SRGD Gene ID 871 BLASTp at NCBI n/a n/a  
OrganismsOs ,At ,Gm ,Vv ,Lj ,Pt ,Sb ,Zm ,Pp
Gene count10
Cintron count17
Cintron classesU2 ,absent ,im ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
------------------------------------------------------------
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MSLVWNLVQPIEIVNFGPNWNRNRPVLKFPFTPQPGTNTLCRTLRIEGWTTRPRGGGSTR
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
PVALTRPARRRRTARRRPSPLPSPRAFAGAGRRKRSRWITSWAGKSERPGCTKSCLGTVT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
-----------------------------------------------------------M
------------------------------------------MATKQQDAST-----SGA
------------------------------------------MATKQQDAST-----SGA
ALELIPCCRTGPKLEPVQAGGQLAADWGSGTASPDARRGLSAMAARQPPPSSASAPAPAA
------------------------------------------MAARQPPPSSAS--APAA
---------------------------------------------------------MAG
----------------------------------------------------------MG
----------------------------------------------------------MG
-----------------------------------------------------------G
---------------------------------------------------------MAA
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
ATSLKDYLKKYQSVGEDD---NKQPKKTKKKRKVAQVKVPVGLVIVDNDAAWQKTIDEDS
AMSMKEYLKRYQSDDAQG-----KAKKKKKKKPKPAAAVGGGVLIVDEDPTWHKPVQIEE
AMSMKEYLKRYQSDDAQG-----KAKKKKKKKPKPAAAVGGGVLIVDEDPTWHKPVQIEE
GLSMKDYLKRYVSGPGTD-GDQKRAKKKTKKKPKPAG----GVLIVDEDPVWQKPVQVDE
GLSMKEYLKRYQSGPGAD-GDQKKAKKKTKKKPKPTAG-GGGVLIVDEDPVWQKPVQVEE
NQSLKDYLKKYESSDVVE---KKKKKKKQKKPSKPEPR---GVLVVDEDPVWQKQVDPEE
SNSLKDYLKRYESNTEEE--KKKNKKKKQKKKSQPQAT---GLLVVDEDPTWQKPIDLGE
SNSLKDYLKRYESNTEEEKKKKKKKKKKQKKKSQPQAT---GLLVVDEDPTWQKPVDLGE
SKSLKEYLKKYGSDNQEE----EKKVKKKKKKVKPNAS---GVLVVDEDPVWQKPVKLEE
STSLKEYLKRYESNNEEE----TKKKKKKKKKTKPDVS---GVLVVDEDPTWQKPVKLEE
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
DEPE-VEGIDAPQVIEDVEVKRMHQMERIKQHRPYMSIGDDGSGWSTV---ERKPKNVEL
EPA--SSGDERPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDSDGGLTG
EPA--SSGDERPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDSDGGLTG
EPA--SSGDDKPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEEQGGGST-
EPA--SSGDEKPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEEQGGGST-
DENEDDSAEETPLVDEDIEVKRMRRLEEIKARRAHNAIAEDGSGWVTLP-----LNRED-
ENNDNSSDEEKPLIDEDIEVKRMKRLEQVRARRPYHAISEDGSGWVSLS--SNSENPIN-
ENDDNSSDEEKPVVDEDIEVKRMKRLEQSRARHHYNAISEDGSGWVSLS--SESTNPCN-
EEND-SADDENPQVDEDIEVKRMKRLELIRARRAYNAIAEDGSGWVILP--PNHANSAD-
EHDD-SADEEKPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHSDSGD-
2: 246-247
LOC_Os08g08080.1 1 1 U2 GTACGCGA..GCAG
LOC_Os08g08080.2 1 1 U2 GTACGCGA..GCAG
Sb10g002430 0 1 U2 GTGCGTTG..GCAG
AT1G31870.1 1 1 U2 GTAAATTG..ATAG
Glyma07g07730.1 1 1 U2 GTATATAA..GTAG
chr5.CM0095.210.nd 0 1 U2 GTAAATAC..ATAG
gw1.118.149.1 0 1 U2 GTAAAAAA..GTAG
GSVIVP00015807001 1 1 U2 GTAAAAAA..GTAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
KGQRDDTLRL------GSPDISPPRRNP---------------------------SSQSQ
RRRRNDTPSPERGGA-GRKDLSPPRRRQ-----------RQDTPSPDPR------DAAGK
RRRRNDTPSPERGGA-GRKDLSPPRRRQ-----------RQDTPSPDPR------DAAGK
HQRRNDTPLPERGRAPTREDLSPVRRRQ-----------RRDTPSPVHG------DAAAK
RQLRNDTPSPEQGGA-VREDLSPVRRRQ-----------RRDTPSPVQG------DAAGK
----------------TQSNISPPRRQR----------TRNDSPSPEPGPRRSVADRVDT
----------------SINDMSPPRKRKGADLSPHQQLKRNDTPSPDYG------TSDLQ
----------------SNNDISPPRKRR----------VRNDTPSPEPELNPSTSNRKSA
----------------PYPDMSPLHKRK----------VRNDTPSPEHEGKPLHNGGDDA
----------------QNSDVSPPRRQR----------ARYDTPSPEPEPRPSDSGREGS
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
DISPPRRRNSRPGSPD-------------------------ASPPRKQSQVES--EDISP
DLSPPRQRRRRQDTPS-------------------------P----KGSEVAGGHDDLSP
DLSPPRQRRRRQDTPS-------------------------P----KGSEVAGGHDDLSP
DFSPPRR-------PS-------------------------PVHGDAAAK------DFSP
DLSPPRQRRRRQDTPS-------------------------P----KGSG-AGDQDDMSP
DMSPPRRR-KRHNSPS-------------------------PEPNRKHTKPVSLDSDMSP
DISPPRRR-GRHDSPS-------------------------QDALHGSVA-----SDLSP
DLSPPHRQLKRNDTPS-------------------------PDHYSQPENSEGLNSDLSP
DLSPPRQQQRQHHSPSPAPDTNLNSDLSPPRNRRYRNDTPSPEPRLKPSREA---SDLSP
DLSPPRQRQRRYHTPS-------------------------PEPGSKPSG-----SDFSP
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
PRRRNMRAESP--DASPPRKRSQVESEDISPPRRRNARAGS--PDTSPPRRRYQ---VES
PRKSRQQRDPS--PPRRLSRHDSKESQDISPPRRRTRHDSEEPQDLSPPRRKGRHDSEEP
PRKSRQQRDPS--PPRRLSRHDSKESQDISPPRRRTRHDSEEPQDLSPPRRKGRHDSEEP
PRRRQRRNTPS-------PVHGDAAAKDFSPPRRRQR------RDTPSPVPDG----AAA
PRKSRRKKDPS--PPRKGARHISEEPQDTSPPRRRRRHDSEEPQDTLLPRRRVRHDSVES
PRKRKARNDSP--SPEPEAKY---LSEDLSPPRRRHVHSPS--RESSRKRSDSV---ELD
PRK--IQKNAP--RPGLSNISHSRSPQHLSPPRRGRHDYET----------------SDL
PRKRRVQSVTVSEVHESMSSKSKFEDTDLSPPRLQHKDSGK--RNYETS---------DL
PRRQQKHHHSPSPKPYTKSKHTSVLNSDLSPPRRRRTDTES--PKLKPL--------KED
SRRPRRQTSADVERKNSDSPH----FPHISSPRRVGRSSEH-------------------
3: 456-456
chr5.CM0095.210.nd 1 1 U2 GTATATTC..GAAG
4: 473-473
fgenesh1_pm.scaffold_74000006 0 0 U2 GTAGAGTC..CCAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
EDISPPRRRKARADSP-----------DASPPRRPPAKL----------------RDISP
KDLLPPWRRV-RHDSEEP--------KDLSPPRRRTRHDSE------------EPEDLSP
KDLLPPWRRV-RHDSEEP--------KDLSPPRRRTRHDSE------------EPEDLSP
KDFSPPRRRQRRQDTPSPKDSGAADQDDMSPPRKSRQR-----------------EDLSP
EDISPPRRRT-RQDSEGP--------EDISPPRRSKHQDP---------------EDISP
DDLSPPRRKRDLHGSPVSDVKKKS--NDLSPPRRRRYHSPSPEPARRSSKSFGSNADLSP
QDISPPRRG--RHDSPSEDVSHRSVASDLSPPRKNQ-------------------KKVER
QDLSPPRRG--RHDSPTIDNLHGSAALDLSPPRKSQ-------------------KNVAR
TDLSPPRQQRRRHYTPSPKPE-----PDLSPPRKRK-------------------KDVGR
--------------------------QDLSPPRKRR-------------------KGLGL
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
TRRKKSRADFQD---SPLRRTSR----------SQSEDISPPRKKKPRTDSS------PR
PRRRTRHDSHEPKDKLPPLKRQA----------LGDGDISPPR--KGRKEVA--------
PRRRTRHDSHEPKDKLPPLKRQA----------LGDGDISPPR--KGRKEVA--------
PRKGARHITEEPRDISPRKKR----------------DISPSR--KSTKEGA--------
PRRRKHQD---PEDISPPRRRKH----------QDPEDISPPR--RSKKERA--------
PGRNINMKDSQDSDLSPQRKAADLRRSSENVSRSSNFDSSPPR--RPRRDSS------PP
LGLSDLSHRHSPQDLSPPRRGRHDSPSRDALHGSSVSDLSPPR--KIQKNVARLGSKNPK
SSSYDHSH------LPPPSRSVK-----VDSNRSLDPDLSPPR--KNSKELS------IP
SGLPDNSH------LSLQLSTQS-----GNSRASMAQDISPPR--KNRKESS------DP
SGSP---------DISPPRRSTQ----------TDTPDLSPPR--KSRKDVS--------
5: 585-585
Sb10g002430 1 2 U2 GACGCACC..ATAG
6: 594-594
Glyma07g07730.1 2 2 U2 GTCTGATC..CAAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
RRVAEQVLSPNVGLITDKAERVAELAKKKQEDARRLKEMGGG--GRAAETVYRDK-RGKR
--PKEVRKA---GLMTAEEVK-EDIRKIKEDERLKFAAQDPSVIGKGAKAVFRDK-QGKR
--PKEVRKA---GLMTAEEVK-EDIRKIKEDERLKFAAQDPSVIGKGAKAVFRDK-QGKR
--SKQVKKS---GLMTAEEVK-EDIRKIKEAEMIKFASQDPSLVGKGAKAVFRDK-EGRR
--SKHVMKA---GLMTAEEVK-EDIRKIKETEMAKFASQDPSLVGKGAKAVFRDK-EGRR
QISKEQRKT---GLISGKDIG-SEYRKKKEDEKLRFKNMDSELTGQNAEAVFRDKITGKR
ELSNPAGKT---GLISGKDIR-DEIDRKKRDDMLRFKQMDPSISGRGAEPVYRDKVKGVR
-ASVNERKT---GLLSSKDIR-NEIDKKKKDDMLRFKQMDPSISGRSAEPVYRDKVKGTR
VSSKEPPKT---GLITGRDMR-EEIKTKKEASLL-FDKMDPSISGRGVEPVYRDKKTGYR
-SSKEPSKT---GLISGKDIG-ELNAKTKKNDWLRFKEMDPLISGRGAEPVYRDKRKGDR
7: 611-611
fgenesh1_pm.scaffold_74000006 1 1 U2 GTCGCAAA..GCAG
8: 632-633
LOC_Os08g08080.1 2 2 U2 GTGAGTAG..ATAG
LOC_Os08g08080.2 2 2 U2 GTGAGTAG..ATAG
Sb10g002430 2 2 U2 GTGAGTGA..TTAG
AT1G31870.1 2 2 U2 GTAATTAT..ACAG
Glyma07g07730.1 3 2 U2 GTAATTGT..GCAG
chr5.CM0095.210.nd 2 2 U2 GTAATTGT..ACAG
gw1.118.149.1 1 2 U2 GTAAGTTC..GCAG
GSVIVP00015807001 2 2 U2 GTAATTGA..GAAG
9: 656-657
LOC_Os08g08080.1 3 1 U2 GTATGCAC..CCAG
LOC_Os08g08080.2 3 1 U2 GTATGCAC..CCAG
Sb10g002430 3 1 U2 GTATAGGA..CCAG
AT1G31870.1 3 1 U2 GTGAGGAC..GCAG
Glyma07g07730.1 4 1 U2 GTCAGAAT..GCAG
chr5.CM0095.210.nd 3 1 U2 GTTAGGAA..GCAG
gw1.118.149.1 2 2 U2 GTGAACCC..AAAG
GSVIVP00015807001 3 1 U2 GTGCTGGG..GCAG
10: 658-658
gw1.118.149.1 3 0 U2 GTCCTAAG..AGAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
LEGLEELLRQQQ--GEAKPEVKPLEWGKGLAQKRETEERHAEFEAEKNKPFARTRDDPEY
ISE-EDMRKAKE---DTKPKEIHIEWGKGLVQKREAEARLQELESEKSKPFARTRDDPEL
ISE-EDMRKAKE---DTKPKEIHIEWGKGLVQKREAEARLQELESEKR------------
ISE-EEMCKAKE---PEKPKEIHIEWGKGLVQKREAESRLKEIEAEKSKPFARTRDDPEL
ISE-EEMRKAKE---PEKPKEIHIEWGKGLVQKREAEARLKEIEAEKKKPFARTRDDPEL
ISK-EEYLKSKQKKVIEKPKEIKLEWGKGLAQKREAEARLQELELEKDKPFARTRDDPEL
ISK-EEYLKSKQ-KVEEKPKEIEIEWGKGLAQKREAEARLKELELEKEKPFARTRDDPEL
ISK-EEYLKSKQ-KVDEKAKAIEIEWGKGLAQKREAEAKLKELELEKEKPFAR-------
ISK-DDYLKSKQ-KVEEKPKEKKLEWGKGLAQKREVETRLEELELEKDKPFARTRDDPEL
ISK-EEFLKSQK--GEEKPKEKKLEWGKGLAQKREAETKQQELELEKDKPFARTRDDPEL
11: 679-679
LOC_Os08g08080.1 4 0 U2 GTAAATAA..GCAG
LOC_Os08g08080.2 4 0 U2 GTAAATAA..GCAG
Sb10g002430 4 0 U2 GTAGATAG..GCAG
AT1G31870.1 4 0 U2 GTACTGTG..GTAG
Glyma07g07730.1 5 0 U2 GTATTTTG..TCAG
chr5.CM0095.210.nd 4 0 U2 GTATTTTG..TCAG
gw1.118.149.1 4 0 U2 GTACTATT..TCAG
GSVIVP00015807001 4 0 U2 GTACCTCT..CCAG
12: 706-706
LOC_Os08g08080.2 5 1 U2 GTAAGCCA..GTAG
13: 713-713
LOC_Os08g08080.1 5 2 U2 GTATTTAA..GTAG
Sb10g002430 5 2 U2 GTACTTAG..GCAG
AT1G31870.1 5 2 U2 GTACTTTA..TCAG
Glyma07g07730.1 6 2 U2 GTATACAT..TCAG
gw1.118.149.1 5 2 U2 GTAAGACT..ACAG
GSVIVP00015807001 5 2 U2 GTAAAGCT..GCAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
DKMFKERLRWGDPMAHLVKRKDPAAELVDFGASDEMKESGFIIPQDIPAHSWLKRGVGAP
DTMLKNRIRWGDPMAHLVKRNDTDLLLEDLGDDEKMKESGFIVPQNIPSHSWLKRGVDPP
-----------------------------------------MILSSTPC-----------
DNMLKERIRWGDPMAHLVKRKDPEFILEDLGDDEKMKESGFIVPQSIPTHSWLKRGVDAP
DNMLKERIRWGDPMAHLVKRKDPEFILEDLGDDEKMKESGFIVPQNVPPHSWLKRGVDAP
DQMMKERVRFGDPMAHLVKKRKYETTLVDLGDDEEMKKSGFIIPQSVPKHSWLTRRLEAA
DKMLKERLRWGDPMAHLVKKKYPEPVLPNLGENEKMKESGFVIPQDIPNHSWLKRGLDAA
------------------------------------------------------------
DKMLMERVRWGDPMAHLVKKKHSELDLADLGDSEKMKESGFIIPQDIPSHSWIKRGLDAA
DKILKDRVRWGDPMAHLVKRKNSELILPDLGDGEKMKESGFIIPQEIPSHSWIKRGLDAA
14: 738-738
LOC_Os08g08080.1 6 0 U2 GTAGCTGC..GCAG
Sb10g002430 6 0 U2 GTAACTGC..GCAG
AT1G31870.1 6 0 U2 GTATTGAA..GCAG
Glyma07g07730.1 7 0 U2 GTAATGCT..GCAG
gw1.118.149.1 6 0 U2 GTGATTAG..ACAG
GSVIVP00015807001 6 0 U2 GTAATCAA..TCAG
Pp~fgenesh1_pm.scaffold_74000006
Os~LOC_Os08g08080.1
Os~LOC_Os08g08080.2
Zm~GRMZM2G102964_T01
Sb~Sb10g002430
At~AT1G31870.1
Gm~Glyma07g07730.1
Lj~chr5.CM0095.210.nd
Pt~gw1.118.149.1
Vv~GSVIVP00015807001
MNRYGIKPGRHWDGVDRSTGFENQMFKAKAEKQATEMEAYLWSVADM
PNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQATEQEAYLWSVADM
-----------------------------------------------
PNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQAMEQEAYLWSVSDM
PNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQAMEQEAYLWSVSDM
SNRYGIKPGRHWDGVDRSNGTEKDLIKKTNERKATEIEAYLWSVADM
PNRYGIRPGRHWDGVDRSNGFEKDMFKRTNEKQARDREAYLWSVSDM
-----------------------------------------------
PNRYGIRPGRHWDGVDRSNGYEKQLVKRVNEKQATEREAYLWSVSDM
PNRYGIRPGRHWDGVDRSTGFEKQMFKRTNEKQATEREAYLWSVADM
15: 798-798
LOC_Os08g08080.1 7 1 U2 GTATGTGC..ACAG
Sb10g002430 7 1 U2 GTACGTTC..CCAG
AT1G31870.1 7 1 U2 GTAAGCTC..TCAG
Glyma07g07730.1 8 1 U2 GTGGGTTC..GTAG
gw1.118.149.1 7 1 U2 GTAAGTTA..GTAG
GSVIVP00015807001 7 1 U2 GTTGGTTG..GTAG


3' UTR introns