SRGD Gene ID 869 BLASTp at NCBI n/a n/a  
OrganismsGm ,At ,Os ,Pt ,Sb ,Zm ,Vv
Gene count10
Cintron count4
Cintron classesU2 ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
MKDRENDGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITF
-----MAGKEEGRIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTF
-----MEGKEEGRIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTF
-----MEGKEEGRIFVGGLSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTF
-----MEGKEEGRIFVGGLSWQTDERKLQDAFGRFGKVVDAQIMLERHTNRHRGFGFVTF
-----MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITF
-----MAAKEENRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITF
-----MAGKEENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITF
-----MAGKEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITY
-----MAGKEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITF
2: 41-41
AT1G60650.1 1 0 U2 GTCTTGTA..GTAG
LOC_Os03g47800.1 0 0 U2 GTACCCTA..GTAG
GRMZM2G083783_T01 0 0 U2 GTACCCGT..GTAG
gw1.1.3592.1 0 0 U2 GTACCCGC..GTAG
AT5G04280.1 1 0 U2 GTACCAAT..ATAG
Glyma10g42320.1 1 0 U2 GTACTCCT..GTAG
Glyma20g24730.1 1 0 U2 GTACCCCT..GTAG
GSVIVP00018120001 0 0 U2 GTAGGGTT..GTAG
estExt_Genewise1_v1.C_LG_X2845 0 0 U2 GTACGGTA..GCAG
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
TDRRGADDAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSR----GKGT---
SDPEAVDSAIKEMHCQELDGRTISVNKAEPKMNTDD---TRYESG---G----GRGEYRG
EDRRAVDSAIKEMRGQELDGRTISVNKAEPKMNTDD---TRFDSG---G----GRGEYRG
EDRRAVDSAIKEMHGQEIDGRTISVNKAEPKMNTDD---TRYAGG---G----GRGEYRG
EDRRAVDSAIKEMHGEELDGRTISVNKAEPKMNTDD---TRYESG---G----GRGEYRG
ADRRAMDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGG
ADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDAD-QGYRGGYSSG----GRGSY--
ADRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVD-QGYRGGYSSG----GRGSY--
ADRRGMEDAIREMHGRDFGDRIISVNKAQPKMG-EDPD-HGYNGGYSSG----GRGSY--
ADRRAMDDAIREMHGRDFGDRVISVNKAQPKIGGDDSD-HGYRGGYSTG----SRGGY--
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
----------EDECFKCRRPGHWARDCPSTGDDRERFRVPL-AMR-SRIGDIDGHRDRYG
GRGDGPP---PGNCFECGRAGHWARDCPNPGGGRS---ARYSSSK-FSAG---GRGDRFS
GRGDGPP---PGNCYECGRPGHWVRDCPSAAGGRS---GRF-PSK-FSGG---GRGDRFS
GRGDGPP---PGNCFECGRPGHWVRDCPSAAGGRS---GRF-PSK-FSGGSGVGRGDRFS
GRGDGPP---PGNCFECGRPGHWVRDCPSAAGGRS---GRF-SSK-FSGGGGGGRGDRFS
GGGGGGR-VGEDECFKCGRVGHWARDCPSAGGGRGGPVGGF-SSRASAYGGSDGRVDRYA
--GAGDR-VGQDDCFKCGRPGHWARDCPLAGGGRGRGGSSF-PSR-PRFGAAGGHGDRLG
--GAGDR-VGQDDCFKCGRPGHWARDCPLAGGGRGRGGSSF-PSR-PRFGAAGGNGDRLG
--GGGDRSAGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPF-PSR-SRFSG--GRGDRFG
--GGGDRPAGQDECFKCGRSGHWARDCPSA-GGRGGGGGLI-SSR-SRFGGAGDRGDRFG
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
DRDLEREREREREFDRYMDGRRDRDG-GRYSYRDRFDSGD-KYEPRDHYPFERYAPPGDR
GSDRF--G------DRYMDDR--YDG----GYREPVDVRDRYGGGRDRYANDRYPSGGDR
GSDRF--N------DRYMDDR--YDG-GRYGYRDQVDARDKYGGGRDRYANDRYPAGGDH
GSDRF--G------DRYMDDR--YDG-GRYGYRDQADARDRYAGGRDRYANDRYPSGGDH
GSDRF--G------DRYMDDR--Y------------------------------------
DRDRYVDR------ERYIDDR--YDGAARYGARDRFDSRE-AYIPRDRYASDRYAAPADR
GE-----R------DRYVDDR--YDG-GRYGDRDRFDNRDYKYGSRDRYAGDRYPTSGDR
GE-----R------DRYVDDR--YEG-GRYGDRDRFDNRDYKYGSRDRYASDRYPTSGDR
GE-----R------DRYMEDR--YDG-GRYGDRDRFESRDNKYGTRDRYVNDRYAPSGDR
GD-----R------DRYIDDR--YDG-GRYGDKDRFDSRDNKYGGRDRYASDRYPPNGDR
3: 231-231
AT1G60650.1 2 2 U2 GTTTGTAG..GTAG
AT5G04280.1 2 2 U2 GTTAGAAT..ACAG
Glyma10g42320.1 2 2 U2 GTATACAA..GTAG
Glyma20g24730.1 2 2 U2 GTATACAT..GTAG
GSVIVP00018120001 1 2 U2 GTACCCGT..GCAG
estExt_Genewise1_v1.C_LG_X2845 1 2 U2 GTACCTTA..GCAG
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
FV-SDRYG-MPEHHLENEYRGRER------------------------------------
YV-PDRYG-GPDRYQPSSY-GRERERSYERDGVRGNGGYDRSGPRGGGSYDRDGPRGGIS
FD-GDRYGGGLDRYAPNGY-GRERERSYERDGVRGGGGYDRSGSRGGGSYDRDGPRGGKG
FG-GDRYGGGPDCYVPSGY-GRERERSYERDGVRGGGGGGG-------------------
------------------------------------------------------------
FAGGDRYSRGSDRYPPGSY-DKAR------------------------------------
FA-SDRYGAGSD-YPQNGY-GKER------------------------------------
FA-SDRYGGGSD-YPQNGY-GKER------------------------------------
FS-GDRYG-GSDRYPQNGY-GKDR------------------------------------
FS-GDRYG-GSDRYAQNGY-GKDK------------------------------------
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
-SYDRDRYARDTS--DR---YGD---MGPIR---DEGRPYRSRPG-PYDRPSRPGG----
GGYDRD-GPRGGGV-DR---YGG---GGPAR---YDGGSYRDRSG-PYDRPSRGG-----
GGYVRD-GPRGGVA-DR---YGG---GGPAR---YDGGSYRERPG-PYDRPSRGG-----
-GYDRS-GPRGGGGYDRDGPRGG---GGSAR---YDGGNYRERPG-PYDRPSRGG-----
------------------------------------------------------------
-SFERDIAPSAGS--DR---YGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGGGGAY
-GYDRYSGPRGGA--DR---YGS---GMGGR---DEGRSYRGRPG-PYDRPSRGS-----
-GYDRYGGPRGGA--DR---YGS---GMGGR---DEGRSYRGRPG-PYDRPSRGS-----
-GYDRDAAPRGGG--DR---YAG---GGSAR---NEGRSYRNRPG-PYDRPNRGG-----
-GYDRDVGPRGGN--DR---YGS---GGPQR---NDRSSYRNRPA-PYDRPSRGG-----
At~AT1G60650.1
Os~LOC_Os03g47800.1
Zm~GRMZM2G161242_T01
Zm~GRMZM2G083783_T01
Sb~gw1.1.3592.1
At~AT5G04280.1
Gm~Glyma10g42320.1
Gm~Glyma20g24730.1
Vv~GSVIVP00018120001
Pt~estExt_Genewise1_v1.C_LG_X2845
-RPSSYERW-
---RFDDRFQ
--GRFDERH-
---RFDDRY-
----------
PSSSTFDRY-
--RSSLDRY-
--RPSLDRY-
-RPSSFDRY-
-HPSSFERY-


3' UTR introns