SRGD Gene ID 753 BLASTp at NCBI n/a n/a  
OrganismsSb ,Zm ,Os ,Gm ,Pt ,At ,Vv ,Pp ,Lj
Gene count11
Cintron count17
Cintron classesU2 ,im ,absent ,GC ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~chr1.CM0206.120.nd
Pp~estExt_gwp_gw1.C_2010100
At~AT3G05760.1
Os~LOC_Os03g61640.1
Zm~GRMZM2G051458_T01
Sb~estExt_Genewise1.C_chr_30714
Vv~GSVIVP00022628001
Gm~Glyma03g39120.1
Gm~Glyma19g41680.1
Gm~Glyma03g39120.2
Pt~estExt_Genewise1_v1.C_LG_XIII0652
-MSNSNNVSA--------EFNPQILVN------------------------------FSF
-----MAAAG-VDNTSRRKWDKEEFAKRAREREEEEEEEEAGRHRGKPRGPPVQRKPLKN
-MASSNTTTG-VDNTFRKKFDVEEFKERAREREKKESD----RSKSRSKGPPVQRAPLKH
---MSSNPVG-VDNTFRRKFDKEEYLERARQREREEKE---EARKGKEKGPPVQRQPLKH
---MSGNPVG-VDNTSRRKFDKEEYLERARQREQREKD---EARKGKERGPPVQRQPLKH
---MSGTPVG-VDNTSRRKFDKEEYLERARQREQREKD---EARKGKERGPPVQRQPLKH
---MCSQAVG-VDNTFRRKFDKEEYLERARKREQEACF--AKFSSPFSKGPPVQRKPLKH
MSNTSNNVAG-VDNTFRRKFDREEYLERARERERQEEE---GRAKPKGKGPPVQRKPLKH
MSNTSNNVAG-VDNTFRRKFDREEYLERARERERQEEE---GRAKPKAKGPPVQRKPLKH
-MISLNQVAG-VDNTFRRKFDREEYLERARERERQEEE---GRAKPKGKGPPVQRKPLKH
--MANNNAGGSVDNTFRRKFDPEEYLERAREREKQEAE---GRGKSKSKGPPVQRKPLKH
2: 6-6
AT3G05760.1 0 0 U2 GTAAGCAT..GTAG
LOC_Os03g61640.1 1 0 U2 GTAAGTTA..ATAG
GRMZM2G051458_T01 1 0 U2 GTGAGTCC..GCAG
estExt_Genewise1.C_chr_30714 1 0 U2 GTGAGTCG..GCAG
Glyma03g39120.1 0 0 U2 GTAAGTGC..TCAG
Glyma19g41680.1 0 0 U2 GTAAGTTC..TCAG
estExt_Genewise1_v1.C_LG_XIII0652 0 0 U2 GTAAGTCA..ATAG
3: 34-36
AT3G05760.1 1 0 U2 GTTTCACT..GCAG
LOC_Os03g61640.1 2 0 U2 GTCCTCAT..GCAG
GRMZM2G051458_T01 2 0 U2 GTAATAGT..CCAG
estExt_Genewise1.C_chr_30714 2 0 U2 GTTGTAAT..CCAG
Glyma03g39120.1 1 0 U2 GTGCCTTG..ATAG
Glyma19g41680.1 1 0 U2 GTGCGTTG..ACAG
Glyma03g39120.2 0 0 U2 GTGCCTTG..ATAG
estExt_Genewise1_v1.C_LG_XIII0652 1 0 U2 GTGGGTTT..TTAG
4: 46-46
AT3G05760.1 2 1 U2 GTAGGGTT..GCAG
LOC_Os03g61640.1 3 1 U2 GTATGTAG..ACAG
GRMZM2G051458_T01 3 1 U2 GTACGTGG..GCAG
estExt_Genewise1.C_chr_30714 3 1 U2 GTATGTGG..GCAG
GSVIVP00022628001 0 1 U2 GTTTGTTT..GCAG
Glyma03g39120.1 2 1 U2 GTAAAAGT..GCAG
Glyma19g41680.1 2 1 U2 GTAAATCA..GCAG
Glyma03g39120.2 1 1 U2 GTAAAAGT..GCAG
estExt_Genewise1_v1.C_LG_XIII0652 2 1 U2 GTAAGTGA..GCAG
Lj~chr1.CM0206.120.nd
Pp~estExt_gwp_gw1.C_2010100
At~AT3G05760.1
Os~LOC_Os03g61640.1
Zm~GRMZM2G051458_T01
Sb~estExt_Genewise1.C_chr_30714
Vv~GSVIVP00022628001
Gm~Glyma03g39120.1
Gm~Glyma19g41680.1
Gm~Glyma03g39120.2
Pt~estExt_Genewise1_v1.C_LG_XIII0652
PHHLVLL--------LITNLNRLNQAAG--------------------------------
RDYEVDLTSRLGKTQVVTPVAPLSQQAGYFCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYHVDLESRLGKTQVVTPVAPLSQQAGYFCRVCDCVVKDSANYLDHINGKKHQRALGMS
RDYEVDLESRLGKTQVVTPIAPLSQQAGYYCKVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLDSRLGKTQVVTPIAPLNQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLDSRLGKTQVVTPIAPLNQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
RDYEVDLDSRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMS
5: 74-74
AT3G05760.1 3 0 U2 GTATCATT..CCAG
LOC_Os03g61640.1 4 0 U2 GTTTGCTA..CCAG
GRMZM2G051458_T01 4 0 U2 GTTTGTAA..CCAG
estExt_Genewise1.C_chr_30714 4 0 U2 gtttgtaa..CCAG
GSVIVP00022628001 1 0 U2 GTTAGCCA..GCAG
Glyma03g39120.1 3 0 U2 GTATGCCA..GTAG
Glyma19g41680.1 3 0 U2 GTATGCCA..GCAG
Glyma03g39120.2 2 0 U2 GTATGCCA..GTAG
estExt_Genewise1_v1.C_LG_XIII0652 3 0 U2 GTGTAGTT..GCAG
6: 85-85
AT3G05760.1 4 0 U2 GTAATGGC..ACAG
LOC_Os03g61640.1 5 0 U2 GTTCGTCC..ACAG
GRMZM2G051458_T01 5 0 U2 GTTTGTGC..ACAG
estExt_Genewise1.C_chr_30714 5 0 U2 GTTTGTGC..ACAG
GSVIVP00022628001 2 0 U2 GTATCTTT..GCAG
Glyma03g39120.1 4 0 U2 GTACCTGT..GCAG
Glyma19g41680.1 4 0 U2 GTACCTGT..GCAG
Glyma03g39120.2 3 0 U2 GTACCTGT..GCAG
estExt_Genewise1_v1.C_LG_XIII0652 4 0 U2 GTATCATT..GCAG
7: 111-111
AT3G05760.1 5 1 U2 GTACGTGG..ACAG
LOC_Os03g61640.1 6 1 U2 GTAAGTAT..ACAG
GRMZM2G051458_T01 6 1 U2 GTAAGTGG..TCAG
estExt_Genewise1.C_chr_30714 6 1 U2 GTAAGTGG..ACAG
GSVIVP00022628001 3 1 U2 GTATGTGG..TTAG
Glyma03g39120.1 5 1 U2 GTATGTAG..TTAG
Glyma19g41680.1 5 1 U2 GTATGTCT..TTAG
Glyma03g39120.2 4 1 U2 GTATGTAG..TTAG
estExt_Genewise1_v1.C_LG_XIII0652 5 1 U2 GTATGTTA..TCAG
Lj~chr1.CM0206.120.nd
Pp~estExt_gwp_gw1.C_2010100
At~AT3G05760.1
Os~LOC_Os03g61640.1
Zm~GRMZM2G051458_T01
Sb~estExt_Genewise1.C_chr_30714
Vv~GSVIVP00022628001
Gm~Glyma03g39120.1
Gm~Glyma19g41680.1
Gm~Glyma03g39120.2
Pt~estExt_Genewise1_v1.C_LG_XIII0652
-------------------------------VDNTFRRKFDREEYLERAR----------
MRVERASLQQVQERFESLKRKKTVGGFTEEDFDNRIQKQREEEEELKKSKREKKKEKKRG
MRVERSSLEQVQERFEVLKKRKAPGTFTEQDLDERIRKQQEEEEELKRQRREKKKEKKKG
MRVERASLEQVQKRFESLKKRKDPGSFSEQDLDERILKQQQEDEERKRQRKEKKKEKKKE
MRVERASLEQVQKRFEALKKRKDPSAFTEEDLDERIMKQQQDEEERKRQRKEKKKEKKRE
MRVERASLEQVQKRFEALKKRKDPSAFTEQDLDERIMKQLQEEEERKRQRKEKKKEKKRE
MRVERASLQQVQERFEVLKKRRTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKE
MRVERASLEQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEK
MRVERASLQQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEK
MRVERASLEQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEK
MRVERASLQQVQERFEKLKKRREPGSFTEQDLDERILKQQEEEEERKRQRRERKKEKKEE
8: 129-129
AT3G05760.1 6 0 U2 GTAAAATA..TTAG
LOC_Os03g61640.1 7 0 U2 GTATAATA..GCAG
GRMZM2G051458_T01 7 0 U2 GTATTACA..GCAG
estExt_Genewise1.C_chr_30714 7 0 U2 GTAGTACA..GCAG
GSVIVP00022628001 4 0 U2 GTGAGCTT..ACAG
Glyma03g39120.1 6 0 U2 GTGCAACT..ACAG
Glyma19g41680.1 6 0 U2 GTGCAACT..ACAG
Glyma03g39120.2 5 0 U2 GTGCAACT..ACAG
estExt_Genewise1_v1.C_LG_XIII0652 6 0 U2 GTACTGGC..GTAG
9: 149-149
AT3G05760.1 7 1 U2 GTAAGACT..ACAG
LOC_Os03g61640.1 8 1 U2 GTGAGAAA..TCAG
GRMZM2G051458_T01 8 1 U2 GTGAGAAA..ACAG
estExt_Genewise1.C_chr_30714 8 1 U2 GTGAGAAA..ACAG
GSVIVP00022628001 5 1 U2 GTAAGAGA..CTAG
Glyma03g39120.1 7 1 U2 GTAAAGCC..ACAG
Glyma19g41680.1 7 1 U2 GTAAAGCC..ACAG
Glyma03g39120.2 6 1 U2 GTAAAGCC..ACAG
estExt_Genewise1_v1.C_LG_XIII0652 7 1 U2 GTAAGACT..TCAG
10: 176-177
AT3G05760.1 8 0 GC GCAAGTCT..TCAG
LOC_Os03g61640.1 9 0 U2 GTAATTGC..TCAG
GRMZM2G051458_T01 9 0 U2 GTAAGCGC..TCAG
estExt_Genewise1.C_chr_30714 9 0 U2 GTAAGTGC..TCAG
GSVIVP00022628001 6 0 U2 GTCAGTAT..TCAG
Glyma03g39120.1 8 0 U2 GTAAGTGT..TCAG
Glyma19g41680.1 8 0 U2 GTAGTGTC..TCAG
Glyma03g39120.2 7 0 U2 GTAAGTGT..TCAG
estExt_Genewise1_v1.C_LG_XIII0652 8 0 U2 GTTAGTGT..AGCA
Lj~chr1.CM0206.120.nd
Pp~estExt_gwp_gw1.C_2010100
At~AT3G05760.1
Os~LOC_Os03g61640.1
Zm~GRMZM2G051458_T01
Sb~estExt_Genewise1.C_chr_30714
Vv~GSVIVP00022628001
Gm~Glyma03g39120.1
Gm~Glyma19g41680.1
Gm~Glyma03g39120.2
Pt~estExt_Genewise1_v1.C_LG_XIII0652
------------------------------
KEERDESTDVVDPDMAAMMGFGGFSSS-KK
KVVEEEP--EMDPEVAEMMGFGGFGSSKKS
LAAQNEPEEDIDPDVAAMMGFGGFRSS-KK
QATQHEP-EDVDPDIAAMMGFGGFGSS-KK
QAAQHEP-EDVDPDIAAMMGFGGFGSS-KK
KAVEEEP--ELDPDVAAMMGFGGFRSS-KK
AV--EEP--EIDPDVAAMMGFGGFRSSNKK
AV--EEP--EIDPDVAAMMGFGGFRSSNKK
AV--EEP--EIDPDVAAMMGFGGFRSSNKK
----EEA--DIDPDIAAMMGFGGFGS--KK