U2 GTTAGTTT..TCAG
estExt_fgenesh4_pg.C_LG_IX1388 6 0 U2 GTTTGTTT..TCAG
estExt_fgenesh4_pm.C_LG_I0582 6 0 U2 GTTTGTTC..TCAG
10: 269-269
LOC_Os03g15480.1 7 0 U2 GTTAGAGA..ATAG
estExt_fgenesh1_kg.C_chr_10473 7 0 U2 GTTAGTGC..GCAG
Glyma12g31530.1 7 0 U2 GTGAGATG..GCAG
Glyma13g38860.1 7 0 U2 GTGAGATA..GCAG
estExt_fgenesh4_pg.C_LG_IX1388 7 0 U2 GTGAGACT..GCAG
estExt_fgenesh4_pm.C_LG_I0582 7 0 U2 GTGAGAAT..GCAG