SRGD Gene ID 870 BLASTp at NCBI n/a n/a  
OrganismsAt ,Mt ,Lj ,Vv ,Pt ,Gm
Gene count10
Cintron count12
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
MQTPNNNGSTDSVLPPTSAGTTPPPPLQQSTPPPQQQQQQQW----QQ----QQQWMAAM
MQTTNGSDST------------LATSGATPPNQQTPPPPQQWQQQQQQ----QQQWMAAM
MAAQTNGGD-------------LNQNQNQNQNQHQQQQQQQW-AQQQPHQY-QQQWM-SM
MAAQTNGGD-------------LNQNQNQNQNQHQQQQQQQW-AQQQPHQY-QQQWM-SM
MAQPSNGSAD------------LNQN-----APPQQQQPQQW-AAQQPNQYQQQQWM-AM
MAQPSSNGDL--------------NNNQQQGQVQQQQQQGQWAAAAQPHQY-QQQWM-AM
MAQPSSNG-----------------DLNNNQQGQVQQQQQQW-AAAQPHQY-QQQWM-AM
--------------------------------------------------------M-AM
-----------------------------------------------------------M
------------------------------MQQQQQQQQQQ-----------QQQWMAAM
2: 0-0
AT1G49600.1 4 0 U2 ..
AT3G19130.1 0 0 U2 ..
AC127168_20.2 4 0 U2 ..
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
QQY-PAAAMAMMQQQQMMMYPHP---QYAPYNQA-AYQQHPQF-----------QYAAYQ
-QYPPAAAMMMMQQQQMLMYPH----QYVPYNQG-PYQQHHPQLH---------QYGSYQ
-QY-PATAMAMM-QQQMMMYPQ----HYMPYVHPHHYQQQPPHQQQVS------PPPSAH
-QY-PATAMAMM-QQQMMMYPQ----HYMPYVHPHHYQQQPPHQQQVS------PPPSAH
-QY-PATAMAMM-QQQMMMYPQ----HYMPYVHH-HYQPHHQQQKAAAAAAGAVPQQQHQ
-QY-PATAMAMM-QQQMLMYPQ----HYMPYAHP-HYPPPPP------------PPPSSH
-QY-PATAMAMM-QQQMMMYPQ----HYMPYAHP-HYPPPPP------------PPQSSH
-QY-PAAAMVM---QHQMMYPQ----HYMPYHHP-Q------------------PPQQYQ
-QY-PAAAMAMM-QQQMMMYPHQQHHHYMAYYQQ-QQHQHQ-------------QYQNKQ
-QY-PAAAMVMM-QQQMMMYPQQQHHHYMAYYHQ-QQQ----------------QYQKQQ
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
QQQQQHHQSQQQPRGGS--GGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNK
QHQ--HQQH--KAIDRG--SGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNK
SHHGGHQQHQYQQHQQKQLAPEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNK
SHHGGHQQHQYQQHQQKQLAPEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNK
QHH--HQQQQKQQQGGG--GGDEIRTIWLGDLHHWMDENYVHNCFAHTGEVVSAKVIRNK
HHH--HHK-----QAAA--SSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNK
HHH--HKQAAAAAAAAA--SSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNK
NQPPQHQMH-------G--STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNK
QQY--HQKQQKQLQQQG--SNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNK
QQY--HQKQQKQLQQQG--SNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNK
4: 169-169
chr4.CM0079.170.nc 0 0 U2 GTTTGCTT..GCAG
Glyma02g15190.1 0 0 U2 GTACCTTG..GCAG
Glyma07g33300.1 0 0 U2 GTATTTTC..GCAG
GSVIVP00036552001 0 0 U2 GTTAAGGT..GCAG
estExt_Genewise1_v1.C_1300118 0 0 U2 GTATACAG..GTAG
fgenesh4_pg.C_LG_IX000590 0 0 U2 GTATAAAG..ACAG
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
QTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST----GEKRASENG
LTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFST----GEKRAVENG
QTGQSEGYGFVEFYTRAMAEKVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEAT
QTGQSEGYGFVEFYTRAMAEKVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEAT
QTGQSEGYGFVEFYSRATAEKVLQNFNGTMMPNTDQAFRLNWASFSA----GERRSEAAT
QTGQSEGYGFVEFYSRGTAEKVLQNYNGTMMPNTDQAFRLNWATFSA----GERRSSDAT
QTGQSEGYGFVEFYSRATAEKVLQNYNGTMMPNTDQAFRLNWATFSA----GERRSSDAT
QTGQSEGYGFVEFFSRATAEKILHSYNGTLMPNTEQPFRLNWATFST----GDRRT-DAG
QTGQLEGYGFVEFYSRAAAEKVLQSYSGSMMPNTEQPFRLNWASFA-----GERRA-DPG
QTGQLEGYGFVEFYSHAAAEKVLQSYSGSMMPNTDQPFRLNWASFA-----GERRA-DAG
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
PDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSR
PDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSR
SDLSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTR
SDLSVFVGDLAIDVTDAMLQETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTR
SDLSIFVGDLAIDVTDAMLQETFGSRFSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTR
SDLSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTR
SDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTR
SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR
SDLSIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTR
SDLSIFVGDLAADVTDAMLQETFATKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTR
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
AMTEMNGAFCSSRQMRVGIATPKRAAAY-GQQNGSQALTLAGGHG-GNGSM-----SDGE
ALTEMNGAYCSNRQMRVGIATPKRAIAN-QQQHSSQAVILAGGHG-SNGSMGYGSQSDGE
AMTEMNGVYCSSRPMRVGVATPKKTYGN-PQQYSSQAVVLAGGGGHSNGAMAQGSQSEGD
AMTEMNGVYCSSRPMRVGVATPKKTYGN-PQQYSSQAVVLAGGGGHSNGAMAQGSQSEGD
AMTEMNGVFCSNRPMRVGVATPKKTYGYQQQQYSSQAVVLAGGHP-SNGAVAQGSQSDGD
AMTEMNGVYCSSRPMRIGVATPKKTYGF-QQQYSSQAVVLAGGHS-ANGAVAQGSHSEGD
AMTEMNGVYCSSRPMRIGVATPKKTYGY-QQQYSSQAVLLAGGHA-ANGAVAQGSHSEGD
AMNEMNGIYCSSRPMRIGVATPKKASGY-QQQYSSQALVLAGGNA-SNGAVAQGSQANGD
AMMEMNGAFCSSRPMRIGVATPKKPSAY-QQQYSSQALVLAGGHA-SNGAMAQGSQSDGD
AITEMNGAYCSSRPMRIGVATPKKPSAY-QQQYSSQALVLAGGHA-SNGTMAQGSQSDGD
5: 335-335
chr4.CM0079.170.nc 1 1 U2 GTTTGTTA..CTAG
Glyma02g15190.1 1 1 U2 GTTTGTCA..CTAG
Glyma07g33300.1 1 1 U2 GTTTGTCA..CTAG
GSVIVP00036552001 1 1 U2 GTAATACC..TTAG
estExt_Genewise1_v1.C_1300118 1 1 U2 GTATGATA..TTAG
fgenesh4_pg.C_LG_IX000590 1 1 U2 GTATGAAA..TTAG
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
SNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLN
STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLN
SNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLN
SNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLN
SNNTTIFVGGLDSDISDEDLRQPFLQFGDVVSVKIPVGKGCGFVQFADRKNAEEAIHALN
INNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLN
LNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALN
STNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLN
SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLN
SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLN
6: 364-364
chr4.CM0079.170.nc 2 0 U2 GTGAGTCT..ACAG
Glyma02g15190.1 2 0 U2 GTGAGTCT..GTAG
Glyma07g33300.1 2 0 U2 GTGAGTCT..GTAG
GSVIVP00036552001 2 0 U2 GTGAGTTC..GTAG
estExt_Genewise1_v1.C_1300118 2 0 U2 GTGAGTTT..GCAG
fgenesh4_pg.C_LG_IX000590 2 0 U2 GTGAGTTT..GCAG
7: 407-407
chr4.CM0079.170.nc 3 2 U2 GTACACTT..ACAG
Glyma02g15190.1 3 2 U2 GTACTTTA..ACAG
Glyma07g33300.1 3 2 U2 GTACTTAA..ACAG
GSVIVP00036552001 3 2 U2 GTACACTT..ACAG
estExt_Genewise1_v1.C_1300118 3 2 U2 GTAACCTT..ACAG
fgenesh4_pg.C_LG_IX000590 3 2 U2 GTATCCTT..ACAG
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
GTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGY-SRGQ-GYNN--GYAN-QDSNMYATA
GTVIGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY-SRGH-GYNNGGGYANHHDSNNY---
GTVIGKQTVRLSWGRSPGNKHGRNDSNG--YGGHGYGGH-GY-GSNGYAARQNQDIAMQP
GTVIGKQTVRLSWGRSPGNKHWRNDSNG--YGGHGYGGH-GY-GSNGYAARQNQDIAMQP
GTVIGKQTVRLSWGRSPGNKHWRSDS----NGGH-YGGQ-GY-GGHGYGARQNQDMGMHP
GTVIGKQTVRLSWGRSPGNKHWRSDS----NGGH-YGGHQGY-GGHGFAVRQNQDIAMQP
GTVIGKQTVRLSWGRSPGNKHWRSDS----NGGY-FGGQ-SY-GGHGFAVRQNQDIAMQP
GTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAY-YGGQ-GYGGGYGYAMPQN-DPNMYA
GTTIGKQTVRLSWGRTPANKQWRGDHGNQWHGGY-FGGQ-GY-AGYGYAMPPNQDPGMYV
GTTIGKQTVRLSWGRTPANKQWRGDHGNQWHGAY-FGGQ-GY-AGYGYAMPPNQDPGMYV
8: 440-440
chr4.CM0079.170.nc 4 0 U2 GTGAGTTT..ACAG
Glyma02g15190.1 4 0 U2 GTGAGTTT..GCAG
Glyma07g33300.1 4 0 U2 GTGAGTTT..GCAG
GSVIVP00036552001 4 0 U2 GTAATTGC..GCAG
estExt_Genewise1_v1.C_1300118 4 0 U2 GTAAGGTT..ACAG
fgenesh4_pg.C_LG_IX000590 4 0 U2 GTAAATAG..ACAG
At~AT1G49600.1
At~AT3G19130.1
Mt~AC127168_20.2
Mt~AC151621_30.2
Lj~chr4.CM0079.170.nc
Gm~Glyma02g15190.1
Gm~Glyma07g33300.1
Vv~GSVIVP00036552001
Pt~estExt_Genewise1_v1.C_1300118
Pt~fgenesh4_pg.C_LG_IX000590
AAAVPGAS
----HGEN
AAAVQGAS
AAAVQGAS
TAAIQGAS
AAAIQGAS
ATAIQGAS
AAATYGAS
AAAASGVS
AAAASGAS


3' UTR introns