SRGD	Gene ID 749	BLASTp at NCBI	n/a	n/a		Organisms At ,Pt ,Pp ,Lj ,Vv ,Sb ,Os ,Gm ,Zm Gene count 11 Cintron count 9 Cintron classes U2 ,em ,im ,absent
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	MAAMGQEDDDVDHYEVLCLPSGEEGAGLSLEQIEKAYRTQSRLRHPDKRPDDPNATADFQ MAATGQEGDDVDHYEVLCLPSGEEGAALTIEHIEKAYRTQSRLRHPDKRPDDPNATADFQ MAALVQEADDVDHYEVLCLPSGEEGAALTVEQIEKAYRTQSRLRHPDKRPDDPNATADFQ -------------------------------DIRKAYRKRALELHPDKRGDDPGAAVEFQ --------MDVDHYNVLGLPSGEEGAKLTEKEIAKAYKLKALVLHPDKRPDDPNAHENFQ ------MEGFVDHYIVLGLASGEEALKLTEKEIAKAYKLKALDLHPDKRPDDPDAHEKFQ ------MDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQ ------MDAEIDHYAVLGLPSGEEGANLTEKEITKAYRWKALELHPDKKRDDPNAAANFQ ------MEAEMDHYAVLGLPSGEEGAKLTEKEINKAYRWKALELHPDKRPDDPNAAANFQ ------MEAEMDHYAVLGLPSGEEGAKLTEKEINKAYRWKALELHPDKRPDDPNAAANFQ ------MEAEIDHYAVLGLPSGEEGAKLTDKEINKAYRWKALELHPDKRPDDANAAANFQ	2: 6-6 AT5G23590.1 0 0 U2 .. 3: 54-54 gw1.8.103.1 0 1 U2 GTGGGTGA..TCAG
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	RLASSYNFLRDESLRRQFDARLRGRREAAARAAASGVKRRKAVSDLEERERAASTGQAVD LLSSSYKLLRDESLRRQFDARLRGRREAAARAAATGVKRRKAVSDLEERERAAAAGHPAD RLSSSYKLLRDESLRRQFDARLRGRREAAARAAAAGVKRRKAVSDLEERERAAAAGIPAD KLQKAYEILNDERARASYDELLRVRKERVDKESKQSEKRQKMMRTLAEKEKAY------D KLKLSYEVLKDEKARKLFDDLLRAKREQRARRGQQDAKRRRMVSDLEERERAAFA---VD RLKTSYEVLKDEKARKLFDDLLRIQREKQHKKSQVDSKRRKMMSDLEERERSAFS---PN KLKTSYEILKDEKARKLFDDLLRVKREQFHRQAQYDVKRRRMVSDLEERERAANA---PD QLRTSYDILKDEKARKLFDDLLRVKRDHQRRQSQRDGKRRKMMDDLDRREREAST---AD QLRTSYDILRDDKARKLFDDLLRVKRERELRNLQRDGKRRKMVSDLERRERDANA---PD QLRTSYDILRDDKARKLFDDLLRVKRERELRNLQRDGKRRKMVSDLERRERDANA---PD QLRTSYDILRDDKARKLFDDLLRVKRDRELRNSQRDGKRRKMVSDLERRERDANA---PD
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	AAEAARREDKRKAADVKRELEEFFAAKQSAS----SSTPPA-------SAPGAPQDAPKT PEELAKREAQRMAADIERELAAFRAAKQASA-FGATSTSAH-----GDKKGGTPQDGVKT PEELAKREAKRMAADIERELAAFRAAKQASA-SGAASTSAH-----GDRKGGTPQDAVKT REQKVKLEEDYVQKQLKEQIASINKAHGRKS--PSFAAPEI-----PISNSNSEA----T PAEVEKRRVEKIDKELRAQVDKIKAMFANKG------VPVV-----KKETVGVKESRIEE PSARAYDEEERIARKLKEEIDRIRARHAKKK--SGFQTPESNVDEKRKEERSGAGASVQL PASKAREEEERITKKLKEEIARIRAMHANKGASGSRKEAPG-----TRKESVADGGG-GL PSVKEREEEARIARQLKEEIARIRAMHNKNA---VPDLATM-----KKESAGGGGGGVAV PAAKEREEEARIARQLKEEIARIRAMHGKKE--EAPAAAPA-----KEKDSGGSSG---V PAAKEREEEARIARQLKEEIARIRAMHGKKE--EAPAAAPA-----KEKDSGGSSG---V PAAKEREEEARIARQLKEEIARIRAMHGKKE--EAAVKPAA-----KKKESGGGGGGGGV	4: 150-150 gw1.8.103.1 1 0 U2 GTAGCACG..AGAG 5: 158-158 GRMZM2G176499_T01 0 0 U2 GTAAGGGT..TCAG estExt_Genewise1Plus.C_chr_111861 0 0 U2 GTAAGTGT..TCAG 6: 168-168 LOC_Os03g04400.1 0 0 U2 GTAAGGAT..CTAG
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	DKGKILKVSW---EGGADY-YNAAKLEEIFKQFGGVEDVVIKTRKS-RSRGSAIVVMASK DKGKILKVSW---DGSADS-YSAAKLEEIFQKFGKVEDIVIKTRKS-RSKGSAIVVMGSK DKAKILKVSW---DGSADS-YNAAKLEELFQKFGKVEDVVIKTRKS-RSKGSAIVVMGSK EAERTLKVSWTCLEGGAGD-YSAAQLEKIFQEFGEIQDLVVRARKS-LKKRSALVVMATK DEKKILNVRW---EKVDSEGYSAERLRELFSKFGEVKDVVIRSNKEKKKRGQALVEMATE DKERMLKVSW---EKSGEG-YTAGRLREVFSEFGEVEDVVIRST---KKKCSALIVMATK NKEKVLKVSW---EKGGED-YTAEGLREVFAKFGEVEDVVLKSS---RKKGSALVVMASK DQEKVLKVSW---EKVGED-YPAEKLRELFSKFGEVEDVVIKGS---KKRGSAL------ DQEKVLKVSW---EKVGED-YSADKLRELFSKFGEVEDVVIKGS---KKKGSALVVMAIK DQEKVLKVSW---EKVGED-YSADKLRELFSKFGEVEDVVIKGS---KKKGSALVVMAIK DQEKVLKVSW---EKVGED-YAADKLRELFSKFGAVEDVVIKGS---KKKGSALVVMATK
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	EAALSALQNHSVYNVFSVPLIVAPVQESGGVPTR--STHTPETRPSNLGGTGFNDLEASV EAALLAIQN--HFSLF--PLNVAPVQESGGLSTR--PTETYESRTNNTDGTGFNDLEASV EAALLAIQN--HFSLF--PLNVAPVQESGGLPAR--SAQTYESTASNIDGTGFSDLEASV QAAVLATES--VCGEYSNPLLVLPL----------------------------------- EAAVAALGN--VYGNLSNPLLVLPYGKKVAATTI---PTRESDGLNIFSGINHQAYEDNI DGAVAATRT--LCGNLSNPLLVVPLQKAAQTDFLTAKKSAEAEPQSNIVGAGLQAYEDAV EAAVAATGN--VCGHISNPLLVLPLEPAVVMEFP--PRSMEPEPSSNLVGAGYQSFEESV ------------------------------------------------------------ EGAVAATGS--VIGHLANPLLVVPLKPASVADSSSVPKSAETTRMSNLVGAGYQAFEDSV EGAVAATGS--VIGHLANPLLVVPLKPASVADSSSVPKSAETTRMSNLVGAGYQAFEDSV EGAVSATGS--VIGHLANPLLVLPLKPATVADSSSVPKSAETTRMSNLVGAGYQAFEDSV	7: 242-242 LOC_Os03g04400.1 1 0 U2 GTAAGTCC..ACAG GRMZM2G176499_T01 1 0 U2 GTAAGTCC..ACAG estExt_Genewise1Plus.C_chr_111861 1 0 U2 GTAAGTCC..ACAG gw1.8.103.1 2 0 U2 GTAAGTGA..TCAG eugene3.00090311 1 0 U2 GTAAGTTT..GTAG GSVIVP00038614001 0 0 U2 GTGAGTAT..ACAG Glyma20g24050.1 0 0 U2 GTAAGTTT..CCAG Glyma20g24050.2 0 0 U2 GTAAGTTT..CCAG Glyma10g42950.1 0 0 U2 GTAAGTTT..CCAG
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	FRKLQEAQKRKQSG---------------------------------------------- FRKLREAQKRKHFG---------------------------------------------- FRKLQEAQKRKQCG---------------------------------------------- ------------------------------------------------------------ LEKLQKVS---------------------------------------------------- MQRLLQAAMDQKKRGV-------------------------------------------- LKKLQKMALRTNRLNIFNQERVVIVIRSLNSSCCNFSTESQICTLRIDITDGSHRFRDET ------------------------------------------------------------ LKKLQKAAEKQR------------------------------------------------ LKKLQKAAEKQR------------------------------------------------ LKKLQKAAEKQR------------------------------------------------	8: 305-305 LOC_Os03g04400.1 2 0 U2 GTAATTTT..GCAG GRMZM2G176499_T01 2 0 U2 GTAAATAG..GCAG estExt_Genewise1Plus.C_chr_111861 2 0 U2 GTAATTAG..GCAG GSVIVP00038614001 1 0 U2 GTTTGAAT..GAAG Glyma20g24050.1 1 0 U2 GTTTGTCG..GCAG Glyma20g24050.2 1 0 U2 GTTTGTCG..GCAG Glyma10g42950.1 1 0 U2 GTTTGTCG..GCAG
Os~LOC_Os03g04400.1 Zm~GRMZM2G176499_T01 Sb~estExt_Genewise1Plus.C_chr_111861 Pp~gw1.8.103.1 Pt~eugene3.00090311 At~AT5G23590.1 Vv~GSVIVP00038614001 Lj~chr5.LjT39E05.240.nd Gm~Glyma20g24050.1 Gm~Glyma20g24050.2 Gm~Glyma10g42950.1	---- ---- ---- ---- ---- ---- FQAI ---- ---- ---- ----
		3' UTR introns