SRGD	Gene ID 755	BLASTp at NCBI	n/a	n/a		Organisms Os ,At ,Sb ,Gm ,Pp ,Vv ,Mt ,Zm ,Pt Gene count 11 Cintron count 10 Cintron classes U2 ,em ,im ,absent
Home (Search)						Bookmark for this page        Download data

		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	------------------------------------------------------------ ------------------------------------------MAAKREGEVDDLALVSKR --------------------------------------------MFP-PGNNSLALSAPR --------------------------------------------MFSAPGNNYLALVASR --------------------------------------------MFSAPGNNSLALVAPR ------------------------------------------MEIMSRENETALS--GPR ------------------------------------------MQVVPRESESALSVSGPR MPRIICSIEANISKPKYRDLMICKTLGFTTKTLTSISFSLYKMQGFPSEN--ALSVVGPR ------------------------------------------MQGFPGENEHALSVVGSK ------------------------------------------MQVFSIEGESALSVVGPR ------------------------------------------MQVFPSEGESALSVVGPR	2: 22-22 GSVIVP00034694001 0 2 U2 GTAGGGTG..AGAG 3: 41-41 GSVIVP00034694001 1 0 U2 GTACGCTC..CAAG
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	---------------------------GVKRTSSLDAPIMLLSGHGGAVYTMKFNPQGTA QRTDGGSLVPVRSPASQAGNQLSTTVEGIKRTSSLDAPIMLLTGHGGAVYTMKFNPQGTA PGMELAN-IQQHPNQALGPG-------GKQRTSSLEAPIMLLTGHQSAVYCMKFNPAGTV PGMELAN-FQQQPNQAPGPG-------GKQRTSSLEAPIMLLTGHQSAIYCMKFNPAGTV PGMELAN-VQH-PNQAPGPG-------GKQRTSSLEAPIMLLTGHQSAIYCMKFNPAGTV P-MEWST-VPHSASQGPGPN-------GKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTL P-MEWST-VPYTGSQGPGHN-------GKQRRSSLESPIMLLTGHQSAIYTMKFNPAGNV PGMELSA-VPCTGPRAPGAN-------GKQRTSSLESPIMLLAGHQSAIYTMKFNPTGTV P-MEWST-VPYNAPRAPGPN-------GKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSV P-MEWST-VPYNAPQAPGPN-------GKQRTSSLESPIMLLSGHQSAIYTMKFNPAGSV P-MEWST-VPYNAPQAPGPN-------GKQRTSSLESPIMLLSGHQSAIYTMKFNPAGSV	4: 86-86 estExt_gwp_gw1.C_1170033 1 0 U2 GTAATACT..TCAG 5: 105-105 estExt_gwp_gw1.C_1170033 2 0 U2 GTATGTTT..GCAG
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	IASGSHDKDIFLWNVQGDCDNYMVLKGHRNAVLDLVWTTDGQHIISASPDKTVRAWDAVT IASGSHDKDIFLWNVQGDCDNYMVLKGHRNAVLDLCWTSDGQHIISASPDKTVRAWDAVT IASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDGTQIISASPDKTVRVWDVET IASGSHDKDIFLWLAHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDKTLRVWDVET IASGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDKTVRVWDVET IASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET IASGSHDKEIFLWYMHGECKNFMVMRGHKNAVLDLHWTADGSQIISASPDKTVRAWDVET IASGSHEREIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAWDVET VASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTET IASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVET VASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVET	6: 129-129 estExt_gwp_gw1.C_1170033 3 1 U2 GTAAGTTT..GCAG
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	GKQVKKMAEHSSFVNSCCAARRGPPLIISGSDDGTAKLWDMRHRGCIQTFPDKYQVTAVA GKQIKKMAEHSLYVNSCSAARRGPPLIVSGSDDGTAKLWDMRHRGCIQTFPDKYQVTAVA GKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDKYQITAVS GKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDKYQITAVS GKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDKYQITAVS GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS GKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSKLWDLRQKGAIQTFPDKYQITAVS GKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVS GKQIKKMVEHLSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVS GKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVG GKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVG	7: 182-182 estExt_gwp_gw1.C_1170033 4 0 U2 GTGTGTTT..GCAG 8: 234-234 estExt_gwp_gw1.C_1170033 5 0 U2 GTTGGTTT..GCAG
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	FSEGADKIFSGGIDNDIKVWDLRKNEVAMKLQGHTETITSMQLSPDGSYLLTNSMDCTLR FSDGADKIFSGGIDNDIKVWDLRKNEVAMKLQGHTETITSMQLSPDGSYLLTNSMDCTLR FSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELK FSEAADKVFTGGLDNDVKWWDLRKNEVTEHLKGHQDMITGMQLSPDGSYLLTNAMDNELK FSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELK FSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLC FSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLC FSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLC FSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLC FSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLLTNGMDCKLC FSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLLTNGMDCKLC
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	VWDMRPYAPQNRCVKIFTGHQHNFEKNLLRCNWSPDGQKVTSGSADRMVYIWDTTSRRIL IWDMRPYAPQNRCVKIFTGHQHNFEKNLLRCNWSPDGQKVTSGSADRMVYVWDTTSRRIL IWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWDTTSRRIL IWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWDTTSRRIL IWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWDTTSRRIL VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTI IWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYIWDTTSRRIL IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRIL IWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL IWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL IWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRIL	9: 309-309 estExt_gwp_gw1.C_1170033 6 0 U2 GTTGGTTG..GCAG
Pp~e_gw1.72.72.1 Pp~estExt_gwp_gw1.C_1170033 Os~LOC_Os06g44370.1 Zm~GRMZM2G089857_T01 Sb~estExt_Genewise1.C_chr_107259 At~AT2G43770.1 Pt~eugene3.00190894 Vv~GSVIVP00034694001 Mt~AC126009_25.2 Gm~Glyma16g04160.1 Gm~Glyma19g29230.1	YKLPGHSGCVNEAVLHPREPIIGSCGSDKQIYIGEIDPTVR YKLPGHSGSVNEAVFHPKEPIIGSCGSDKQIYLGEIDPTVR YKLPGHNGSVNETAFHPTEPVIGSCGSDKQIYLGEL----- YKLPGHNGSVNETAFHPTEPIIGSCGSDKQIFLGEL----- YKLPGHNGSVNETAFHPTEPIIGSCGSDKQIYLGEL----- YKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI----- YKLPGHAGSVNECVFHPTEPIIGSCSSDKQIYLGEI----- YKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI----- YKLPGHNGSVNECVFHPNEPIVGSCSSDKQIYLGEI----- YKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI----- YKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI-----	10: 361-361 estExt_gwp_gw1.C_1170033 7 0 U2 GTATGCAC..GCAG