SRGD	Gene ID 69	BLASTp at NCBI	n/a	n/a		Organisms Os ,Gm ,At ,Pp ,Sb ,Vv ,Mt ,Zm ,Lj ,Pt Gene count 32 Cintron count 47 Cintron classes U2 ,em ,im ,absent
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	-MATAE-AASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKP-APSGP ----MV-GAAVAAAPRFAPEDPTLPAPWRALVDGNTGYIYYWNPETNITQYDKPLPLAAS ----MV-GAAVSAAPRYAPADPTLPPPWTALVDGNTGYIYYWNPDTNITQYDRPLPLVGS MAATE--AATDSSGPRYAPDDPTLPAPWKGLIDGST--LYYWNPDTNETQYERP---VAA MAAQEA-AAADSLGPRFAPDDPTLPAPWKGLIDGAT--LYYWNPETNVTQYEKP-AATAG MAAQEATAAADSSGPRFAPDDPTLPAPWKALIDGAT--LYYWNPETNVTQYEKPAAATAG MAAQEA-AAADSLGPRFAPDDPTLPAPWKGLIDGAT--LYYWNPETNVTQYEKP-AATAG MASAAA-AAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRP---TAP MASAAA-AAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRP---TAP MASAAA-AAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRP---TAP -MTSSA-SAPASNGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPN -MESSA-SAPASKGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPS ----MA-ATAAASVVRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKP------ -------MAATASAIRYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERP------ ----MS-AGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQ ----------------------MLLEPF---------LLHLAHASQHI------------ -MSGGT-GSSGRAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQ -MSGGT-GSSGRAAPRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQ -MSGAS-GSTGRAAPRYAPDDLTLLKPWRGLVDGTTGYLYYWNPETNVTQYERPMPPENQ ------------------------------------------------------------ -------MAATATGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQPERP------ ----MAATATAAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP------ ----MAATATAAVGPRYAPADPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERP------ ---MAATATASSMGPRYAPADPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP-----S ---MAATATVSLMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP-----S --MAAT-ATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP------ ----AA-ATTSSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERP-----S -MATTE-DTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSAPPPH -MATAE-PAPSSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKP---TAL ---------------RYAPEDPTLPKPWTGLIDGSTGLLYYWNPETNITQYEKP------ -MATAE-AASTGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKP-TPPVP -MATAE-AASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKP---TPP	2: 1-1 AT3G06480.1 0 0 U2 .. 3: 4-4 AT3G01540.1 0 0 U2 .. AC144760_39.2 0 0 U2 .. 4: 48-48 GSVIVP00020710001 0 2 U2 GTATGAGA..AGAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	APVPSTPSLAPIPG------------------------------------AHSMTAGGMA GPPLPSGPP-----------------------------------------PSSASINSNL GRPLPSGPP-----------------------------------------PSSVISGTKL VPPLPTGPPPVTTTPMPTSASGAFSQPSMQSNQGGQVSQSQQERPGQTVYPQASHLGHQQ VPPLSAGLPPATPAQVPESAPVAFPQLNVQFGQAGQAGH-Q-ERPDQAAYPQAGQLGQQH VPPMPAGPPPPTPAQGPEPAPGVYSQPNI--GQAGQAGH-QYPQAGQAAYPQAGQLGQQH VPPLSAGLPPATPAQVPESAPVAFPQLNVQFGQAGQAGH-Q-ERPDQAAYPQAGQLGQQH PPSSPPAQQPPER-------------------------------------PRNSDPAESQ PPSSPPAQQPPER-------------------------------------PRNSDPAESQ PPSSPPAQQPPER-------------------------------------PRNSDPAESQ SPPQPPGYSRPEER------------------------------------PRSSTPSERS SPSQPPGYSRHDEK------------------------------------PRSSAPSEQR TPSLPPKFSPAVSV------------------------------------SSSVQVQQTD -ASSAPPKLAAIPV------------------------------------SSSVQTNQQS LPPPPPLPPPPPR-------------------------------------SGRGDRDRDR ------------------------------------------------------------ LLPPPPPLPPPP--------------------------------------PRSRDRRDRS LLPPPPPLPPPP--------------------------------------PRSRDRRDRS LPPPPPPLPPPP--------------------------------------PRSRDRRDRS ------------------------------------------------------------ GASSNAIFS-----------------------------------------IHNVVTMVEN SSSAAPLKTSSVP-------------------------------------SSSVQVQQSS SSSAAPLKTSSVP-------------------------------------SSSVQVQQSS SSSTAQPKSSSVP-------------------------------------NSSVQVQQSS SSSASQSKFSSVP-------------------------------------SSSVQVQQSS ---TLPKSVSSLPI------------------------------------TSSVQVHQSS TSAIPPKSSSSVPI------------------------------------TPSVQVEQSS SATTPKLAQIPVPS------------------------------------SGQGHQAQHE PPPLPPGPPPAAAT------------------------------------PKLAPIPAAR -PSVPPQMPPALP-------------------------------------PNASTPNVPF APVASAPSLAPIPA------------------------------------AHTMQPGGMM VPSGPAPSLAPIPG------------------------------------AHTVQPGGKV	5: 65-65 GSVIVP00020710001 1 1 U2 GTTTAGCA..AAAG 6: 111-112 estExt_fgenesh1_pm.C_1380026 1 0 U2 GTAATATC..GCAG GSVIVP00020710001 2 2 U2 GTTCTTCA..ACAG 7: 116-117 LOC_Os01g07740.3 1 0 U2 GTAGCCCA..TCAG LOC_Os01g07740.1 1 0 U2 GTAGCCCA..TCAG LOC_Os01g07740.2 1 0 U2 GTAGCCCA..TCAG Sb03g004420 1 0 U2 GTAACAAC..TCAG GSVIVP00020710001 3 0 U2 GTCTGAAT..AAAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	QQQH-------------------------------------------------------- SLPA-------------------------------------------------------- AAIP-------------------------------------------------------- LQQPTQQSPFQP--------TAQHQAPFQHSQRAPYQQQQQQMSQQPPAHQYPSTHPQHM TQQPAQQQPFQQQQPFQQHVQAQHQASFQH---VPYQQQQTHMPNQP--HQYHSTHPQHM TQQPA-----------QQHVPAQHQASFQQ---VPYQQQQAYMPNQP--HQYHSAHPQHM TQQPAQQQPFQQQQPFQQHVQAQHQASFQH---VPYQQQQTHMPNQP--HQYHSTHPQHM AQAG-------------------------------------------------------- AQAG-------------------------------------------------------- AQAG-------------------------------------------------------- SETT-------------------------------------------------------- SEAA-------------------------------------------------------- AYAP-------------------------------------------------------- SSGF-------------------------------------------------------- RDRS-------------------------------------------------------- ------------------------------------------------------------ RSRS-------------------------------------------------------- RSRS-------------------------------------------------------- RSRS-------------------------------------------------------- ------------------------------------------------------------ IFIL-------------------------------------------------------- QGRG-------------------------------------------------------- QGRG-------------------------------------------------------- QGSQ-------------------------------------------------------- QGSQ-------------------------------------------------------- HRGY-------------------------------------------------------- SHRG-------------------------------------------------------- QAKP-------------------------------------------------------- TMQT-------------------------------------------------------- QNVG-------------------------------------------------------- QQHG-------------------------------------------------------- QQHGQQMQQVQS------------------------------------------------
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ PYQHGHYMQPQQQQFQQGPQYSYQVGQQQQMPQAAYNQGQQQPISQAAYN--QSQQPAQA PYQHGLYMQPQQQ--QQAPPYSYQADQQPQMRQTAYNQAQQPSVPQAAYNQSQSQQPPMP PYQHGPYMQPQQQ--QQAPPYSYQADQQPQMPQTAYNQAQQSPMPQAAYNQGQSQQPPMP PYQHGLYMQPQQQ--QQAPPYSYQADQQPQMRQTAYNQAQQPSVPQAAYNQSQSQQPPMP ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------VGHVSQQHGFQQQPQQFPSQHVRPQMMQQH ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------SQQQMGHLTQQHGQSMPPQQQSPHMAQVTQQQSSHGAQAAQQQNQ
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ VGAYNQG--QQPPVSQASYNQS--QQPTQAAGAYNQGQQPSMPQASYNQVQPPQMAHATY QSSYDQGQSQQPPMPQPSYNQGQVQQPPMPQPSYNQGQQSMIPQSAYNQAQQPQIPHGAY QAAYNQGQVQQPPMPQPSYNQGQVQQPPMPQPSYNQGQQSMIPQSAYNQPQQPQMPHGAY QSSYDQGQSQQPPMPQPSYNQGQVQQPPMPQPSYNQGQQSMIPQSAYNQAQQPQIPHGAY -----------------------------------------------ASRTQNAAPADDR -----------------------------------------------ASRTQNAAPADDR -----------------------------------------------ASRTQNAAPADDR -----------------------------------------------VSRPQYAPLSDNR -----------------------------------------------VSRQQYVPPSDNR -----------------------------------------------------PKDDDKY ---------------------------------------------------NSGKEDDKY -----------------------------------------------RSRTPPRRDHRDR ------------------------------------------------------------ -------------------------------------------------RTPPRRDHRDR -------------------------------------------------RTPPRRDHRDR -------------------------------------------------RTPPRRDRRDR ------------------------------------------------------------ -------------------------------------------------LIPLFLILQQS ---------------------------------------------------RSPDFSDRY ---------------------------------------------------RSPDFSDRY -------------------------------------------------CGHSPDFSDRY -------------------------------------------------RGRSPDFSDRY --------------------------------------------------NPSVKEDDRY -----------------------------------------------------YSPDDRY PAQQMPQQSGQQFPQQQSQSMVPHPHGHPSVQTYQPTTQQQQQGMQNQHSQMPQQLSHQY -----------------------------------------------NGATNTTATWAAN -----------------------------------------------------PGHGGGF -----------------------QQMLQAAQQQNHHGQQMMQQPQGHQARQPMMQPQGQQ HGQKMMQQPQGQQMMQQPQGQQMMQQPQGQQMMQQPQGQQMMQPQGHQARQQMMQPQGQQ	8: 267-267 Glyma09g03560.1 0 0 U2 GTACAATC..CCAG 9: 287-287 GSVIVP00019684001 0 1 U2 GTAGTCTA..GCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ NQGQQPPGMRIPQGQVQ-PQQSPGFHQPAQVSQVLQGSQSQGLQMPPQQGQLQHGFHLTT NQSQQPLGDRIPQGQGQHPQQSLSSHHPAQASQSPQVSQPQGPKMPTQQGQLQHGLPFTQ NQGQQPQGVRIPQSQGQHPQQSLSFHHPAQATQSPQVSQPQGLKMPSQQGQLQHGLPFTQ NQSQQPLGDRIPQGQGQHPQQSLSSHHPAQASQSPQVSQPQGPKMPTQQGQLQHGLPFTQ AR---------------------------------------------------------- AR---------------------------------------------------------- AR---------------------------------------------------------- AR---------------------------------------------------------- AR---------------------------------------------------------- SR---------------------------------------------------------- GRGSDGP----------------------------------------------------- DR---------------------------------------------------------- ------------------------------------------------------------ DR---------------------------------------------------------- DR---------------------------------------------------------- DR---------------------------------------------------------- ------------------------------------------------------------ AR---------------------------------------------------------- DR---------------------------------------------------------- DR---------------------------------------------------------- DR---------------------------------------------------------- DR---------------------------------------------------------- GR---------------------------------------------------------- GR---------------------------------------------------------- AHSQQHYMGFRPHMQTQGLQNSHQTPQGGPHGQQFPSQQEYNSLAPKREGDEFHGGKKTG SA---------------------------------------------------------- NA---------------------------------------------------------- MHHQMPPQAIHSQHFGQGMPQDQGSHIVQPQAHQFTSQNMHYMSYQQNVITSRQPNSQHI MHRQMPPQAIHSQHFVQGMPQDHGSHIVQPQTHQFTPQNMHYMSYQQNAITSRQPNSQHS
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ PQGKQPHHGHVGPQLSQVPLGQQSSTLKVDETGVTGGLDGKQTGFSLPLSQQRGQGPVSK -HGKTP-----------LSHGQQSPLLKDDDGGVH---EGKRTGFPLPLSQQRGQAPLPN -HGKPP-----------LSHGQQSPLLKDDD-GVY---EGKRTGFSLPLSQQRGQAPLPN -HGKTP-----------LSHGQQSPLLKDDDGGVH---EGKRTGFPLPLSQQRGQAPLPN ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ FSQPHLPNSERSPSQNTHFEANAASQKTNANLAMAQKCNGPQANAAVTQFQQPGANLIHQ ------------------------------------------------------------ ------------------------------------------------------------ QPNMVSPGQPNSQQVQHNMHGQPFENQQTTYPKVEVAEFKNGSQVGHSLSHYPQRSALPV QPNMVSPGQPNSQQVQHNMHGQPFENQQTTYPKVEEVDSKNGSQVGHSPSQYPQRSALPV
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	--------------------------------------------------------GQQM --------------------------------------------------------GGTV ----------------------------------------------------------SG QQLPSNHQLSGS-HNQPNIPGAGGPSYPAKHHLGGSSPGEANNMNFLSSPAQMHQGGMDT QQLPSTHQHPGALSSQPNIPGVGGPFYPARNLPDGPSSAETNNMGFMNSPAQMHQGGADT QQLPSSHQNPGALSSQPNIPGVGGPLYPAKHLPGGSSSAETNNMGFMNSPAHMHQGGADT QQLPSTHQHPGALSSQPNIPGVGGPFYPARNLPDGPSSAETNNMGFMNSPAQMHQGGADT --------------------------------------------------------NDHL --------------------------------------------------------NDHL --------------------------------------------------------NDHL --------------------------------------------------------NDH- --------------------------------------------------------NDH- --------------------------------------------------------GSER --------------------------------------------------------KSDS ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------------------GGTV --------------------------------------------------------NGNG --------------------------------------------------------NGNG --------------------------------------------------------NGSG --------------------------------------------------------NGTG --------------------------------------------------------ANNA --------------------------------------------------------AHNA QLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVRGAQPLHP --------------------------------------------------------ASRA --------------------------------------------------------DGHP QNNQNNPAEVGSG------------QQFRALSGSMQQSPSGSDLYYQH--------GPNF QNNQNIPAEVGSGQVPNVGVNAGQPQQFRALSNSMQQSPSGSDLYYQH--------GPNF	10: 445-445 Glyma09g03560.1 1 0 U2 GTGCCTAA..ACAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	MQQQQQG----------------------------------------------------- TGSAGPVGMGLSGGQ--------------------------------------------- KDQPNGVSGSAPPVGMGLSGGQ-------------------------------------- NYRQHPASSPVVPNHIGPSPVRPPMGFKMGSSEDHFERNELYSSGRMDGTNNLQQQPKLA NYQKKPVSGHTVPNHVGPSPIRPPMGFDMGNSVGHFERDDPHSYGRFDGAKALQQQPKLA NYQQKPVSGHAVPNHAGPSPIRPPMGFDMGNSDGHFERDDSHSYGRFDGTKALQQQPKLA NYQKKPVSGHTVPNHVGPSPIRPPMGFDMGNSVGHFERDDPHSYGRFDGAKALQQQPKLA NDHFERRTEAAGSHAQNVPFTEQNT----------------------------------- NDHFERRTEAAGSHAQNVPFTEQNT----------------------------------- NDHFERRTEAAGSHAQNVPFTEQNT----------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ VSRFSEGGRSGPPYS--------------------------------------------- GSRFNEAGRTGPISS--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ HS---------------------------------------------------------- GSNEGGSRNHQSSKGDSFSSH--------------------------------------- GSNEGGSRNHQSSKGDSFSSH--------------------------------------- GSNEAGSRNNQKSSKGGSYAS--------------------------------------- GSNDAGSRNNQSSKGGSYTS---------------------------------------- GSKPDAVT---------------------------------------------------- ESKADAV----------------------------------------------------- AAMPKDIRISGGPPTNADPAMGQTGH---------------------------------- ANAITVTAANAPTAK--------------------------------------------- NHNM-------------------------------------------------------- HSQMSPGMMHGHPSNVHPAGQKMGHEDNLHGRAGNEYDYNSTKDMSTMGCQQPDITPIPI HSQMSPGMMHGHPSNVLPSGQKMGPEDSLRVRAGNEYYYNSNKDMATMGRQQPDITPIPI	11: 484-485 estExt_gwp_gw1.C_420049 1 1 U2 GTTCGAGG..TCAG LOC_Os01g07740.3 2 0 U2 GTGCGCTT..TCAG LOC_Os01g07740.1 2 0 U2 GTGCGCTT..TCAG LOC_Os01g07740.2 2 0 U2 GTGCGCTT..TCAG AT5G14610.1 1 0 U2 GTACTAAC..ACAG 12: 490-490 Glyma05g08750.1 1 0 U2 GTACTTAT..TTAG Glyma19g00260.1 1 0 U2 GTATTTAT..TTAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	-----------------------------------SYLPQQHGQSMPQQQQQNSLGAQVT -----------------------------------KHGAGVYDNTDRDGYYKRPRVEAYT -----------------------------------KHGAGVYDDADRDGYYKRPRVEAYA ALPPLNRPQDMRNGPPYPQPDNLGAFNMGPPHSVPNLHNHGPFP-EASMRPPSRMFAPPN ALPTSQNSMVMHNGPLYPRPDNFGGHNMAPPHSVPNPYNLGPLPIGTSVRPPSSMFAPPD PIPTSQNPMGMHNGPPYPRPDNFGGYNMAPPHSVPNPHNLGPLPIGTSVRPPSSMFAPPD ALPTSQNSMVMHNGPLYPRPDNFGGHNMAPPHSVPNPYNLGPLPIGTSVRPPSSMFAPPD -----------------------------------RSNPSSQPCSAAGVYPAQNVFSEAA -----------------------------------RSNPSSQPCSAAGVYPAQNVFSEAA -----------------------------------RSNPSSQPCSAAGVYPAQNVFSEAA -----------------------------------SEPHYASGVNLSQSAPSTNQVSQAA -----------------------------------SEPRSASGVNLSQSAPSTNQVSQAA -----------------------------------NGAANGVGDSAYGAASTRVPLPSSA -----------------------------------NDAASGLGNASSGGSSARGP-PSSA -----------------------------------DRDRRHDDHRSAPSHHHPLPAAAAI ------------------------------------------------------------ -----------------------------------DRDRRHDEHASSKTASSHHHPAPVA -----------------------------------DRDRRHDEHASSKTASSHHHPAPVA ----------------------------------------DDEHASSKTASSHHHPAPIA ------------------------------------------------------------ -----------------------------------HDPPNGIVGAGHGGSSVRGQ-GSSG -----------------------------------NNVANGTPAAGNGSSIKSQV--PLE -----------------------------------NNVANGTPAAGNGSSIKSQV--PLE -----------------------------------HDVSNGTHVAGNVDSSVRGH-GASD -----------------------------------HDVSNGTNVAGNGNSSVRGH-GASD -----------------------------------RTIQSENVPNGTANGLSARVYGSSA -----------------------------------TRSTNGISARGHG---------SSS -----------------------------------GTYGHAGPAFPNKSLVRPHFVTSPD -----------------------------------SAIASATWATNTTAAWAANTTTSRL -----------------------------------YSHATSGPPFPNNALMRPSFIETAD PRNQQDMRIGNAPFQNVMPSGNGSGIAGNAVPSMFVPPIGGPSPLSTNPSMRPPYMGSSD PRNQQDMRIGNTPFQNVMPSGNGSGIAGNAVPSMFVPPIGGPSPLSTNPLMRPPYMGSSD	13: 544-544 Glyma09g03560.1 2 0 U2 GTACTTTT..GCAG Glyma15g14470.1 0 0 U2 GTACTTTT..GCAG 14: 547-548 LOC_Os11g46240.1 0 0 U2 GTAATAAT..ACAG e_gw1.5.15871.1 0 0 U2 GTAATAAT..GCAG 15: 575-576 Sb03g004420 2 0 U2 GTGACCTG..TCAG gw1.I.2506.1 0 1 U2 GTATTAGC..GCAG 16: 581-581 LOC_Os01g07740.3 3 0 U2 GTGACACG..CCAG LOC_Os01g07740.1 3 0 U2 GTGACACG..CCAG LOC_Os01g07740.2 3 0 U2 GTGACACG..CCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	QPQQPSQIAQSAQQQNSQLGQSVPQP-------GFHQARPQMMQP--------------- NALTSDIDSYRKLHEVTALGDNVPAPFMSFEAVGF---PPDMLRE--------------- NVPTSDIDSYRKLHEVSALGENVPAPFLSFEAVGL---PPDMLRE--------------- FPSIASADAYRQHHEVTAVGENVPPPFMTFEATGF---PPEILQE--------------- FPSVSSADAYRQHHEVTAMGENVPAPFMTFEATGF---PPEILRE--------------- FPSVSSADAYRQHHEVTAMGENVPAPFMTFEATGF---PPEILRE--------------- FPSVSSADAYRQHHEVTAMGENVPAPFMTFEATGF---PPEILRE--------------- SGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGF---PPEILRE--------------- SGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGF---PPEILRE-------VSAHNLHD SGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGF---PPEILRE-------VSAHNLHD SGNQMSTEAYRAKHEITIIGNESPAPFMTFQSTCF---PSDILRE--------------- NGSQMSTEAYRAKHEITIVGNEAPAPFMTFQSTGF---PSEILRE--------------- PASELSPEAYSRRHEITVSGGQVPPPLMSFEATGF---PPELLRE--------------- AGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGL---PNELLRECPNFMPYALSFVPGA AADDPSTEAYRHRHEITVVGDNVPAPITSFETGGF---PPEILKE--------------- -----------------------------LDALSF------------------------- VADDPSTEAYRRRHEITVTGDNVPTPITSFEAGGF---PSEILKE--------------- VADDPSTEAYRRRHEITVTGDNVPTPITSFEAGGF---PSEILKE--------------- VADYPSTEAYRRRHEITVTGDNVPAPITSFEAGGF---PSEILKE--------------- ------------------------------------------------------------ PGSGASTESYRRRHEITVTGDDVPQPFTSFESTGF---PPEIIRE--------------- TGPALSPDAYRRRHEITVTGDNVPPPVTSFASSGF---PSEILRE--------------- TGPALSPDAYRRRHEITVTGDNVPPPVTSFASSGF---PSEILRE--------------- AGAGLSPESYRHRHEISVTGDNVPPPLASFGSTGF---PSELLREWQLGGYPSAIFAPGE AGAGLSAESYRHRHEISVTGDNVPPPLASFGSTGF---PSELLRE--------------- GGSGMSGEAYRRRHEITVTGDEVPPPLTSFETTGF---PSEILKE--------------- GGSGLTGEAYRRRHEITVTGDEVPPPLTSFEATGF---PSEILKE--------------- VPHLSPVEIYRKQHEVTTTGENIPAPYITFESSGL---PPEILRE--------------- TNGTTTIEVYCQQHEVTATGENVPPPLMTFEATGF---PPEILRE--------------- ISNLSPAEVYRQEHEVSATGDNVPAPFMTFEATGF---PSEILRD--------------- ATDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGF---PPEILRE--------------- ATDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGF---PPEILRE---------------	17: 605-605 GSVIVP00019684001 1 1 U2 GTGCATCA..CCAG 18: 618-618 estExt_fgenesh1_pm.C_1380026 2 0 U2 GTAAGTCT..GCAG estExt_gwp_gw1.C_420049 2 0 U2 GTTAGTTC..GCAG LOC_Os11g46240.1 1 0 U2 GTAATCAC..TCAG e_gw1.5.15871.1 1 0 U2 GTAAGGAG..CCAG LOC_Os01g07740.3 4 0 U2 GTATGTGT..CTAG LOC_Os01g07740.1 4 0 U2 GTATGTGT..CTAG LOC_Os01g07740.2 4 0 U2 GTATGTGT..CTAG Sb03g004420 3 0 U2 GTATGTGA..ACAG AT5G14610.1 2 0 U2 GTAAGTAT..GTAG LOC_Os01g36860.1 0 0 U2 GTAAGGAT..GCAG GRMZM2G078826_T01 0 0 U2 GTATGAAT..GCAG GRMZM2G078826_T02 0 0 U2 GTATGAAT..GCAG GRMZM2G077125_T01 0 0 U2 GTATGAAT..GCAG GSVIVP00020710001 4 0 U2 GTGAGTAT..TCAG Glyma05g08750.1 2 0 U2 GTGAGTAT..TTAG Glyma19g00260.1 2 0 U2 GTGAGTAT..TTAG gw1.I.2506.1 1 0 U2 GTGAGTTC..ACAG GSVIVP00019684001 2 0 U2 GTTTGTGT..ATAG Glyma09g03560.1 3 0 U2 GTCAGTAC..ACAG Glyma15g14470.1 1 0 U2 GTCGGTAC..ACAG 19: 634-634 LOC_Os01g36860.2 0 0 U2 GTACGATA..TCAG 20: 644-644 estExt_fgenesh1_pm.C_1380026 3 0 U2 GTATTAAC..ACAG estExt_gwp_gw1.C_420049 3 0 U2 GTATTGTC..ACAG LOC_Os11g46240.1 2 0 U2 GTATGTTT..TCAG e_gw1.5.15871.1 2 0 U2 GTATGTCA..TCAG LOC_Os01g07740.3 5 0 U2 GTAAGTGC..GTAG Sb03g004420 4 0 U2 GTAGGTCT..GCAG AT5G14610.1 3 0 U2 GTATGAAA..GTAG LOC_Os01g36860.1 1 0 U2 GTATGCAC..TCAG GRMZM2G078826_T01 1 0 U2 GTATGATT..GTAG GRMZM2G078826_T02 1 0 U2 GTATGATT..GTAG GRMZM2G077125_T01 1 0 U2 GTATGGTT..GAAG GSVIVP00020710001 5 0 U2 GTATGGCT..CCAG Glyma05g08750.1 3 0 U2 GTATCGGC..GTAG Glyma19g00260.1 3 0 U2 GTATCAGC..TTAG gw1.I.2506.1 2 0 U2 GTATGCGT..CCAG GSVIVP00019684001 3 0 U2 GTAAGTTC..TCAG Glyma09g03560.1 4 0 U2 GTAAGTCT..TCAG Glyma15g14470.1 2 0 U2 GTAAGTTT..GCAG 21: 651-651 Glyma05g08750.1 4 1 U2 GTTTCCAC..GTAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	-----------------------------------------------------QGQQQFM -----------------------------------------------------LQIAGFK -----------------------------------------------------IQAAGFK -----------------------------------------------------IHAAGFL -----------------------------------------------------IHAAGFS -----------------------------------------------------IHAAGFS -----------------------------------------------------IHAAGFS -----------------------------------------------------VQQAGFS YLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVK----------VQQAGFS YLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKSTIYVK----------VQQAGFS -----------------------------------------------------VLQAGFS -----------------------------------------------------VLQAGFS -----------------------------------------------------VLSAGFS IFALGGANVVRCATSLGFLQIIWSALFGGPNFLRCPPAAGFNSYLVLPANGRMVYSAGFS -----------------------------------------------------IQRAGFS -----------------------------------------------------IQRAGFS -----------------------------------------------------IQRAGFA -----------------------------------------------------IQRAGFA -----------------------------------------------------IQRAGFA ------------------------------------------------------------ -----------------------------------------------------VYSAGFS -----------------------------------------------------VQNAGFS -----------------------------------------------------VQNAGFS ELMSYAVVPSFFLEGLSEPSNLPLGLYGRRGLSSCATLHQQAL----------VQNAGFS -----------------------------------------------------VQNAGFS -----------------------------------------------------VLNAGFS -----------------------------------------------------VLKAGFS -----------------------------------------------------LLSAGFP -----------------------------------------------------IYSAGFS -----------------------------------------------------IHSAGFV -----------------------------------------------------IYSAGFS ------------------------------------------------------------	22: 670-670 Glyma05g08750.1 5 0 U2 GTGGGGCT..CAAG 23: 679-679 Glyma05g08750.1 6 2 U2 GTTCGTGG..TCAG 24: 692-692 AT5G14610.1 4 0 U2 GTAAGGGA..GTAG 25: 702-702 LOC_Os01g07740.1 5 0 U2 GTTTGACC..GTAG LOC_Os01g07740.2 5 0 U2 GTTTGACC..GTAG Glyma05g08750.1 7 0 U2 GTGGCTTG..TTAG 26: 712-712 AT5G14610.1 5 0 U2 GTGCTTCT..CCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	QP---QGQQMHHQMPSQGVRP-QHFGQGASQDH---GGSHIVQPQTPQFTPQNMHYMAYQ SPTPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPAFLHLERHRNNSRLGPTVLVLAPT SPTPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPAFLHLERHRNNSRLGPSVLVIAPT NPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPT NPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRCHNNPMLGPTVLVLAPT NPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRCHNNPMLGPTVLVLAPT NPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRCHNNPMLGPTVLVLAPT APTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPT APTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPT APTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPT APTPIQAQSWPIAMKGRDIVAVAKTGSGKTLGYLLPGFILLKRLHHNSREGPTVLVLSPT APTPIQAQSWPIAIKGRDIVAVAKTGSGKTLGYLLPGFILLKRLQHNSREGPTVLVLSPT APTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPT APSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVLSPT SPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPT SPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPT SPTPIQAQSWPIAMQNQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNSTRNGPTVLVLAPT SPTPIQAQSWPIAMQNQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNSTRNGPTVLVLAPT SPTPIQAQSWPIAMQNQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNSTRNGPTVLVLAPT -------------MQSQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNSTRNGPTVLVLAPT APTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLVLSPT APTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPT APTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPT APTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLVPAFIHLKRSGNNSKMGPTALVLSPT APTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPAFIHLKRSGNNSKMGPTALVLSPT APTPIQAQSWPIALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRSCNDPRLGPTVLVLSPT SPTPIQAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLGPTVLVLSPT SPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPT SPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLIPAFILLRRRRNNVQNGPTVMVLAPT SPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLQQRRNNAQNGPTVLVLAPT SPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPT ------------------------------------------------------------
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	QNMVTSRQPN------SQQIQPNSFPSGQPNSQQIQH----------------------- RELATQIQDECVKFGRSSRITSTCVYGGAPKVPQLRDIERGADIVIATPGRLNDFLEVKR RELATQIQEECVKFGRSSRITSTCVYGGAPKGPQLRDIERGADIVIATPGRLNDFLEVKK RELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRK RELASQIQAEVVKFGQSSRVSCTCLYGGTSKVPQLRELERGADIVVATPGRLNDILEMKR RELASQIQDEVVKFGQSSRVSCTCLYGGASKGPQLRELERGADIVVATPGRLNDILEMKK RELASQIQAEVVKFGQSSRVSCTCLYGGTSKVPQLRELERGADIVVATPGRLNDILEMKR RELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRR RELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRR RELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRR RELATQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRELERGADVVVATPGRLNDILEMNK RELATQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRELERGADVVVATPGRLNDILEMNK RELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRR RELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKR RELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRR RELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRR RELATQILDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRK RELATQILDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRK RELATQILDEAMKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRR RELATQILDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRR RELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRR RELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRR RELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRR RELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRR RELATQIQDEAMKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRR RELATQIQVEAVKFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRR RELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRR RELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKM RELATQIQDETIKFGRSSRVSCACLYGGTSRNAQLKELDRGADVVVATPGRLNDILESKK RELATQIQDEVMKFGRSSRVSCTCLYGGAPKIPQLKELERGADIVVATPGRLNDILEMKR RELATQIQDEVIKFGRSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKK -----------------------CLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKK	27: 802-802 estExt_fgenesh1_pm.C_1380026 4 0 U2 GTATGTAT..GCAG estExt_gwp_gw1.C_420049 4 0 U2 GTAGGTTT..GCAG LOC_Os11g46240.1 3 0 U2 GTAAGTTC..TCAG e_gw1.5.15871.1 3 0 U2 GTGAGTTC..TCAG LOC_Os01g07740.3 6 0 U2 GTACGTTC..GAAG LOC_Os01g07740.1 6 0 U2 GTACGTTC..GAAG LOC_Os01g07740.2 6 0 U2 GTACGTTC..GAAG Sb03g004420 5 0 U2 GTATGTTG..GAAG AT5G14610.1 6 0 U2 GTAAGTGA..GTAG LOC_Os01g36860.1 2 0 U2 GTCAGTTC..TTAG LOC_Os01g36860.2 1 0 U2 GTCAGTTC..TTAG GRMZM2G078826_T01 2 0 U2 GTTTGTTC..TTAG GRMZM2G078826_T02 2 0 U2 GTTTGTTC..TTAG GRMZM2G077125_T01 2 0 U2 GTTTGTTC..GTAG estExt_Genewise1Plus.C_chr_36607 0 0 U2 GTTTGTAT..ATAG GSVIVP00020710001 6 0 U2 GTTTGTTA..TAAG Glyma05g08750.1 8 0 U2 GTAAGTAA..ATAG Glyma19g00260.1 4 0 U2 GTAAGTAA..ATAG gw1.I.2506.1 3 0 U2 GTATGCTA..TCAG GSVIVP00019684001 4 0 U2 GTATGTCA..TTAG Glyma09g03560.1 5 0 U2 GTTTGTCC..GTAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	-NIHGQPY----DNQQDFKTGF-PKTKD--TEFKNGSQVGVSPSQYQQRSALPVQNNQNV VSLRQVSYLVLDEADRMLDMGFEPQIRKIVNEIPSRRQTLMYTATWPKEVRKIAGDLLIN ISLRQVSYLVLDEADRMLDMGFEPQIRKIVNEILSRRQTLMYTATWPKEVRKIAGDLLIN ISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLKD INLHQVSLLVLDEADRMLDMGFEPQIRKIVDELPNARQTLMYTATWPKEVTKIAGDLLRD ISLHQVSLLVLDEADRMLDMGFEPQIRKIVDEIPNTRQTLMYTATWPKEVTKIAGDLLRD INLHQVSLLVLDEADRMLDMGFEPQIRKIVDELPNARQTLMYTATWPKEVTKIAGDLLRD VSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSN VSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSN VSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSN VSLRQVSYLVLDEADRMLDMGFEPQIRKIVKQIPPRRQTLMYTATWPKEVRKIASDLLNN VSLRQVSYLVLDEADRMLDMGFEPQIRKIVKQIPPRRQTLMYTATWPKEVRRIASDLLNN ISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVN ISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVN ISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVH ISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVH VSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMYTATWPKEVRRIADDLLVH VSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMYTATWPKEVRRIADDLLVH VSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMYTATWPKEVRRIADDLLVH VSLKQVSYLVLDEADRMLDMGFEPQIRKIVKEMPHRRQTLMYTATWPKEVRRIADDLLVH VSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN ISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVN ISLHQVSYLVLDEADRMLDMGFEPQIRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVN ISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVK ISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVRKIAADLLVK VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN VSLNQVKYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN IDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVN IDLGQISLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVN IDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPQRQTLMFTATWPKEVRKIASDLLVH IDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVN IDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVN
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	PAEVTSGQVPNAGANAGQPQQFRGFSGSVQQS--PSAVQTQQGGSDSFY---------QH PVQVNIGNTDELAANKSITQNVEVVVPYEKQRRLEQILRSQEPGSKIIIFCSTKRMCDTL PVQVNIGNTDELSANKSITQHVEVVVPYEKQRRLEQILRSQEPGSKIIVFCSTKRMCDML PVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQL PVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILGDQERGSKIIIFCSTKKMCDQL PVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILRDQERGSKIIIFCSTKKMCDQL PVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILGDQERGSKIIIFCSTKKMCDQL PVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQL PVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQL PVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQL PVQVNIGNTDQLVANKSITQHVEVIPHMEKSRRLDQILRSQDPGSKIIIFCSTKRMCDQL PVQVNIGNTDQLVANKSITQHVEVIPHMEKSRRLDQILRSQDPGSKIIIFCSTKRMCDQL PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQL PAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQL PVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQL PVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCDQL PVQVTIGSVDSLVANSSITQHVEIITPSEKQRRLEQILRSQDSGSKILIFCTTKRMCDQL PVQVTIGSVDSLVANSSITQHVEIITPSEKQRRLEQILRSQDSGSKILIFCTTKRMCDQL PLQVTIGNVDELVANSAITQHIEVITPSEKQRRLEQILRSQVSGSKILIFCTTKRMCDQL PVQVTIGSVDELVANSAITQHVEVITPSEKQRRLEQILRSQDSGSKILIFCTTKRMCDQL PVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTKKMCDQL PVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQL PVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKIIIFCSTKKMCDQL PVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDSGSKIIIFCSTKKMCDQL PVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFCSTKKMCDQL PVQVNIGNVDELVANKSITQYVELLAPLEKHRRLEQILRSQESGSKIIIFCSTKKMCDQL PVQVNIGNIDELVANKSITQHVELLAPLEKHRRLEQILRSQEPGSKIIIFCSTKKMCDQL PVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHL PVQVNIGSVDELAANKAITQYVEVVSPPEKQRRLEQILRSQERGSKVIIFCSTKKLCDQL PVQVNIGSVDVLSANKSITQYVEVVPQMEKDRRLEQILRTQERGSKAIIFCSTKRLCDQL PVQVNIGNVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQL PVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQL	28: 919-919 estExt_fgenesh1_pm.C_1380026 5 0 U2 GTTCGAAT..GCAG estExt_gwp_gw1.C_420049 5 0 U2 GTTTGAAA..GCAG LOC_Os11g46240.1 4 0 U2 GTATTTAT..GCAG e_gw1.5.15871.1 4 0 U2 GTATTCTG..GCAG LOC_Os01g07740.3 7 0 U2 GTAATGAA..GCAG LOC_Os01g07740.1 7 0 U2 GTAATGAA..GCAG LOC_Os01g07740.2 7 0 U2 GTAATGAA..GCAG Sb03g004420 6 0 U2 GTGAGTCA..GCAG AT5G14610.1 7 0 U2 GTCTGGGT..ACAG LOC_Os01g36860.1 3 0 U2 GTTTGTTC..GCAG LOC_Os01g36860.2 2 0 U2 GTTTGTTC..GCAG GRMZM2G078826_T01 3 0 U2 GTATGTGT..GCAG GRMZM2G078826_T02 3 0 U2 GTATGTGT..GCAG GRMZM2G077125_T01 3 0 U2 GTATGAGA..GCAG estExt_Genewise1Plus.C_chr_36607 1 0 U2 GTATGGGA..GCAG GSVIVP00020710001 7 0 U2 GTGTGGAA..GCAG Glyma05g08750.1 9 0 U2 GTTTGATG..TCAG Glyma19g00260.1 5 0 U2 GTTTGATG..TCAG gw1.I.2506.1 4 0 U2 GTCTGAAC..TCAG GSVIVP00019684001 5 0 U2 GTAAACTT..GCAG Glyma09g03560.1 6 0 U2 GTATTTAA..GCAG Glyma15g14470.1 3 0 U2 GTATTTAA..GCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	VPNFQNQMNPGMMHGH-------------------------------------------- SRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDIRVVVNYDF SRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDIRFVVNYDF ARDIGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDF ARGIGRNFNAVSIHGDKSQAERDNVLNQFRTGRASVLVATDVAARGLDIKDIRVVINYDF ARGIGRNFNAVSIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDF ARGIGRNFNAVSIHGDKSQAERDNVLNQFRTGRASVLVATDVAARGLDIKDIRVVINYDF ARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDF ARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDF ARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDF ARNLSRQYGASAIHGDKSQAERDSVLNDFRSGRCPVLVATDVAARGLDIKDIRIVVNYDF ARNLSRQYGASAIHGDKSQSERDSVLNDFRSGRCPVLVATDVAARGLDIKDIRVVVNYDF TRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDF ARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDF ARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARTLTRQFGASAIHGDKSQSEREKVLNQFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARTLTRQFGASAIHGDKSQSEREKVLNQFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARTLTRQFGASAIHGDKSQSEREKVLNHFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARTLTRQFGASAIHGDKSQSEREKVLNHFRSGRSPILVATDVAARGLDIKDIRVVINYDF ARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVINYDF ARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDF ARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDF ARNLTRQFGAAAIHGDKSQAERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDF ARNLTRHFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNYDF SRNLTRQFGAAAIHGDKSQSERDYVLSQFRTGRSPILVATDVAARGLDIKDIRVVINYDF ARNLTRQFGAAAIHGDKSQSERDHVLSQFRTGRSPILVATDVAARGLDIKDIRVVVNYDF ARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDF ARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDF ARSIGRNFGAAAIHGDKSQGERDWALNQFRSGKSPILVATDVAARGLDIKDIRIVINYDF ARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDF ARSIGRTFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDF	29: 1011-1012 estExt_fgenesh1_pm.C_1380026 6 2 U2 GTATTATT..CCAG estExt_gwp_gw1.C_420049 6 1 U2 GTTTACTT..AGAG LOC_Os11g46240.1 5 2 U2 GTGAGGCT..TCAG e_gw1.5.15871.1 5 2 U2 GTGAGGCT..CCAG LOC_Os01g07740.3 8 2 U2 GTTGGGAC..ACAG LOC_Os01g07740.1 8 2 U2 GTTGGGAC..ACAG LOC_Os01g07740.2 8 2 U2 GTTGGGAC..ACAG Sb03g004420 7 2 U2 GTAGGGCT..ACAG AT5G14610.1 8 2 U2 GTATGAAT..ACAG LOC_Os01g36860.1 4 2 U2 GTACTCCA..ACAG LOC_Os01g36860.2 3 2 U2 GTACTCCA..ACAG GRMZM2G078826_T01 4 2 U2 GTTAGACT..ACAG GRMZM2G078826_T02 4 2 U2 GTTAGACT..ACAG GRMZM2G077125_T01 4 2 U2 GTTAGACT..ACAG estExt_Genewise1Plus.C_chr_36607 2 2 U2 GTTAGACT..ACAG GSVIVP00020710001 8 2 U2 GTAAGAGG..ACAG Glyma05g08750.1 10 2 U2 GTTGTTAA..GCAG Glyma19g00260.1 6 2 U2 GTTGTTAA..GCAG gw1.I.2506.1 5 2 U2 GTTAGGGA..TCAG GSVIVP00019684001 6 2 U2 GTCTGTTC..TCAG Glyma09g03560.1 7 2 U2 GTTAGCCT..ACAG Glyma15g14470.1 4 2 U2 GTTAGCCT..ACAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	PSNVHAIGQKMGHEDKLPGRAGNEYYYNSNKEMP-----------AMGRQQVDMTQMPI- PTGVEDYVHRIGRTGR-AGATGLAYTFFSEQDGKYAKELIKVLEGANQKVPPELKDIASR PTGVEDYVHRIGRTGR-AGATGLAYTFFSEQDGKYAKELIKVLEGANQKVPQELKDIASR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKYAGDLVKVLEGANQHVPPELQEMAAR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKYACDLVKLLQGANQLVPPQLQDMAAR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKYAGDLVKLLQGANQHVPPQLQDMAAR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKYACDLVKLLQGANQLVPPQLQDMAAR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR PTGVEDYVHRIGRTGR-AGATGSAYTFFGDQDSKYASELVKILEGANQSVPPQLKEMALR PTGVEDYVHRIGRTGR-AGATGSAYTFFGDQDSKYASDLVKILEGANQSVPQQLKEMALR PNGVEDYVHRIGRTGR-AGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATR PNGVEDYVHRIGRTGR-AGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATR PTGIEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASR PTGIEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLEDMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLEDMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQQVPRDLEDMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFCDQDSKYAADLIKILEGANQKVPRDLEDMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEIRDMASR PTGVEDYVHRIGRTGR-AGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSR PTGVEDYVHRIGRTGR-AGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSR PTGVEDYVHRIGRTGR-AGATGLAYTFFGDHDAKYASDLIKVLEGANQKVPPELRDMSSR PTGVEDYVHRIGRTGR-AGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPPELRDMSSR PTGVEDYVHRIGRTGR-AGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEIRDMASR PTGVEDYVHRIGRTGR-AGATGVAYTFFGDQDAKYASDLIKVLEGANQLVPPEIRAMASR PTGVEDYVHRIGRTGR-AGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDCKYAADLIKVLEGANQRVPPEVRDMALR PSGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKYAADLVKLLEGANQHVPVEVREMALR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALR PTGIEDYVHRIGRTGR-AGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALR
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ GGGMFKGR--MG-NRW-----G-----GDSGGR--------------------------- GGGMFKSR--TG-NRW--------GGDSGKGGR--------------------------- GAAGAPRNQAGGMSRWDGPGGGGNRFESAVGIPGSYGGIRDGPGGFGGRDGPGGFGGRDG SASGGPRNQASGMSRWDGP--GGRGFEPGVGGPVGYGGVREGPGGFGGREGPGGLGVRES SASGGPRNQAAGMSRWDGP--GGRRFDPGAGGPVGYGGVREGPGGFSGREGPGGFGVRES SASGGPRNQASGMSRWDGP--GGRGFEPGVGGPVGYGGVREGPGGFGGREGPGGLGVRES GGYGG-RS-----RRW-----------ASSDDS--------------------------- GGYGG-RS-----RRW-----------ASSDDS--------------------------- GGYGG-RS-----RRW-----------ASSDDS--------------------------- GGYGG-RS-----RRW-----------ASSDDS--------------------------- GGYGG-RS-----RRW-----------ASSDDS--------------------------- GGGGMNKF-----SRW-----G-----PPSGGR--------------------------- GGGGMNKF-----RRW-----G----TPSSGGG--------------------------- GGRGGRKR-----NRW--------ATRSDRGGS--------------------------- GGRGGRKR-----NRW--------ATRSDRGGS--------------------------- GGGRGRKR-----NHW--------ASRPDRGGS--------------------------- GGGRGRKR-----NHW--------ASRPDRGGS--------------------------- GGGRGKKR-----NRW-----A-SRSER--GGPR-------------------------- GGGRGRKR-----NRW--------ASHSDRGGS--------------------------- GGGMG-RS-----RRW-----G-----SGTGGR--------------------------- GGGGFSRS------KY------------RTGGR--------------------------- GGGGFSRS------KY------------RTGGR--------------------------- SGGGMGRS-----RRW------------GSGGR--------------------------- SGGGMGRS-----RRW-----G-S------GGRG-------------------------- GGGGMGRF-----RRW------------GSGGH--------------------------- GGGVMGRF-----RRW-----G-----SGSGGR--------------------------- GGGGGGPGYSQD-RRG-----MVNRFDSGGGGT--------------------------- SGPGFGKD------RG-----GVNRFDSGGGGG--------------------------- GGPSFGKD------RG-----GLNRFDAGRGGG--------------------------- GPSNFGKD------RG-----GMSRFDSGGGGG-G------------------------- GPSNFGKD------RG-----GVSRFDSGGGGG---------------------------
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------------------------------D PGGFGGRDGPGGFIGREGPGGFGGREGPVGFGG-----------QESPGGFGGRKGPGAF PAMFG------------GPGGFGDREGPGGFSGHEGHGGFGGREREGPGGFVGRKGPGGF PAMFGGREGPDGLGGRAGPGGFGSREGPGGFGGHEGPGGFGG--REGPGGFGGRKGPGGF PAMFG------------GPGGFGDREGPGGFSGHEGHGGFGGREREGPGGFVGRKGPGGF -----------------------------------------------------------Y -----------------------------------------------------------Y -----------------------------------------------------------Y -----------------------------------------------------------Y -----------------------------------------------------------Y ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------------------HSELDSRY ----------------------------------------------------HSELDSRY ----------------------------------------------------RSELDSRY ----------------------------------------------------RSELDSRY --------------------------------------------SELDSR---------Y --------------------------------------------------------RSEL -----------------------------------------------------------D ----------------------------------------------GDSGFGAKSYDSGY ----------------------------------------------GDSGFGAKSYDSGY ------------------------------------------------------GGDSGY --------------------------------------------GHGDSG---------Y -----------------------------------------------------------D -----------------------------------------------------------D ----------------------------------------------------RWDSGGGF --------------------------------------------RWDSGGRGSGMRDGGF --------------------------------------------RWA------------S --------------------------------------------RWDTGGRGG------F --------------------------------------------RWDTGGRGGMRDGG-F
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ GGRDGGRSS---YRGGRG--------------------DFGGRGSSY------------- GGRSSY--G-----GGRG--------------------DFGGRGGF-------------- EGREGAAPG---SFGGRG---------------GRGPGGFGGRGGGSPGGFGGRGGRGDS GGRDGPGSS---GFGGRG---------------QRGSGGFGSRGAILLVLVDAAGVIFPV GGRDGPGSG---GFGGRG---------------ERGSGGFGSRGGASPGGFGGRGGRGDS GGRDGPGSS---GFGGRG---------------QRGSGGFGSRGGASPGGFGGRGGRGDS GGRGYD--S---GYTSRS--------------TDNYNSGYGSQSGNGSSFHSSF------ GGRGYD--S---GYTSRS--------------TDNYNSGYGSQSGNGSSFHSSF------ GGRGYD--S---GYTSRS--------------TDNYNSGYGSQSGNGSSFHSSF------ GSQ---------GYGAKR------------STDSFKNSSFGNQAGGGSSFHSSF------ GGQ---------GYGAKR------------STDSFNNSSFGNQAGGGSSFHSSF------ -GRGGD--S---GYGGRG--------------------SFASR----------------- GGRGGYGDS---GYGGRG------------------ESGYGSRGDSGYGGRGDSGGRGSW GGRDGL--S---GSSGRL------------------DSSRSSRRHDYGD----------- GGRDGL--S---GSSGRL------------------DSSRSSRRHDYGD----------- SSRDGL------ASSGKS------------------ESGRGSRGRDDNGSRGRYDPGET- SSRDGL------ASSGKS------------------ESGRGSRGRDDNGSRGRYDPGET- SGRDGL--A----SSGR------------------SESGRGSHGRDDYGSRGRYDSGET- DSRSGR------GSHGRD--------------------DYGSRGRYDSGET--------- GGRGGRNDS---SYGGRD----------------------GGRGGWGMAPSSS------- GGKGND--G---GYGGRV-----------------GDSSYGGRGG--------------- GGKGND--G---GYGGRV-----------------GDSSYGGRGG--------------- GGRNND--S---GYGGRG-----------------NDAGYGGRGSDSNYG---------- GGRNND--S---GYGGRG-----------------NDAGYGGR-----GSDSNYGGRG-- GGRGGRSDF---GYGGRG--------------------SWGDR----------------- GGRGGHSDF---GYGGRD----------------------GGRG---------------- GGRGGGFSGREGGFGGRE-------------------GGFGGREGGFGGRGGRFGMRDDS GGRGSG--MRDGGFGGRG---------------GMRDGGFGGRGGMRDGAVGGHSGRNDF GGRGGMRDG---GFGGRG------------------------------------------ GGRGGG--MRDGSFGGRGSGFGGRGGGIRDGGFGGRGGGFGGRGGMRDGGSGQ-GGRGDF GGRGGG--MRDGGFGGRGGGFGGRGGGMRDGSFGGRGGGFGGRGGIRDGGSGQ-GGRGDF	30: 1217-1217 gw1.I.2506.1 6 1 U2 GTTGGGGA..TCAG 31: 1242-1243 LOC_Os01g36860.1 5 2 U2 GTATTTTC..ACAG LOC_Os01g36860.2 4 2 U2 GTATTTTC..ACAG estExt_Genewise1Plus.C_chr_36607 3 2 U2 GTAAACTT..ACAG 32: 1251-1251 LOC_Os01g07740.3 9 2 U2 GTATGTAT..GCAG LOC_Os01g07740.1 9 2 U2 GTATGTAT..GCAG LOC_Os01g07740.2 9 2 U2 GTATGTAT..GCAG Sb03g004420 8 2 U2 GTGTGTAT..GCAG GRMZM2G078826_T01 5 2 U2 GTAAACTT..ACAG GRMZM2G078826_T02 5 2 U2 GTAAACTT..ACAG GRMZM2G077125_T01 5 2 U2 GTAAACTT..ACAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ----------------------------------GGGRDGGGRDGGR------------- ----------------------------------YGGGRDGGRFDSRDRYG--------- HGFGGRGRGDFSGFGGRGRGDSSGFGGRG-----RGDFSGGRGGRGRGFGGRGRSDRGPH LVDEVGEIFLVGAVAGA-----------------VDLVAGDVLTGLSQM----------- PGFGGRGRGDFSSFGGRGRGDSPGFGGRG-----RGDFSGGRGGRGRGFGGRGRSDRGPH PGFGGRGRGDFSGFGGRG----------------RGDFSGGRGGRGRGF-----GGRGRS ----------------------------------HNSNSGNQFGDTSGF----------- ----------------------------------HNSNSGNQFGDTSGF----------- ----------------------------------HNSNSGNQFGDTSGF----------- ----------------------------------HNSSSGNQFGDTTSF----------- ----------------------------------HNSSSGNQFGDTTSF----------- ------------------------------------DRSSNGWGR--------------- AP--------------------------------SRDSGSSGWGR--------------- ----------------------------------DGRSRRSGRGRSRSRSRSD------- ----------------------------------DGRSRRSGRGRSRSRSRSD------- ----------------------------------DGRSRRSTRGRSRSRSKSD------- ----------------------------------DGRSRRSTRGRSRSRSKSD------- ----------------------------------DGRSRRSARGR--------------- ----------------------------------DGRSRRSARGRSRSRSRSH------- ----------------------------------SRLERGGGRGADQD------------ ----------------------------------YGSSAAFGRGGGRGF----------- ----------------------------------YGSSAAFGRGGGRGF----------- ----------------------------------GRGTSASGRGGGRGFDYESQ------ -------------------------------------TAASGRGGGRGF----------- ---------------------------------------SKSWNH--------------- ------------------------------------------------------------ FGRGGNRGRGFTGPDAGHMNVGGRGGFGRFGNNNNMESRGFGRGSGRGFGRGVGRFDNRR FSGRGNRGRGFGGPGGGNVGWGRNERGLHDR---YSNMDGRGRGRGRGR----------F ------------------------------------------------------------ FPGRGNRGRGSGGPRGGHVGWGRGERGMDDRYNMEGRGQGRGRGR--------------F FPGRGNRGRGSGGPRGGHVGWGRGERGMDDRYNMDGRGQGRGRGR--------------F	33: 1296-1296 AT5G14610.1 9 2 U2 GTAAATTA..GCAG 34: 1313-1313 Glyma05g08750.1 11 2 U2 GTTAGTTT..ATAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	----------------------------------------SRNPQ----VLFSCLKFK-- ------------------------------------FDSRDRYGD----RLGDRSHDRYG ------------------------------------DRLPDRSHD----RYVAPGGARYG DRFISDGRGRYDNRRGFGGKGR--------------DRSYSRSPD----RGRSRGYDRRS ------------------------------------DGDDMITVE----DLETRVGIGAT DRFVSDGRGRYDNRRGFGDKGR--------------DRSYSRSPD----RGRSRGYDRRS DRFVSDGRGRYDNRRGFGDKGR--------------DRSYSRSPD----RVRARGYDRRS ------------------------------------QTSFHNSSS----NNQTSDNPSFH ------------------------------------QTSFHNSSS----NNQTSDNPSFH ------------------------------------QTSFHNSSS----NNQTSDNPSFH ------------------------------------HASYGNSSQ----NNQTGDNPSFP ------------------------------------HGSYDNSSR----NNQTGDNASFP ------------------------------------ERERSRSPE----RFNRAPPPSST --------------------------------------ERSRSPE----RFRGGPPSTSS ------------------------------------SDRYSRSPK----RSRRHSRSRTR ------------------------------------SDRYSRSPK----RSRRHSRSRTR ------------------------------------SRSRSPSPK----KSRRHEGRRSR ------------------------------------SRSRSPSPK----KSRRHEGRRSR ------------------------------------SRSRSPSPK----RSHHHEARRSR ------------------------------------SRSRSPSPK----RSRRHEARRSR ------------------------------------QRDRYLYLL----TYFSCLSLGFL DNDSQSFYTPDDFGFLKGFVSMFLSDSHIYRFVLWHRNDRDQSPD----RGSSW-SDRFK DNDSQSFYTPDDFGFLKGFVSMFLSDSHIYRFVLWHRNDRDQSPD----RGSSW-SDRFK ------------------------------------RNDRDRSPD----KGSSW-RDRFK DHDSQ-------------------------------RNDRGRSPD----KGSSW-SDRFK ------------------------------------DKSHSRSPD----R---------- ------------------------------------SHNHNRSPD----KGSGWGDHSKS ------------------------------------GRSRSRSPDLVRPRRRSSSYSRSR DNRRDVADRSR-------------------------GRSYSSSPE----KVRTWGYSRSS ------------------------------------------------------------ DNRRDVSSKGR-------------------------GRSHSRSPE----RVRTWDYSKSS DNRRDVSYKGR-------------------------GRSYSRSPE----RVRTWDYSRSS	35: 1324-1324 Glyma19g00260.1 7 2 U2 GTTAGTTT..ATAG 36: 1357-1357 LOC_Os01g07740.3 10 2 U2 GTACAAAA..ACAG LOC_Os01g07740.1 10 2 U2 GTACAAAA..ACAG LOC_Os01g07740.2 10 2 U2 GTACAAAA..ACAG Sb03g004420 9 2 U2 GTATGGTG..ACAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ PP---------------------------DGVIAGVPAGRGHTVAAGAAATTGTVMTGVE EK------------------DKSKNRSRSYSRSP--SRSRAYSRSRSRSYERYSDSRGRD GSRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSR--SPSRSRSRSYDQGAGPARRPRPRS AAARIESGHGVMTEEVTAGALVGAGVAAGAGHAA--EAAAGAGAEAAAGVTAGAGVVTMG DS-RSISRSRSRSRSWSRSRSRSRSWSRSRSRSS--SRSRSRSRSRDHGAAPERRPRARS DSRSI-SRSRSRSRSWSRSRSRSRSWSRSSSRSH--SRSRSRDHGAAPERRPRA----RS AS---------------------SNNDQPGDGLS--FHARFYSSSRGSDQSRTNNAGFRD AS---------------------SNNDQPGDGLS--FHARFYSSSRGSDQSRTNNAGFRD AS----------------------NNDQPGDGLS--FHARFYSSSRGSDQSRTNNAGFRD PS---------------------SSNNQSGDGLS--FHERFYG-SRGRDESRSNNDGFRA PS---------------------SSNNQSGDGLS--FHERFYG-SRGRDQSKTSNDGFRA GS---------------------------------------------------------- ------------------------------------------------------------ SRSRSRSRSYTRNRRASRSRSRSPGASRRHERSATGSGSALPDSGHGERKRTPEADPSRN SRSRSRSRSYTRNRRASRSRSRSPGASRRHERSATGSGSALPDSGHGERKRTPEADPSRN TK----SRSRSRS-------RRNHGASHSKSRSP--VASRRYEKTASGSARPN-----SG TK----SRSRSRS-------RRNHGASHSKSRSP--VASRRYEKTASGSARPN-----SG S------RSRSRS-------CRNFRASRSKSHSP--VASSRHEKAAVISGSTQPN---LG TK---------------------------------------------------------- SP-----------------------------------FSLPPAFLWRGALSYEFFDLFRI TV----NRERSRS-------PVKGAPSQNAPVSF--HQAMMQRSGGGSDRNKSFS---RE TV----NRERSRS-------PVKGAPSQNAPVSF--HQAMMQRSGGGSDRNKSFS---RE SV----NRDRSRS------PNRAALPQHSQGGSF--HKAMMERGGWDSDRNKSFN---RD SV----NRDRSRS------PDRAALPQHSQGGSF--HKAMMERGGGGGDRNKSFN---RD ------------------------------------------------------------ LN--------------------------------------------------------RD SRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHN---RSRSYSRSPSPVYERRDRAPRVS SR--SRSRSRSRSRSWSRSRSRSPRRSHSRSRSP--RGSRSPGRSRSRSRSQGYDRYERS ------------------------------------------------------------ SR----SRSRSRSRSWSRGRSRSRSWSRGRSRSY--SRSISPRRSRSRSRGRSYS---RS SR----SRSRSRSRSWSRGRSRSRSWSRGRSRSY--SRSISPRRNRSRSRGRSYS---RS	37: 1380-1380 LOC_Os01g07740.3 11 2 U2 GTTAGTTG..ATAG LOC_Os01g07740.1 11 2 U2 GTTAGTTG..ATAG LOC_Os01g07740.2 11 2 U2 GTTAGTTG..GCAG Sb03g004420 10 2 U2 GTGTGTAT..ACAG 38: 1410-1410 estExt_fgenesh1_pm.C_1380026 7 1 U2 GTAGGTAT..GCAG 39: 1418-1418 LOC_Os01g07740.3 12 2 U2 GTATGCCT..GCAG LOC_Os01g07740.1 12 2 U2 GTATGCCT..GCAG LOC_Os01g07740.2 12 2 U2 GTATGCCT..GCAG Sb03g004420 11 2 U2 GTACTTTA..GCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ SVVDPHPVGGHTLLAEDGAEDVENNSNS-------------------------------- RSRSPASRRSY-------SPDGGRGGRR-------------------------------- GFDVLPPATGAGPASTGPGPVAVPAPGS----------------------AGPVPPQVPA QHRSAGPEQDPASMCCLLQLELLDLHLF-------------------------------- GFDVLPPATGA----AGPAPVPVPVPGP---------------------AGPPVPALAPQ GFDVLPPATGA----AGPAPVPVPGPAA-----------------------PPVPAPAPE RSRSPPSNRNH----EDPGSKAVGVSNW-------------------------------- RSRSPPSNRNH----EDPGSKAVGVSNW-------------------------------- RSRSPPSNRNH----EDPGSKAVGVSNW-------------------------------- RSRSPG--------------KPVEVSNW-------------------------------- RSRSPPG-------------KPVGVSNW-------------------------------- -----PPRSFH---------ETMMMKHR-------------------------------- -----PPRSFH---------EAMMMKNR-------------------------------- HTNHSDPKDDRHPEDGKVGKVDLDRSPT------------------------PQDKSGPY HTNHSDPKDDRHPEDGKVGKVDLDRSPT------------------------PQDKSGPY HAEHKSPPRSH-----SRDDHVNHSDHKDDHKDDHMEDGKMERVDLDRSPSPHDDKSAPY HAEHKSPPRSH-----SRDDHVNHSDHK-------------------------------- YAEHKSPPRSH----SGDD-HVNHPDQK----DDHMGDGKMERVDLDRSPSPQYDKSAPY ------SRSRS------------------------------------------------- YRNYITYSCCY---------EDIEF----------------------------------- RSRSRSPQKGW---GGSSGDGRNGGSHS-------------------------------- RSRSRSPQKGW---GGSSGDGRNGGSHS-------------------------------- RSRSPSPHRQV-KGPAVREHSPVYSFHR-------------------------------- RSRSPSPHRQE----KCPA-VRDRSPVY------------------------------SF HDRAPPVRSFH---------QAMMEKGR-------------------------------- RSRSRSPD---------------------------------------------------- GFDIKPPVESVVNLDMNAAAAIENVVPT-------------------------------- HDRHFDQKDLTQPEAQVPPESTMSPMSP-------------------------------- ------------------------------------------------------------ RSRSPSYDRRD----RSDQQLPDQKDIR-------------------------------- HSRSPSYDRRN----RSDQQLPDQKDLR--------------------------------	40: 1467-1467 GRMZM2G078826_T02 6 0 U2 GATGACCA..TGAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	------------------------------------------------------------ ----------------------------------------------------------YE ------------------------------------------------------------ QSLADASAMSPMSPGGLAQEGAPFN---GGNDGGLVPAQGVLPFQGSDVAMPPNFAAAEA ------------------------------------------PYLDQQHRLFLLRHLNNH QSLADTSSMSPMSPGVLVQAPAAAPLICGGNDNSFGATPTGQPFQGTDGAFPSF-PAGET QSLANTSSMSPMSPGGLVQP---------------AAAPAGGQPSQGTGAAFPSSPAGET ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ SPAYNGKTSRSVSPGNQVEGNNKAAEVSKNPDPSSPPHHGKTREDEEEGMIDEDGEIADD SPAYNGKTSRSVSPGNQVEGNNKAAEVSKNPDPSSPPHHGKTREDEEEGMIDEDGEIADD SPVYNGKASGSMSPNGQPEAGAKFVEPSGKPEPASPVRCSKGRDDDEEGIIDEDGEIGED -----------------------------------------------------------D SPAYNGKASDSMSPNVQPKADAKYVKPSGKPEPASPLRHSKGRDDD-EGIIDDDGEIAEG ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------------YNGELEEGMIPDED----- -----------------------------------------YNGELEEGMIPDED----- --SMMGRGQSSPSSQRQRACSPHRNSTPSQGDGRHGGSHSSYNGEVEEGMIPEEEGMIGQ HQSMMGRGQSSPSSQRQRARSPHRNSPPSQGDGRYAGSHSSYNGEVEEGMIPEEEGMIGQ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------SLSERQGNGVVESEVEAALV ------------------------------GTQAFPPQEFPGGDLDAHPPVVETTEQGHP ------------------------------------------------------------ -----------------------------------------------AHEVVNFDQFVMA ---------------AQEVGTSDPRMLPVSSGSGSQGNSFLGTEQVEQQPVVSSTDAGNP	41: 1549-1549 Glyma09g03560.1 8 0 U2 GTAGGAAC..GCAG
Lj~chr6.LjT36O06.40.nd Pp~estExt_fgenesh1_pm.C_1380026 Pp~estExt_gwp_gw1.C_420049 Os~LOC_Os11g46240.1 Zm~GRMZM2G703415_T02 Sb~e_gw1.5.15871.1 Zm~GRMZM2G703415_T01 Os~LOC_Os01g07740.3 Os~LOC_Os01g07740.1 Os~LOC_Os01g07740.2 Zm~GRMZM2G066440_T01 Sb~Sb03g004420 At~AT3G01540.1 At~AT5G14610.1 Os~LOC_Os01g36860.1 Os~LOC_Os01g36860.2 Zm~GRMZM2G078826_T01 Zm~GRMZM2G078826_T02 Zm~GRMZM2G077125_T01 Sb~estExt_Genewise1Plus.C_chr_36607 Vv~GSVIVP00020710001 Mt~AC144760_39.2 Mt~AC174364_26.2 Gm~Glyma05g08750.1 Gm~Glyma19g00260.1 Pt~gw1.I.2506.1 Pt~gw1.XVII.662.1 At~AT3G06480.1 Vv~GSVIVP00019684001 Pt~gw1.X.746.1 Gm~Glyma09g03560.1 Gm~Glyma15g14470.1	-------------- LSRCCGENFLKTVF -------------- FPGPAVEQEAPDV- WLIHLQCHRCLLVA FPGAAVQQAAPDV- FPGAAAQHPAPDV- -------------- -------------- -------------- -------------- -------------- -------------- -------------- PRANATVQNGGDN- PRANATVQNGGDN- DPRANAAVQNGNN- DPRANAAVQNGNN- EMMMKVS------- -------------- -------------- -------------- -------------- DDPVNVD------- DDPVNVN------- -------------- -------------- RPVVDEEP------ LTGDESFHHPAPEP -------------- HQACLFAKGTCKCL EAVADLSHQSASDI