SRGD Gene ID 758 BLASTp at NCBI n/a n/a  
OrganismsVv ,At ,Os ,Gm ,Zm ,Pp ,Lj ,Sb ,Pt
Gene count11
Cintron count12
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASGQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDRDYGSKPGSGGAASDQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
MDRDYGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
2: 0-0
AT2G32600.1 0 0 U2 ..
3: 49-49
LOC_Os03g15700.1 0 2 U2 GTACTGCC..CCAG
estExt_fgenesh1_pg.C_chr_14131 0 2 U2 GTAACCCG..GTAG
GSVIVP00000599001 1 2 U2 GTACATCC..ACAG
grail3.0025001901 0 2 U2 GTATAGTA..GTAG
gw1.29.96.1 0 2 U2 GTAGGTTG..GCAG
fgenesh1_pg.scaffold_318000042 0 2 U2 GTAGGTTG..GCAG
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKFAPRKSVKIGRPGYQVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYKVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKLAPRKSVKIGRPGYKVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPLKRNVSVRRTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKLSLRKSVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPALPQPNKRKVNIRKTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKVNPRKTVKIGRPGYRVTKQ
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKVNPRKTVKIGRPGYRVTKQ
4: 106-106
LOC_Os03g15700.1 1 1 U2 GTGAGTAA..TCAG
estExt_fgenesh1_pg.C_chr_14131 1 1 U2 GTGCGTGA..GCAG
Glyma13g44430.1 0 1 U2 GTTTCATT..GCAG
Glyma15g00840.1 0 1 U2 GTTTCATT..GCAG
GSVIVP00000599001 2 1 U2 GTAAGGTT..TCAG
grail3.0025001901 1 1 U2 GTTTCTCC..GCAG
gw1.29.96.1 1 1 U2 GTGATTTT..TCAG
fgenesh1_pg.scaffold_318000042 1 1 U2 GTGATTAC..TCAG
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 YDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLLFAAEPYEIIGFK
YDPEMKQHSFLFEIGYPEIEDNCKPRHRFMSSYEQKVQSWDKGYQYLLFAAEPYEIIAFK
YDPETKQHSFLFEIGYPEIEDNCKPRHRFMSSYEQKVQSWDKRYQYLLFAAEPYEIIAFK
YDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYLLFAAEPYEIIAFK
FDHDTKQRSLLFQIEYPEIEELTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIISFK
YDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFK
YDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFK
FDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFK
FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQRIEANDKRFQYLLFSAEPYEIIAFK
FDQETRQRSLLFQIEYPEIEEGTEPRHRFMSSYEQRVQAWDKRYQYLLFASEPYEIIAFK
FDQETRQRSLLFQIEYPEIEEGTKPRHRFMSSYEQRVQAWDKRYQYLLFAAEPYEIIAFK
5: 132-132
LOC_Os03g15700.1 2 0 U2 GTCAGTGT..TTAG
estExt_fgenesh1_pg.C_chr_14131 2 0 U2 GTTAGTAT..TTAG
chr3.CM0590.350.nc 0 0 U2 GTAAGGAA..CTAG
Glyma13g44430.1 1 0 U2 GTTCTTTC..GTAG
Glyma15g00840.1 1 0 U2 GTTCTTTT..GTAG
GSVIVP00000599001 3 0 U2 GTGTGCTT..GCAG
gw1.29.96.1 2 0 U2 GTATGCTT..ACAG
fgenesh1_pg.scaffold_318000042 2 0 U2 GTATGCCC..ACAG
6: 154-154
LOC_Os03g15700.1 3 0 U2 GTAAAGCA..ACAG
estExt_fgenesh1_pg.C_chr_14131 3 0 U2 GTAAACCT..GCAG
chr3.CM0590.350.nc 1 0 U2 GTTTATGA..GCAG
Glyma13g44430.1 2 0 U2 GTGGGACT..ACAG
Glyma15g00840.1 2 0 U2 GTGGGACT..ACAG
GSVIVP00000599001 4 0 U2 GTAAGCAG..ACAG
grail3.0025001901 2 0 U2 GAAATTTC..GCAG
gw1.29.96.1 3 0 U2 GTAAGTTT..GTAG
fgenesh1_pg.scaffold_318000042 3 0 U2 GTAAATTC..GCAG
7: 179-179
LOC_Os03g15700.1 4 0 U2 GTGTGTGT..GCAG
estExt_fgenesh1_pg.C_chr_14131 4 0 U2 GTAATCTC..GCAG
chr3.CM0590.350.nc 2 0 U2 GTAAATCA..TCAG
Glyma13g44430.1 3 0 U2 GTATACTC..TCAG
Glyma15g00840.1 3 0 U2 GTATTTTC..TCAG
GSVIVP00000599001 5 0 U2 GTACTTTA..GCAG
grail3.0025001901 3 0 U2 GTATGCTG..TCAG
gw1.29.96.1 4 0 U2 GTCAATGA..GCAG
fgenesh1_pg.scaffold_318000042 4 0 U2 GTTATTGA..TCAG
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 IPSAEIDKSADKFFNYWDPDKKQYILQLYFKTRQPEANKP-PAAPGTLPNGSGGPPRP--
IPSTEIDKSANKFFSYWDPDKKEYLLQLYFKPRPPEANKPPPAPPGTLPNGTGVPGAP--
IPSTEIDKSASKFFSYWDPDKKEYLLQLYFKPRPPEAHKPPPAPPGTLPNGNGVPGAP--
VPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNKPQSAVGANG------------
VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASTDNGPTAPGVPPRPLP
VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANGTAPSGVPPRP--
VPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASTANGTAPSGVPPRP--
VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTAPGAPPRP--
VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKLKPPEANKPQSVAAANSTVPS--------
VPSFEIDKISNKFFTHWDPDTNMFTLQLYFKLRPTDQKGGPPLGVNGPPSG---------
VPSTEIDKVSNKFFTHWDPDTKMFT-----------------------------------
8: 204-204
LOC_Os03g15700.1 5 0 U2 GTGAGTAC..ACAG
estExt_fgenesh1_pg.C_chr_14131 5 0 U2 GTGAGTTT..ACAG
chr3.CM0590.350.nc 3 0 U2 GTTAGTAC..GCAG
Glyma13g44430.1 4 0 U2 GTTAGTAC..GCAG
Glyma15g00840.1 4 0 U2 GTTATTAC..GCAG
GSVIVP00000599001 6 0 U2 GTTTGTCT..ACAG
grail3.0025001901 4 0 U2 GTTAGTAT..ACAG
gw1.29.96.1 5 0 U2 GTAAGCTG..GCAG
fgenesh1_pg.scaffold_318000042 5 0 U2 GTAAGCAT..TTAG
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 --------PPPQVPPPPPQAPPPP-------PPNAPMGMPPRIPPPPVGGTQ-PPPPPPP
------TRPPAQAPPPLPQVPPPPPHA----PPPAPMGMPPRIPPPPMGGVQPPPPPPPP
------PRPPGQAPPPPPQVPPPPPHA----PPPAPMGMPPRIPPPPIGGVQ-PPPPPPP
--------------LPPP--PPPPPHQ-------------AQPPPPPPSGLF-PPPPPPM
PPPQGALPPPPQGALPPP--PPPPQGL----PPGAPMGNPPRAPPPPMPGSA-PPPPPM-
------LPPPPQGPLPPP--PPPPQGL----PPGAPMANPPRAPPPPMPGSM-PPPPPMT
------LPPPPQGPLPPP--PPPPQGL----PPGAPMANPPRAPPPPMPGSM--PPPPMA
------LPPPPQAP-PPP--PPPPQGL----PPGATIANPPRGPPPPMPGTL-PPPPPP-
--------------QPPP--PLPPQGL----PAG------SRPPPPPMPASL-PPPPPPA
--------------VTPPNRPPPPYHMGGQAPGGPPMWGPPQRGPPPMSG---PPH----
------------------------------------------------------------
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
 LANGPPRSIP--------PPPMTGGAMANFTPGA-----PPRPPMQGFPGPQQ-------
VANGPRPMIP--------PPP-------NFTPGA----PPPRPPMHGFPGQQQQ------
LANGPRPMIP--------PPP-------NFTPGA----PPPRPPMQGFPGQQQ-------
ANNGFRPMPPAG----------------------------------GFGHPNM-------
AANGPRPAPPGGMPSIPPPPPVSGASA-GFNMGA---RPPLMPPPQGY------------
AANGPRPPPSGGMPSIPPPPPVASGTS-GFNMGA---RPPSMPPPQGFPSQPMQGQGVRL
ATNGPRPAPSGGMPSIPPPPPVASGTS-GFNMGA---RPPSMPPPQGFPSQPMQGHGVRL
MGNGPRPMPPGGALPV-PPPPVGSGTMANFTPGTQMARPPSMMPPQGFPGQQMQGQGIRP
MANGPRPMPPGGAPPAPPPPPGGSGAMVNFTPGTQAGRPSSMLPPHGFLGQQMQGQTIRP
------------------------------------------------------------
----------------------------------------------NFSTLSMRC-----
Os~LOC_Os03g15700.1
Zm~GRMZM2G307906_T01
Sb~estExt_fgenesh1_pg.C_chr_14131
At~AT2G32600.1
Lj~chr3.CM0590.350.nc
Gm~Glyma13g44430.1
Gm~Glyma15g00840.1
Vv~GSVIVP00000599001
Pt~grail3.0025001901
Pp~gw1.29.96.1
Pp~fgenesh1_pg.scaffold_318000042
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PPPPPNMGQ------
PPPPPNMGQ------
PMQPPNMGQQVPRPQ
PLLPPNMGQ------
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