SRGD Gene ID 649 BLASTp at NCBI n/a n/a  
OrganismsGm ,Mt ,Pp ,Lj ,Vv ,Sb ,Pt ,Os ,At ,Zm
Gene count12
Cintron count16
Cintron classesU2 ,im ,absent ,em ,GC
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIQCATCGTYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIQCGTCGTYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKIPRRRQPKNQQIKVRMMLPMSIRCGTCGTYIYKGTKFNSRK
MGERKVLNKYYPPDFDPAKIPRRKQPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPAKLPRVRRPENLQINVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKLPRIRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPSKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
2: 0-0
AC157535_30.2 0 0 U2 ..
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
EDVIGETYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWRDQDEAADK
EDVVGETYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWRAQDEAADK
EDVEGEKYLGIQIFRFYFKCTKCSAEITFKTDPQNSDYTVESGASRNFEPWREEDEVADR
EDVEGETYLGIQIFRFYFKCSKCSAELTMKTDPQNSDYIMETGASRNYEPWRATDEATDE
EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEETDE
EDVIGETYLGIQIFRFYFKCTRCSAELAMKTDPQNSDYTVESGATRNFEPWRAEDEELDT
EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK
EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEEAES
EDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEETDK
EDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEEADK
EDVIGETYLGIQIFRFYFKCTKCSAEVTMKTDPQNSDYIVESGATRNFEPWRAEDEEADK
EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK
3: 65-65
estExt_Genewise1Plus.C_chr_37003 0 0 U2 GTAGGCCT..GCAG
LOC_Os01g40610.1 0 0 U2 GTAGGTTG..GCAG
e_gw1.294.23.1 0 0 U2 GTGAGGAA..GCAG
estExt_Genewise1_v1.C_LG_XI3018 0 0 U2 GTATTTTT..GCAG
AT1G17130.1 0 0 U2 GTAATTGA..GCAG
Glyma13g33280.1 1 0 U2 GTTTGATT..GCAG
Glyma15g39810.1 1 0 U2 GTTTGATT..GCAG
Glyma15g39810.2 1 0 U2 GTTTGATT..GCAG
4: 115-115
estExt_Genewise1Plus.C_chr_37003 1 0 U2 GTAAGTGA..TCAG
LOC_Os01g40610.1 1 0 U2 GTGGGTGA..TCAG
e_gw1.294.23.1 1 0 U2 GTTTGATC..TCAG
estExt_Genewise1_v1.C_LG_XI3018 1 0 U2 GTAAAAAT..GTAG
AT1G17130.1 1 0 U2 GTAAAGAC..ACAG
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
EKRKRDAEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVSVDQMLEILKRSA
EKIKRDAEEMGDAMKALENRAMDSKQDMDILAALEEMRSMKSRHAGVSVDQMLEILKRSA
EKRKRDEEEMGDAMRALENRAMDSKQDMDILAALEEMRSMKSRHAGVTVDQMLEILKRSA
AVKKREAEELGDAMKALENRTLDSKQEMDIMAALDEMKSMRSRHATVAVEDMMAALRRTA
MKKKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVAEMLVALQRTA
EKKKRVAEEMGDAMKSLENRTLDSKREIDILAALDEMKSMKSRHATVSVDAMLEALQRTA
DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG
QKQKRDAEEMGDVMKSLENRTLDSKREMDILAALDEMKSMRSRHATVTVDEMLEALQNTA
MKEKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLEALQRTA
TKEKRDAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVTVDEMLEALQRTA
TKEKRDAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVTVDEMLEALQRTA
------------------------------------------------------------
5: 160-160
estExt_Genewise1Plus.C_chr_37003 2 0 U2 GTTGGACC..ACAG
LOC_Os01g40610.1 2 0 U2 GTAGAATA..GCAG
e_gw1.294.23.1 2 0 U2 GTATGTTC..GCAG
estExt_Genewise1_v1.C_LG_XI3018 2 0 U2 GTAATTAA..GCAG
AT1G17130.1 2 0 U2 GTATGACA..GCAG
Glyma13g33280.1 2 0 U2 GTACTTGC..CCAG
Glyma15g39810.1 2 0 U2 GTACTTAC..CCAG
Glyma15g39810.2 2 0 U2 GTACTTAC..CCAG
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
HGKEEKAIAELDEEDEELIKSITFRNSGFYVKRIEDDDDD---DDDDDDDLVPGQSSRTI
HEKEEKAIAELDEEDEELIKSITFRNSGFYVKRIEDDDDD---DDEDLAP----------
HDKEEKTVAELDEEDEKLIKSITFRNSQDYVKRIEDDDDD---DEDLVIP----------
AEKDKE----LEEQDEAVIKSVIFQNSSKFVRRIDDDDLEDDGDEHYDEESSLNHAKS--
ADKEKR----IEEEDEALIKSIFSNKSEVPISRIRDEDIE---DEEELFQFSNGHGE---
SEKERK----LEEEDEALIKSLFQQRQTEVIRRISDEDSD---DDEDFN-----------
AEKVKR----IEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKG
EQKEKK----LEEEDEALIKSIVFHGSENFVRRIHDEDFD---DDDNDDVNPTSNGE---
ADKEKR----LEEEDEALIKSVVFHNSDGFVRRIRDEDIE---TEEELVQFSNGHGE---
ADKEKR----LEQEDEALIKSVVFHNSDGFVRRIRDEDIE---TEEQLDQFSNGHGE---
ADKEKR----LEQEDEALIKSVVFHNSDGFVRRIRDEDIE---TEEQLDQFSNGHGE---
------------------------------------------------------------
6: 182-182
estExt_Genewise1Plus.C_chr_37003 3 0 U2 GTAAGACC..ACAG
LOC_Os01g40610.1 3 0 U2 GTAAGATC..ACAG
e_gw1.294.23.1 3 0 U2 GTAGATCT..TCAG
estExt_Genewise1_v1.C_LG_XI3018 3 0 U2 GTACGAGT..ACAG
AT1G17130.1 3 0 U2 GTATGCTC..ACAG
Glyma13g33280.1 3 0 U2 GTATGATA..TCAG
Glyma15g39810.1 3 0 U2 GTATGATA..TCAG
Glyma15g39810.2 3 0 U2 GTATGATA..TCAG
7: 203-204
estExt_Genewise1Plus.C_chr_37003 4 0 U2 GTAATTCT..GCAG
LOC_Os01g40610.1 4 0 U2 GTAATCCT..GCAG
e_gw1.294.23.1 4 0 U2 GTACTTGT..ACAG
estExt_Genewise1_v1.C_LG_XI3018 4 0 U2 GTTAGTAC..AAAG
AT1G17130.1 4 0 U2 GTAAGTGT..GCAG
Glyma13g33280.1 4 0 GC GCAAGTAT..ACAG
Glyma15g39810.1 4 0 GC GCAAGTAT..ACAG
Glyma15g39810.2 4 0 GC GCAAGTAT..ACAG
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
KVSEFFSLLFCVDVYI--PTHQLG---YDDTKNAYESIYYGPCF--------CSSKKSWI
GQSSRTIKINESSESVTKPTDVLSKNNGSEVANKEGSKSWMPKF----IVKPKSASADSH
GQSSSTSKMNGSSQSVSNATDVLTKTSGSDNANKEGNKIWPSKM-PKFIVKPKSTPTDPI
MNGEGFVKVHLFELFLSRLWSNFG----------------------------RRVQL---
TSNDNPKRQKISEDLPRKATDTLTKASLDDSDKQEKLTAGRRKSN-------PLVTIAVI
MSSDKLKKRKVADEVSSKPTDSLAKASVSDSSNNRKIQVLQGLK--------MMANLNLD
SSSDLSKKRKATEVSPSNPTDILTSSSAENPKEPKKQAISKQPF--------KSVHIKVI
TSSDNFKRRKVAEELPSKPTDSLTKASSFDRPNKKENSGSSGQNDAKFIFKSSSVKVSVV
TSSSNPKGKRFQKIFQANQLTL--------------------------------------
TSSSNTKRQKISEDCPSKPTDTLTKASLDDSGKQENSRSGGKLN--------SLVRISVI
TSSSNT---KISEDCPSKPTDTLTKASLDDSGKQENSRSGGKLN--------SLVRISVI
------------------------------------------------------------
8: 245-249
LOC_Os01g40610.1 5 0 U2 GTACTTAG..GTAG
estExt_Genewise1_v1.C_LG_XI3018 5 0 U2 GTATGAGA..GCAG
AT1G17130.1 5 0 U2 GTTCCTCT..ACAG
Glyma13g33280.1 5 2 U2 GTTAAGAT..GCAG
Glyma15g39810.1 5 0 U2 GTAAGATG..GCAG
Glyma15g39810.2 5 0 U2 GTAAGATG..AAAG
9: 267-267
AT1G17130.1 6 1 U2 GTGGGTTT..CCAG
10: 273-274
LOC_Os01g40610.1 6 1 U2 GTAAAAAC..GCAG
estExt_Genewise1_v1.C_LG_XI3018 6 2 U2 CGGTACTT..AACA
Glyma15g39810.1 6 1 U2 GTATGTGC..GCAG
Glyma15g39810.2 6 1 U2 GTATGTGC..GCAG
Sb~estExt_Genewise1Plus.C_chr_37003
Zm~GRMZM2G086236_T01
Os~LOC_Os01g40610.1
Pp~e_gw1.294.23.1
Mt~AC157535_30.2
Pt~estExt_Genewise1_v1.C_LG_XI3018
At~AT1G17130.1
Vv~GSVIVP00010394001
Gm~Glyma13g33280.1
Gm~Glyma15g39810.1
Gm~Glyma15g39810.2
Lj~LjSGA_081380.1
WSWR---------------------------------------------
KRQKIES---TAVQDTGKGQDDEQKSEPAKQTNVLQSLCQNYDSDDSE-
KKQKTE----TTAGPDTGKAPVAEENSEPAQNNVLQSLCQNYDSDESE-
-------------------------------------------------
KKPGIS----NVRSAEEDKQKKKEEDNKTNTTWGTTISVSKLWK-----
PR-----------------------------------------------
KKQPQP----TSSSTPAPAKPEEKKSDGA-ANTSLASLFQNYGSDEDED
KRPVVASKGDNLAKLEERKQEEEKEPKNDGTSTGLQSLCQYYESDEDN-
-------------------------------------------------
KKPVTS----DVKSPAEPEQKKQEKDNETNTASGLLSLCQNYGSDDED-
KKPVTS----DVKSPAEPEQKKQEKDNETNTASGLLSLCQNYGSDDED-
-------------------------------------------------


3' UTR introns