SRGD Gene ID 747 BLASTp at NCBI n/a n/a  
OrganismsAt ,Sb ,Pp ,Lj ,Vv ,Pt ,Os ,Gm ,Zm
Gene count11
Cintron count14
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
------------------------------------------------------------
MDLLSAAYGATSDDDDDGAEATPTPGWAA-----TGYASAAGPPPKRPRWEPPPYLPPPP
MDLLSAAYGATSDDEDAADRPFSMP--VA-----TRSASFSPPPMKPPRWESHPYLPPTH
MDLLSAAYGATSDDEDAADRPFSMP--VA-----TRSASFSPPPMKPPRWESHPYLPPTH
MDLLSAAYGATSDDEDAADPPSSVP--VA-----TGSASFAPPPLKRPRWESHQYLPPTH
MDLICNSYANDSDDEPEPVTNERLTSKIAAAPSIPSKRPYPVPEERQYKPPRRPYPPHGS
------------------------------------------------------------
MDLLCHAYSNSSDEEPEPEPESESKPEYG-----PEFRPFIPPPPKRFKPET--------
MDLLCDAYSNASDEEREEQPKRHKP---------SSNSSSNPPKPHLFIPN---------
---------------------------------------MPQVSIERMKKTRH-------
------------------------------------------------------------
2: 0-0
AT5G54520.1 0 0 U2 ..
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
---------MNSSLLSLAGVPGRYVSKRERAAIAATAL-APNPTSPVRPPLE-------L
PYPIPQPARPRAAPPPASTASGRYVSKRERALMAASSS-PVDSSSPLPPSAAAQFGSPVV
CF--PQPPLPDAALPLASPSSGRYISKRERALLASSGA-HIESGSSL-PLTRVDFES-AV
CF--PQPPLPDAALPLASPSSGRYISKRERALLASSGA-HIESGSSL-PLTRVDFES-AV
CF--PQQPLLNTVTPLASPSSGRYVSKRERALLASSQV-HVESGSPLSPVTRAEVYC-AV
YSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLASLST-IPTPDQSSDLSQKPYSSPTVL
-----------------------------------------------------------M
---------PSQNFRTEAPVPGRYISKRERALSAQSPR-VPNPATNP-------------
---------PHYPQTPQPPIPGTYVSKRQRASMGNLAASLPNPDPAPSSFIR-------T
-------NLSNIICPLECLWVQLIKSSKCIKIIISSKT-----------TTLTFFLFINL
-----------FKVYFSIKALHFYIYLRQLR-----------------------------
3: 76-76
Glyma12g17530.1 0 0 U2 GTAAACAT..ATAG
4: 86-86
Glyma20g27820.1 0 0 U2 GTGAGGAA..ATAG
5: 95-95
Glyma12g17530.1 1 1 U2 GTGAGATC..ATAG
6: 110-110
e_gw1.39.102.1 0 1 U2 GTTCTCTC..CCAG
7: 117-118
LOC_Os02g21490.1 0 1 U2 GTGAGGAT..CCAG
GRMZM2G090168_T01 0 1 U2 GTGAGCTT..ACAG
Sb08g003460 2 1 U2 GTGAGCTT..ACAG
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
ASVLNAKLPHRIQRKLDHSLGNAGGCNRCPRELVTKLEGHSKAVIAVRWSPTHGALLASA
GSISDSNLRADIFHSLRCQTKPGST-RRMPLKLSVSLTGHTKAVNCVDWSQSHAHLLASA
GSITYPNLRADILHSLRCQPKPGPS-TSFPLRLSVCLKGHTKAINCVDWSPTHGHLLASA
GSITYPNLRADILHSLRCQPKPGPS-TSFPLRLSVCLKGHTKAINCVDWSPTHGHLLASA
GSINNTNLRADILHSLQCQPKPGPS-TSFPLKLSVCLKGHTKAINCVDWSPSHGHLLASA
GSISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASA
GSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSHKKSVNTIQWSPTHAHLLASA
--------------NLNPNPPGRASLSQIPKRLAVDLRSHTKAVNALDWSPSHAHLLASA
GSILDVDTPHSILSLLKSKSKGHQNLNPRSEKLSATLYGHTKAVSAIHWSSTHAHLLASA
GSILDADIHHNILSLLKSKAKGHQSPNLISEKLSASLYGHTKAVNAIHWSSTHAHLLASA
---------------LPFSSKGHQSPNLISEKLSATLYGHTKAVNAIHWSSSHAHLLASA
8: 138-140
estExt_Genewise1_v1.C_LG_XIII2644 0 0 U2 GTCGTGGC..AAAG
Glyma20g27820.1 1 1 U2 GTTTATAA..AAAG
9: 172-172
e_gw1.39.102.1 1 1 U2 GTGTGTAA..GCAG
LOC_Os02g21490.1 1 1 U2 GTCAGTAT..ACAG
GRMZM2G090168_T01 1 1 U2 GTTAGTAA..GCAG
Sb08g003460 3 1 U2 GTTAGTAA..GCAG
GSVIVP00027473001 0 1 U2 GTTAGTGC..ACAG
estExt_Genewise1_v1.C_LG_XIII2644 1 1 U2 GTATCAAT..ACAG
Glyma12g17530.1 2 1 U2 GTAAGTTC..ACAG
Glyma20g27820.1 2 1 U2 GTAAGTTC..ACAG
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
GMDHKAYVWNVWESPAHQMGRCLSCHTHALKDIQWSLDGNSVLSCGFDQTARLSDVETGA
GMDHTIHVFNVW-NKGNTTARVFKFHTAAVKDVRWSLNGLSLLSGGFDCSLRLVDVEEGK
GMDHTVHVWNVW-DKGNTTARVLKHHTAAVKDVRWSLHRPFLLSGGLDCSLQLVDVVEGK
GMDHTVHVWNVW-DKGNTTARVLKHHTAAVKDVRWSLHRPFLLSGGLDCSLQLVDVVEGK
GMDHKVHVWNVW-DKGNTTARVLKHHTAAVKDVRWSLHRPFLLSGGLDCSLQLVDVVEGK
GLDGAVYVWNVW-SNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGV
GMDHAICIWNAW-SRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGL
GMDQTVCVWNVW-SRDQKIARLFRYHNAAVKDVKWSPQGLSVLSCGYDCSSRLIDVEKGI
AMDHLVCIWNVW-SRDQKKACVLNFHNAAVKDVKWSQQGLFLLSCGYDCTSRLVDVEKGI
GMDHAVCIWNVW-GRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGL
GMDHAVCIWNVW-SRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGL
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
QTQQVFSESQVVNVVRFHPLEGNLFITGGSKGSVKLWDVRLGKFACEYSKALGDVMDVDF
EI-KVFKEDQAVEVIKFNPSNSNLFLSGGSKGSLRLWDIRSGLVTKEYQRNLGTILDIEF
VM-EVFKEDQAVEVIKFNPSNPDLFLSGGSKGSLKLWDIRCGLVTKEFQRSLGTILDIDF
VM-EVFKEDQAVEVIKFNPSNPDLFLSGGSKGSLKLWDIRCGLVTKEFQRSLGTILDIDF
VM-KVFKDDQAVEVIKFNPSNPDLFLSGGSKGSLRLWDIRCGLVTKEFQRSLGTILDIDF
ET-QSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEF
QT-QIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEF
ET-QIFKEDQVVGVIKFCPDNSNIFLSGGSKGCLRLWDIRNGNVVREYIRGLGPILDVEF
ET-QVFREDQIIGVIKFHPDNSSLFLSGGSKGHIKLWDIRTGKVVHNYDRNLGPILDVEF
ET-RVFREDQIVGVINTDTPSP---------CRVRVSDTCP-----------CPILDVEF
ET-QVFREDQIVGVIKFHPDNSNLFLSGGSKGQVKLWDARTGKIVHNYNRNLGPILDVEF
10: 242-242
e_gw1.39.102.1 2 0 U2 GTTAGTTT..GGAG
11: 254-254
Glyma12g17530.1 3 2 U2 GTTCCATC..GAAG
12: 280-280
Glyma12g17530.1 4 1 U2 GTCCGTGT..TTAG
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
SPDGSRFVTTSDIAKRNSSDKSLLVWNFATQIPLSNQVYLEAYTCPSARFHPFEQCFIAQ
SSDGKQFICSTDTSRSNVSENSIIIWDTLRQVPLSNQVYTEAYTCPCVRYHPFEASFVAQ
SADGRQFISSTDTTRSNISENTIIVWDVLRQVPLSNQVYTEAFTCPCVRYHPREASFVAQ
SADGRQFISSTDTTRSNISENTIIVWDVLRQVPLSNQVYTEAFTCPCVRYHPREASFVAQ
SADGRQFISSTDTTRSNISENTIVVWDVSRQVPLSNQVYTEAFTCPCVRYHPREASFVAQ
IAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQ
TVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQ
TINGKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQVYVEAYTCPSVRCHPFEPCFVAQ
TTNGKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQV------------SKFSTIF---
TMNGKQFISSSDVSQSNANKNAIIVWDVSREIPLSNQVYVEAYTCPCVRCHPFDSIFVAQ
TMNGKQFISSSDVSQSNASENAIIVWDVSREIPLSNQVYVEAYTCPCVRRHPFDSTFVAQ
13: 336-336
e_gw1.39.102.1 3 0 U2 GTGAGTTT..GCAG
LOC_Os02g21490.1 2 0 U2 GTAATAGG..GCAG
GRMZM2G090168_T01 2 0 U2 GTATTTGG..ACAG
Sb08g003460 4 0 U2 GTAATAGG..ACAG
GSVIVP00027473001 1 0 U2 GTAAGACT..TCAG
estExt_Genewise1_v1.C_LG_XIII2644 2 0 U2 GTAAGAGA..TCAG
Glyma12g17530.1 5 0 U2 GTGAGATA..TCAG
Glyma20g27820.1 3 0 U2 GTGAGATA..TCAG
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
SNADYIAVFSGRAPFKVNKHKRFQGHQVAGYRIQCSFSSDGECVVTGSADGHVYFYNYRS
SNGNYIAIFSAKSPFKLNKYMRYEGHGVWGFPIKCNFSFSGKELTSGSSDGCIYFYDYKS
SNGNYIAIFSARPPFKLNKYTRFEGHGVWGFPVKCSFSLGGRELASGSSDGSIYFYDYRS
SNGNYIAIFSARPPFKLNKYTRFEGHGVWGFPVKCSFSLGGRELASGSSDGSIYFYDYRS
SNGNYIAIFSARPPFKLNKYMRFEGHGVWGFPVKCNFSLSGRELASGSSDGCIYFYDYKS
SHGNYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKS
SNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKLASGSSDGCIYLYDYRS
SNANYIAIFSSSPPFRLDKYKRYESHGVSGFPVKCNFSLDGEKLVSGSSDGCIYIYNYRS
----YILI--------------------------CRY-----------------------
SNGNYDAIFTTTPPYRLNKYKRYEGHVVSGFPIKCNFSLDGKKLASGSSDGSIYLYDYQS
SNGNYVAIFTTNPPYRLNKCKRYEGHVVSGFPVKCNFSLDGKKLASGSSDGSIYLYDYQS
Pp~e_gw1.39.102.1
Os~LOC_Os02g21490.1
Zm~GRMZM2G090168_T01
Zm~GRMZM2G136014_T01
Sb~Sb08g003460
At~AT5G54520.1
Vv~GSVIVP00027473001
Pt~estExt_Genewise1_v1.C_LG_XIII2644
Lj~LjSGA_021138.1
Gm~Glyma12g17530.1
Gm~Glyma20g27820.1
TQLIKKIAAHQGVCSDAVYHPSLPSVVATCGWDGIVSVFE
SRLLSKIQAFKEPCTDVAYHPVIPNVIASCSWAGEIAVFE
ARLLRKIEAFKEACTDVAYHPVMPNVIAACSWAGEISVFE
ARLLRKIEAFKEACTDVAYHPVMPNVIAACSWAGEISVFE
ARLLRKIEAFKEACTDVVYHPVMPNVIASCSWSGEISVFE
TALIKKLKAYEQPCVNVSYHPVLPNVVAACSWNGQVSVFE
SELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE
SELIRKIKVYEQACIDVVFHPVLPNVIGSCSWNGDVSIFE
--------------------------------------HE
SKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSILVFE
SKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSILVFE