SRGD Gene ID 641 BLASTp at NCBI n/a n/a  
OrganismsAt ,Vv ,Mt ,Os ,Gm ,Zm ,Pp ,Sb ,Pt
Gene count12
Cintron count17
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
MANRTDPTARSVHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHFGGT
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPTAKNIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
2: 0-0
AT2G40650.1 0 0 U2 ..
3: 42-42
e_gw1.28.128.1 0 1 U2 GTACCGCC..TCAG
AC150843_1.2 0 1 U2 GTTTGGAA..CTAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
YGGNRKATPFMCLTLKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLVGKPTDVYQYL
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTATVADVYQYL
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTATVADVYQYL
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTIADVYQYL
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTIADVYQYL
FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL
FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEYKYVRILGAFYLRLTGIDTDVYQYL
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGTDIDVYRYL
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGSDTDVYHYL
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGSDTDVYHYL
YGGNRKPTPFMCLVMKMLQIQPEKEIIIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL
4: 95-95
e_gw1.28.128.1 1 2 U2 GTAAGCTT..GCAG
LOC_Os09g01630.1 0 2 U2 GTCACTAC..GCAG
LOC_Os09g01630.2 0 2 U2 GTCACTAC..GCAG
Sb02g012970 0 2 U2 GTACGCTT..GTAG
GSVIVP00022667001 0 2 U2 GTATGTAG..GCAG
gw1.XIII.692.1 0 2 U2 GTAAGTGA..GTAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
EPLYNDYRKLRRRTSEGGYILARVDEFIDELLTTEYSCDIALPRVPKRWTLETTGLLDQR
EPLYNDYRKIRHKLSDGKFTLTHVDEFIDDLLTKDYSCDTALPRIQKRWVLETSGTLEPR
EPLYNDYRKIRHKLSDGKFTLTHVDEFIDDLLTKDYSCDTALPRIQKRWVLETSGTLEPR
EPLYNDYRKIRHKLSDGQFTLTHVDEFIDELLTKDYSCDTAMPRIQKRWVLEASGTLEPR
EPLYNDYRKIRHKLSDGQFTLTHVDEFIDELLTKDYSCDTALPRIQKRWVLEASGTLEPR
EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR
EPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDYSCDVALPRIKKRWTLESLGTLEPR
EPLYNDYRKLRKKLTDGKFALTHMDEVIDELLTKDYSCDIAMPRIKKRWTLETLAALEPR
EPLYNDYRKLRRKLPDGQFALTHVDEVIDELLTTDYSCDIAMPRIKKRWTLESLGALEPR
EPLYNDYRKLRRKLPDGQFALTHVDEVIDELLTTDYSCDIAMPRIKKRWTLESLGALEPR
EPLYNDYRKLRRKLADGQFALTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESLGSLEPR
EPLYNDYRKLRRKLADGQFTLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLGSLEPR
5: 136-136
e_gw1.28.128.1 2 1 U2 GTAAGTAG..TAAG
LOC_Os09g01630.1 1 1 U2 GTATGCAC..TCAG
LOC_Os09g01630.2 1 1 U2 GTATGCAC..TCAG
Sb02g012970 1 1 U2 GTATGCTC..TCAG
GSVIVP00022667001 1 1 U2 GTAAGACT..TCAG
gw1.XIII.692.1 1 1 U2 GTAAGCTC..TCAG
Glyma10g29080.1 0 1 U2 GTTGGTTT..GCAG
Glyma20g38250.1 0 1 U2 GTGAGTTT..GCAG
6: 166-166
e_gw1.28.128.1 3 2 U2 GTATGTAT..TCAG
LOC_Os09g01630.1 2 2 U2 GTCTCTTT..ACAG
LOC_Os09g01630.2 2 2 U2 GTCTCTTT..ACAG
Sb02g012970 2 2 U2 GTTTGTTT..ATAG
GSVIVP00022667001 2 2 U2 GTGATTCT..ACAG
gw1.XIII.692.1 2 2 U2 GTAACTTT..TCAG
Glyma10g29080.1 1 2 U2 GTATATTT..ATAG
Glyma20g38250.1 1 2 U2 GTATATTT..ATAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
RSALEDDFEEEEEKEEEEAAANGLE----AMDEHRRSRSPVKERERDEEQGRDRHRD-YR
RSALEDDFEEEEEDKEDEQPMDIDEPNGREKHDHYRGRSPTRD------RDRERKHERH-
RSALEDDFEEEEEDKEDEQPMDIDEPNGREKHDHYRGRSPTRD------RDRERKHERH-
RSALEDDFEEEEEDKE-EQPMEIDEPNGRENDNH-RGRSLARERDRD--WDHDRKHERH-
RSALEDDFEEEEEDKE-EQPMEIDEPNGHENDNH-RGRSPARERDRDRDRDRDRKPERH-
KSVLEDDFEEEEEKEENEGIADGSED---EMDQ--RRKSPERERE----RDRDRRRDSHR
RSALEDDFEEEEEKEEDDQLMDELDVGAHEKDYY-RGRSPARE------RDRDRKRDSHR
KSVLEDDFEEEEEREENEQ-LEGL------------------D------NGADERRD---
QSALEEDFEEEEENEDNEQPAEEP-----EKDYN-RGRSPARE------RDRDRRRDSHR
QSALEEDFEEEEENEDNEQPAEEP-----EKDYN-RGRSPARE------RDRDRRRDSHR
RSALEEDFEEEEEKEDNDQPVDEIEDRAYEKDQY-RGRSPTRE------RDRDKRRDSHR
RSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHY-RGRSPTRE------RDRDRRHDSHR
7: 210-211
e_gw1.28.128.1 4 0 U2 GTTGACAA..GCAG
LOC_Os09g01630.1 3 0 U2 GTAAACAT..TTAG
LOC_Os09g01630.2 3 0 U2 GTAAACAT..TTAG
Sb02g012970 3 0 U2 GTGAGCAC..TCAG
GSVIVP00022667001 3 0 U2 GTTTACAT..ACAG
Glyma10g29080.1 2 0 U2 GTGCTTCC..GCAG
Glyma20g38250.1 2 0 U2 GTGCTTCC..GCAG
8: 234-234
gw1.XIII.692.1 3 0 U2 GTATCCTT..AGAG
9: 238-240
e_gw1.28.128.1 5 2 U2 GTATGTGA..ACAG
LOC_Os09g01630.1 4 2 U2 GTATGCTA..CCAG
LOC_Os09g01630.2 4 2 U2 GTATGCTA..CAAG
Sb02g012970 4 2 U2 GTATGCTC..ACAG
GSVIVP00022667001 4 2 U2 GTAAAACA..TCAG
Glyma10g29080.1 3 2 U2 GTATTGTT..ATAG
Glyma20g38250.1 3 2 U2 GTACTGTT..ATAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
GRDRDYDRDYDRGRDRDRERERERGRD------RHRDRDPDRDYHR-----DYHR---RD
HRDRDYDRDRDYGRGRERDRDRDRERDRDRD--RDRDRDRDRDRHRIRDE-DYSRDRDRA
HR----------------------------------------------------------
NRDKDYDRDRDYDRDYGRGRERHRDRDRE----RDRNRDRDRDRHRLRDD-DYNRNRDRD
HRDRDYDRDRDYDRDYGRGRERDRDRDRE----RDRNRDRDRDRHRLRDD-DYNRDRDRD
HRDRDYDRDYDMDRDHDRDYERERGHG------RDRDRERDRDHYR-----------ERD
YRDRDYDRERGRGRERDRERERDRDSYRD----RERERDRDRDRYRLRDDKEYGRDRERE
-------------------------------------RDRDRDRYRLRDERDYGHDRERE
HRDRDYDREYDRDYDRERGRGRDRDRDRDREKERDRDRERDRDRYRLREEKDYG------
HRDRDYDREYDRDYDRERGRGRDRDRDRDREKERDRDRERDRDRYRLREEKDYG------
HRDRDYDRDYDRDYDRERGRGRD----------RDRDRDRDRDRYRLREEKDYG------
HRDRDYDRDYDRDYDRERGRGRDRD--------RDRERDRDRDRYRLREEKDYG------
10: 283-283
e_gw1.28.128.1 6 1 U2 GTTATCGT..AGAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
RDRDRGRDRDRE-RYGDRDRRRSRSRSRSRERRD--------RERDQK------------
RDRD-GRERERW--DRDRGRRRSRSRSRSRDRRERDREDGEYRRRRDRGSASPRGHAEDG
------------------------------------------------------------
RERD-GRERERR--DRDRGRHRSRSRSRD--RRDRDREDGEYRRRRGRGSVSPRGRGEDG
RERD-GRERERR--DRDRGRHRSRSRSRD--RRDRDREDGEYRRRRGRGSASPRGRGEDG
RDRERGRDRERD--RRDRARRRSRSRSRD-------------RKRHETD---------DV
RERE-GRERERR--DRDRAIQGAEVGA---------------RIRHARSSTNMPE---DG
RERE-GRERERR--DRDRGRRRSHSRSRSRSRD---------RKRHAHSS-SPKRRG-DG
RERE-GRERERRDRDRDRGRRRSYSRSRSRSRDRKDHDGGDYRKRHARSSVSPRR---DG
RERE-GRERERRDRDRDRGRRRSYSRSRSRSRDRKDHDGGDYRKRHARSSVSPRR---DG
RERE-GRERERREKDRDRGRRRSHSRSRSRSRDHREHDGGDYRKRHARSSVSPRRHG-DG
RDRE-GRERERREKDRDRGRRRSHSRSRSRSRDRREHDGGDYRKRHARSSVSPRRHG-DG
11: 316-316
GSVIVP00022667001 5 1 U2 GTGGCAGG..GGAG
12: 343-345
e_gw1.28.128.1 7 1 U2 GTGATGCC..AAAG
GSVIVP00022667001 6 0 U2 GTAAGGAT..CAAG
13: 350-350
GSVIVP00022667001 7 1 U2 GTCCTAGA..GGAG
Pp~e_gw1.28.128.1
Os~LOC_Os09g01630.1
Os~LOC_Os09g01630.2
Zm~GRMZM2G042807_T01
Sb~Sb02g012970
At~AT2G40650.1
Vv~GSVIVP00022667001
Pt~gw1.XIII.692.1
Mt~AC147963_34.2
Mt~AC150843_1.2
Gm~Glyma10g29080.1
Gm~Glyma20g38250.1
-----------KKEEKK-QPVTDGTDHPDPEIAEANRIRAALGLKPLRP
GSRDEPKK---RKEKKEKKGEGNAPDPNDPEIIEMNKLRASLGLKPLK-
----------------------------------------AIGRSAAS-
GPREEPKR---KKEKKE-KGEGNAPDPNDPEIIEMNKLRASLGLKPLK-
GPREEPKR---KKEKKEKKGEGNAPDPNDPEIIEMNKLRASLGLKPLK-
RDREEPKK---KKEKKE-KMKEDGTDHPNPEIAEMNRLRASLGMKPLRD
TTREEPRK---KKEKKE-K-KDDGTDHPDPEIAEANRLRASLGLKPLKL
AE--EPKKKK-KKEKKE-R-K----------------------------
AEDGEPKKKKEKKEKKE-K-KDDGTDHPDPEIAEANRIRASLGLKPLKM
AEDGEPKKKKEKKEKKE-K-KDDGTDHPDPEIAEANRIRASLGLKPLKM
LEDGEPKKKK-KKEKKE-K-KDDGTDHPDPEIAEANKLRAALGLKPLRV
LEDGEPKKKK-KKEKKE-K-KDDGTDHPDPEIAEANKLRAALGLKPLRV


3' UTR introns