SRGD	Gene ID 639	BLASTp at NCBI	n/a	n/a		Organisms Os ,At ,Gm ,Sb ,Vv ,Zm ,Pp ,Lj ,Pt Gene count 12 Cintron count 11 Cintron classes U2 ,em ,im ,absent ,GC
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------MAEAEDQQN ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ MTHCSVWIPTVTPKPSIFLPDHKDQAPQKIIVLTESVKWSSAINTLLDIGSRCKSTYLFE ------------------------------------------------------------	2: 51-51 AT3G04610.1 0 0 U2 ..
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	------------------------------------------------------------ ------------------------------------------------------------ FVAHNGDQVPDQGSDELHNGLPYQVHDETLVHQPYEVEDPILEPQQYEVPDPTLEPQQYE ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------------MDGLVENFDA --------------------------------------------------MDGLVENFDA SGVRCGLHERSSSTPRTRISRSDPQARLSLRRQFLAGVLPASPFIPSSELMDGQVETFVG --------------------------------------------------MDEQVENFVG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	------------------------------------------------------------ ------------------------------------------------------------ VPDQTLEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQA ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ DDLGEMPQNHYNEEQLIPYSDVSH--------PYNEEPDNMDNVEEGNPYI---QQVSLY DDLGEMPQNHYNEEQLIPYSDVSH--------PYNEEPDNMDNVEEGNPYI---QQVSLY DEEGGSPQVPYDGEQPTLYDSVAKQYSEELGDQYNEQPRAQYDEGSGNPYNDYEEQANLY HDKGGLAQVPYDGEQPNPYDDVAKQYSEELGDQYNEQPGAQYDEGSANPYN--EEQANVY
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	------------------------------DG----------------EKKWAGWPGDNV -------------------------------------------------KKWAGWPGDNV QYQAQGDVQDHNGDEVQDKVEDEEGIPEHLESLQKSEPEEDATVGG-EEKRWPGWPGETV ------------------------------------------------------------ ----MAEMDQNTGGEHEAEETIE------IEA--EVHGGEEAVVA---EKKWPGWPGESV ----MAEVDQYTGGEHEVEETIE------VEAEEEMHGGEEAVVVA--EKKWPGWPGESV ----MAEVEENFGEPDMDQLPED------SQPQQKRGRDDDSAIGG-GEKRWPGWPGESV ------------------------------------------------------------ SEEPENQYNEEPSNPYQEESDNA------YNG--EVKQQDSLPVEA--DKKWPGWPGESV SEEPENQYNEEPSNPYQEESDNA------YNG--EVKQQDSLPVEA--DKKWPGWPGESV SEETGNRYNEDPADSYQEEQENA------FSG--GINQQDNLQVNNVDDNKWPGWPGESV NEETGNQYNEDPTNSYQEELENA------FSGDPDMAQKDNSQVNNVDDDKWPGWPGESV
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP ---------------------------------------------VMVSAKEEPDSSLPP FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP --MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPP FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP	3: 284-284 gw1.150.78.1 0 0 U2 GTAAGCTC..GTAG Glyma03g40840.1 1 0 U2 GTAAGTTT..TTAG Glyma19g43540.1 1 0 U2 GTAAGTTT..TTAG estExt_Genewise1_v1.C_LG_XIII1582 0 0 U2 GTAAGTTT..ATAG LOC_Os03g42900.1 1 0 U2 GTAAGTTC..TAAG LOC_Os03g42900.2 1 0 U2 GTAAGTTC..TAAG Sb01g014200 1 0 U2 GTAAGTGC..GAAG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS SMDGLLRVHMRIVDGLDGEASQAPP--PSK-VSTRLLVPASQAGSLIGKQGGTVKAIQEA AIDGLLRVHKRVIDGLENDSTHASSGVVAK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA AVDGLLRIHKRIIDGLESDFTHAPSGVAGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA AVDGLLRVHKRIIDGLESDFTHAPSGVAGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA AMDGLLKVHKRIVDGLEGDSSHMPP--GGK-VSTRLLVAASQAGSLIGKQGGTVKSIQEA AMDGLLRVHKRIIDGLDSDSSNTPPTSGAK-VSTRLLVPASQAGSLIGKQGGTVKSIQEA AMDGLFRVYKRITDGSDGDSGQPERNISNV-GPTRLLVPASQAGSLIGKQGATIKSIQDS AMDGLFRVYKRITDGSDGDSGQPERNISNV-GPTRLLVPASQAGSLIGKQGATIKSIQDS AMDGLLRVHKRITDSSDGESSQPQRSAGNI-GPTRLLVPSSQAGSLIGKQGATIKSIQDS AVDGLLRVHKRITDSSNGESGQLQRSAGNI-GPTRLLVPSSQAGSLIGKQGATIKSIQDS
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	SGANVRVLP-AEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPLFEL SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLPLFEL SACIVRVLG-SEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFEN SNCIVRVLG-AEDLPSFALQDDRVVEVLGDPTGVHKAVELIVSHLRKFLVDRGVIPIFEM SNCIVRVLG-AEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDRGVIPIFEM SNCIVRVLG-AEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRGVIPIFEM SNCIVRVLG-AEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEM STCIVRVLG-AEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEM SKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEG SKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEG SKSIVRIV---ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEA SKSVVRIV---ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFET	4: 367-370 gw1.150.78.1 1 1 U2 GTTAGTGG..GCAG chr1.CM0600.370.nd 0 1 U2 GTTCATGC..GCAG Glyma03g40840.1 2 1 U2 GTTCTTGC..GCAG Glyma19g43540.1 2 1 U2 GTTCTTGC..GCAG estExt_Genewise1_v1.C_LG_XIII1582 1 1 U2 GTTTTTCC..GCAG LOC_Os03g42900.1 2 1 U2 GTAAGGTT..TCAG LOC_Os03g42900.2 2 1 U2 GTAAGGTT..TCAG Sb01g014200 2 1 U2 GTAAGTTT..TCAG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	NV-MANQNNQQSTGSQ--WQQPSSTQQQQPPSYSSNDSTYYGGADISH----------HS NRAVANQSNQQSTASQ--WQQPSSTQQQQPPNYSSNDSSYYGAAELPH----------HS QMQKPTRQMDHMPPPHQSWGPPQ--GH--APS--VGGG-GYGHNPPPYMQPPPRHDSYYP NMQTANSHHVEHMPPHQSWGPPQ--GL--PPN--AGGGPGFGPPPPQYMPPPRQHDNYYP NMQTANPHHAEHMPPHQSWGPSQ--GL--PPN--VGGGPGFG-PPSQYMPPPRQLDSYYP NMQTANTHHAEHMPPHQSWGPPQ--GL--PPN--VGGGSGFG-PPSQYMPPPRQLDSYYP QMQMSNPP-IEHMPPHQPWGPPQ--GL--PPN--ASGGPGFG-PNPPYMPPPRQLDSYYP QMQMSNPSMEQ-MPPHQSWGPPQ--PL--PPN--HGGGPGYG-QNPQYMPPPRQLDNYYP QMKMHNAQREQAMAAPQPWGPPQPWGP--PPSHLPPGGPGYG-GHPQFMPPRPQ-DNYYP QMKMHNAQREQAMAAPQPWGPPQPWGP--PPSHLPPGGPGYG-GHPQFMPPRPQ-DNYYP HMKMHGMPREQPVPPPQHWGPPQTWIR--PPN-IPPGGPGFG-GNPQFMHPRPQ-DSYYP HMKMHGMPREQPVPPPQHWGPPQTWGP--PPN-IPPGGPGFG-GNPQFIPPRPQ-DSYYP	5: 420-421 gw1.150.78.1 2 1 U2 GTTATCAT..GCAG chr1.CM0600.370.nd 1 0 U2 GTAAGTGT..CCAG Glyma03g40840.1 3 0 U2 GTAAGTGT..TCAG Glyma19g43540.1 3 0 U2 GTAAGTGT..CCAG estExt_Genewise1_v1.C_LG_XIII1582 2 0 U2 GTAAGCTG..CAAG LOC_Os03g42900.1 3 0 U2 GTAAGTTA..ACAG LOC_Os03g42900.2 3 0 U2 GTAAGTTA..ACAG Sb01g014200 3 0 U2 GTAAGTTT..GCAG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	QTQQQSHDLANQHHHGVSMYGRDPTLGGSIAP--PPPAPVITQVTQHMQIPLSYADAIIG QPQQQSHDLANH-HHGLSLYGRDPTLGGTIVP--PTPAPVITQVTQHMQIPLSYADAIIG PPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIG PAEM-PPPVDRQPHYGISAYGRDASVGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG SAEM-PPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG PAEM-PPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG PPEL-PPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIG PADM-PPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIG PPDV--PSMEKQPHYGISAYGREAPTGVSASGN-QPPSHVASQVTHNMQIPLSYADAVIG PPDV--PSMEKQPHYGISAYGREAPTGVSASGN-QPPSHVASQVSFCCTLS--------- SPDV--PHMEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIG TPDA--PAMEKQPHYGISAYGREAPPSGASATGNQPLSHAGSQVTHNMHIPLNYADAVIG	6: 522-522 gw1.150.78.1 3 0 U2 GTATTTTG..GCAG chr1.CM0600.370.nd 2 0 U2 GTACTTGT..GCAG Glyma03g40840.1 4 0 U2 GTACTTGT..GCAG Glyma19g43540.1 4 0 U2 GTACTTGT..GCAG estExt_Genewise1_v1.C_LG_XIII1582 3 0 U2 GTTCTTTT..GCAG LOC_Os03g42900.1 4 0 U2 GTCAGTTT..AAAG Sb01g014200 4 0 U2 GTAAGTTC..AAAG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	SAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQNFMTGASSGP-- GAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ------------ TSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPA-- TAGASISYIRRASGATVAIQETRGVPGEMTVEISGTAAQVQTAQQLIQNFMAEA------ TAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAA TAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAA TAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQAL---------- TAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFMAEAGA---- AAGASISYIRRHSGATVTIQESRGAPGEMTVEIIGSASQVQTAQQLVQNFMAEAPQGP-- ------------------------------------------------------------ AAGASISYIRRHSGATVTIQESRGAPGEMTVEITGTAAQVQTAQQLIQNFMAEAAPPPPG AAGASISYIRRHSGATVTI-----------------------------------------	7: 587-587 gw1.150.78.1 4 0 U2 GTATGATG..GCAG chr1.CM0600.370.nd 3 0 U2 GTAATTCT..GCAG Glyma03g40840.1 5 0 U2 GTAATACT..GCAG Glyma19g43540.1 5 0 U2 GTAATTCT..GCAG estExt_Genewise1_v1.C_LG_XIII1582 4 0 GC GCAATATT..GCAG LOC_Os03g42900.1 5 0 U2 GTATATTT..GCAG
Pp~gw1.150.78.1 Pp~gw1.51.212.1 At~AT3G04610.1 Lj~chr1.CM0600.370.nd Gm~Glyma03g40840.1 Gm~Glyma19g43540.1 Vv~GSVIVP00002157001 Pt~estExt_Genewise1_v1.C_LG_XIII1582 Os~LOC_Os03g42900.1 Os~LOC_Os03g42900.2 Zm~GRMZM2G417223_T01 Sb~Sb01g014200	P-PYTSTYSSTVDTNYSSYP------------------------------------ ---------------------------------------------VKCRLWRDRGR --PAQPQTVAPEQQGYNPYA----THGSVYAAAPTNPP-----GGYATDYSSGYGY -------------------------------------------------------- P-AQPQTTVPAADQGYNSYP----AHGSVYASPPSNP---GHAGGYGSVYGANYGY P-AQPQTTVPAADQGYNSYP----AHGSLYASPPSNP---GHAGGYSSVYGANYGY ---------------FLPV-----FDTKLLVCLC---------------------- --PAQPQTGGAADQGYNPY-----SHSSVYASPPSNPEHTGHAGGYGSMYGANYGY PPPASNPPAPAVDLSYGSYPPP--YGASYGSAASGAGPAPHNGGSYGGTTYPSYGY -------------------------------------------------------- PAPASNPPAPPVDPSYGSYPPPYGAAPSYGSSAAAGPPQYNGGNYGGPTYPPSYGY --------------------------------------------------------
		3' UTR introns