SRGD Gene ID 866 BLASTp at NCBI n/a n/a  
OrganismsAt ,Os ,Sb ,Vv ,Gm ,Zm ,Pp ,Lj ,Pt
Gene count10
Cintron count6
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os06g51420.1
Zm~GRMZM2G055682_T01
Sb~estExt_Genewise1.C_chr_108410
Lj~LjSGA_028354.1
Gm~Glyma10g31720.1
Gm~Glyma20g35890.1
Pp~gw1.290.18.1
At~AT3G05070.1
Vv~GSVIVP00013867001
Pt~estExt_fgenesh4_pg.C_LG_IV0304
 ---------MEDAAARRERLRALRAAKDLLSTPD--PAAAGQGQHHQNGNRETAPEQAEH
MG------AEEDAAARRERLRALRAAKDLLSTPDGAPTPSTDGE-HQNGNHEM----AEE
MG------AEEDAAARRERLRALRAAKELLSTPDGAPTPATDGE-QQNGNHEM----AEE
MG-SEEESIEQTVASRRERLAALRAAQELSNAPEAGT-----------------------
MG-SEEDSIEQSVASRRERLLALRAAQELSSVP---------------------------
MG-SEEDSIEQSVASRRERLLALRAAQELSSAA---------------------------
------------------------------------------------------------
MA-SEDESIEQKAAARKEALKALRAAQELSETK---------------------------
MG-EEEESIEQAAAVRRERLRALKAAQELLSAPE--------------------------
MGLEEEESIEQAAAARRERLKALKAAQELLNTPDA-------------------------
2: 45-45
LOC_Os06g51420.1 0 2 U2 GTAAACCA..TCAG
estExt_Genewise1.C_chr_108410 0 2 U2 GTATGACC..TCAG
Os~LOC_Os06g51420.1
Zm~GRMZM2G055682_T01
Sb~estExt_Genewise1.C_chr_108410
Lj~LjSGA_028354.1
Gm~Glyma10g31720.1
Gm~Glyma20g35890.1
Pp~gw1.290.18.1
At~AT3G05070.1
Vv~GSVIVP00013867001
Pt~estExt_fgenesh4_pg.C_LG_IV0304
 PTLPAPLDAPEEASKENINPTDESEEVQNDGDMPAMKFRNYLPHDEQLRGGKVAPVSLPK
PELPGHQDAPGEAAKEDGSPTEEAEEVEDDGELPAMKFRNYLPHDEQLRGGKLAPVSLPK
LALPGPQDASDEAAKEDGSPTEEAEEVEDDGELPAMKFRNYLPHDEQLRGGKLAPVSLPK
--------EPESAAANGNDDRDESPQEEQEN--LSMKFRNYVPHDKHLQEGKLAPAVLPK
--------EPEP-----NGNKDDDNEEDQEP--QEMKFRNYVPHDKNLQEGKLAPAVLPK
--------EPEP-----KDNNDDDNEEDQEP--QEMKFRNYVPHDKNLQEGKLAPAVLPK
-----------------------------------IKFRNYFPRDSDLQKAKHAPPVIPK
-------------------EDGEDEAVEEDG--PAMKFRNYVPQAKELQDGKLAPPELPK
--------DQDK-------PDDANPTMEEDN--PSMKFRNYLPHDKELQEGKLAPPVLPK
--------DSAK-----TADDDDDEAAEESN--PSMKFRNYVPQDKELQEGKLAPPVLPK
3: 88-89
LOC_Os06g51420.1 1 2 U2 GTGAGTTC..GCAG
estExt_Genewise1.C_chr_108410 1 2 U2 GTAAGGCA..GCAG
AT3G05070.1 1 2 U2 GTGAGTTT..ACAG
GSVIVP00013867001 0 2 U2 GTGAGCAT..GCAG
estExt_fgenesh4_pg.C_LG_IV0304 0 2 U2 GTGAGTAT..TCAG
4: 93-93
Glyma10g31720.1 0 2 U2 GTGAGTAT..GCAG
Glyma20g35890.1 0 2 U2 GTGAGTAT..GCAG
Os~LOC_Os06g51420.1
Zm~GRMZM2G055682_T01
Sb~estExt_Genewise1.C_chr_108410
Lj~LjSGA_028354.1
Gm~Glyma10g31720.1
Gm~Glyma20g35890.1
Pp~gw1.290.18.1
At~AT3G05070.1
Vv~GSVIVP00013867001
Pt~estExt_fgenesh4_pg.C_LG_IV0304
 FEDPI-SAETTEPKQVENPFGNIAPKNPNWDLKRDVQKRMDKLEKRTQKALAEIALEQQK
FEDPI-SAETAEPKEVENLFGNIAPKNPNWDLKRDVQKRIDKLERRTQKALAEIALEQQR
FEDPI-SAETAEPKEVENPFGNIAPKNPNWDLKRHVQKRIDKLERRTQKALAEIALEQQR
FEDPV-AASAPEPHPQEDPFLNIAPKKPNWDLRRDVQKKLDKLEKRTQKALYQLMGKFLL
FEDPVDDVPPPEPEAKEDPFLNIAPKKPNWDLRRDVQKKLDKLEKRTQKALYQLMVEQEK
FEDPVDAVPPPEPEAAEDPFLNIAPKKPNWDLRRDVQKKLDKLEKRTQKALYQLMVEQEK
FEDPV-ATDPLQVAGGEDPIVSIAPKKPNWDLRRDVAKKLEKLERRTHRAIVELMSK---
FEDPI-VALPPAVEKKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKAMHKLMEEQEK
FEDPV-AAAPPPSEEKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKAIFKLMEEQEK
FEDPV-AAAPPPSEKEEDPFLNIAPKKPNWDLRRDVQNKLDKLERRTQKAIYKLMEEQEK
5: 136-136
LOC_Os06g51420.1 2 0 U2 GTACTAGT..GCAG
estExt_Genewise1.C_chr_108410 2 0 U2 GTACAATT..GCAG
gw1.290.18.1 0 0 U2 GTATTTGC..ACAG
AT3G05070.1 2 0 U2 GTGTGTGT..GTAG
GSVIVP00013867001 1 0 U2 GTACTTGG..TCAG
estExt_fgenesh4_pg.C_LG_IV0304 1 0 U2 GTAATTGT..TTAG
6: 174-174
LOC_Os06g51420.1 3 1 U2 GTGAGTAT..GCAG
estExt_Genewise1.C_chr_108410 3 1 U2 GTGAGTGT..GCAG
Glyma10g31720.1 1 1 U2 GTATTTAC..ACAG
Glyma20g35890.1 1 1 U2 GTATTTAA..ACAG
AT3G05070.1 3 1 U2 GTAAGTGG..GCAG
GSVIVP00013867001 2 1 U2 GTGAGTAA..GCAG
estExt_fgenesh4_pg.C_LG_IV0304 2 1 U2 GTAAGTGA..GCAG
Os~LOC_Os06g51420.1
Zm~GRMZM2G055682_T01
Sb~estExt_Genewise1.C_chr_108410
Lj~LjSGA_028354.1
Gm~Glyma10g31720.1
Gm~Glyma20g35890.1
Pp~gw1.290.18.1
At~AT3G05070.1
Vv~GSVIVP00013867001
Pt~estExt_fgenesh4_pg.C_LG_IV0304
 EKEAL-GEGSDAAQD
EKEALEESQD-----
EKEALEESQD-----
SSSHLLDDLALMFR-
QNQLTEGDDTNGTVE
QNQLTEGDDTNGTAE
---------------
EREMAEADGNTIES-
ENQLAEDGGNVSED-
EKQLSENGGNGVVED