SRGD Gene ID 639 BLASTp at NCBI n/a n/a  
OrganismsOs ,At ,Gm ,Sb ,Vv ,Zm ,Pp ,Lj ,Pt
Gene count12
Cintron count11
Cintron classesU2 ,em ,im ,absent ,GC
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
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---------------------------------------------------MAEAEDQQN
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MTHCSVWIPTVTPKPSIFLPDHKDQAPQKIIVLTESVKWSSAINTLLDIGSRCKSTYLFE
------------------------------------------------------------
2: 51-51
AT3G04610.1 0 0 U2 ..
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
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FVAHNGDQVPDQGSDELHNGLPYQVHDETLVHQPYEVEDPILEPQQYEVPDPTLEPQQYE
------------------------------------------------------------
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--------------------------------------------------MDGLVENFDA
--------------------------------------------------MDGLVENFDA
SGVRCGLHERSSSTPRTRISRSDPQARLSLRRQFLAGVLPASPFIPSSELMDGQVETFVG
--------------------------------------------------MDEQVENFVG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
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VPDQTLEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQA
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DDLGEMPQNHYNEEQLIPYSDVSH--------PYNEEPDNMDNVEEGNPYI---QQVSLY
DDLGEMPQNHYNEEQLIPYSDVSH--------PYNEEPDNMDNVEEGNPYI---QQVSLY
DEEGGSPQVPYDGEQPTLYDSVAKQYSEELGDQYNEQPRAQYDEGSGNPYNDYEEQANLY
HDKGGLAQVPYDGEQPNPYDDVAKQYSEELGDQYNEQPGAQYDEGSANPYN--EEQANVY
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
------------------------------DG----------------EKKWAGWPGDNV
-------------------------------------------------KKWAGWPGDNV
QYQAQGDVQDHNGDEVQDKVEDEEGIPEHLESLQKSEPEEDATVGG-EEKRWPGWPGETV
------------------------------------------------------------
----MAEMDQNTGGEHEAEETIE------IEA--EVHGGEEAVVA---EKKWPGWPGESV
----MAEVDQYTGGEHEVEETIE------VEAEEEMHGGEEAVVVA--EKKWPGWPGESV
----MAEVEENFGEPDMDQLPED------SQPQQKRGRDDDSAIGG-GEKRWPGWPGESV
------------------------------------------------------------
SEEPENQYNEEPSNPYQEESDNA------YNG--EVKQQDSLPVEA--DKKWPGWPGESV
SEEPENQYNEEPSNPYQEESDNA------YNG--EVKQQDSLPVEA--DKKWPGWPGESV
SEETGNRYNEDPADSYQEEQENA------FSG--GINQQDNLQVNNVDDNKWPGWPGESV
NEETGNQYNEDPTNSYQEELENA------FSGDPDMAQKDNSQVNNVDDDKWPGWPGESV
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP
FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP
FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP
---------------------------------------------VMVSAKEEPDSSLPP
FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP
FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP
FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP
--MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPP
FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP
FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP
FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP
FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP
3: 284-284
gw1.150.78.1 0 0 U2 GTAAGCTC..GTAG
Glyma03g40840.1 1 0 U2 GTAAGTTT..TTAG
Glyma19g43540.1 1 0 U2 GTAAGTTT..TTAG
estExt_Genewise1_v1.C_LG_XIII1582 0 0 U2 GTAAGTTT..ATAG
LOC_Os03g42900.1 1 0 U2 GTAAGTTC..TAAG
LOC_Os03g42900.2 1 0 U2 GTAAGTTC..TAAG
Sb01g014200 1 0 U2 GTAAGTGC..GAAG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT
AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS
SMDGLLRVHMRIVDGLDGEASQAPP--PSK-VSTRLLVPASQAGSLIGKQGGTVKAIQEA
AIDGLLRVHKRVIDGLENDSTHASSGVVAK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA
AVDGLLRIHKRIIDGLESDFTHAPSGVAGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA
AVDGLLRVHKRIIDGLESDFTHAPSGVAGK-VSTKLLVPASQAGSLIGKQGGTVKSIQEA
AMDGLLKVHKRIVDGLEGDSSHMPP--GGK-VSTRLLVAASQAGSLIGKQGGTVKSIQEA
AMDGLLRVHKRIIDGLDSDSSNTPPTSGAK-VSTRLLVPASQAGSLIGKQGGTVKSIQEA
AMDGLFRVYKRITDGSDGDSGQPERNISNV-GPTRLLVPASQAGSLIGKQGATIKSIQDS
AMDGLFRVYKRITDGSDGDSGQPERNISNV-GPTRLLVPASQAGSLIGKQGATIKSIQDS
AMDGLLRVHKRITDSSDGESSQPQRSAGNI-GPTRLLVPSSQAGSLIGKQGATIKSIQDS
AVDGLLRVHKRITDSSNGESGQLQRSAGNI-GPTRLLVPSSQAGSLIGKQGATIKSIQDS
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
SGANVRVLP-AEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPLFEL
SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLPLFEL
SACIVRVLG-SEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFEN
SNCIVRVLG-AEDLPSFALQDDRVVEVLGDPTGVHKAVELIVSHLRKFLVDRGVIPIFEM
SNCIVRVLG-AEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDRGVIPIFEM
SNCIVRVLG-AEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRGVIPIFEM
SNCIVRVLG-AEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEM
STCIVRVLG-AEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEM
SKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEG
SKSIVRIV---ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFEG
SKSIVRIV---ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEA
SKSVVRIV---ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFET
4: 367-370
gw1.150.78.1 1 1 U2 GTTAGTGG..GCAG
chr1.CM0600.370.nd 0 1 U2 GTTCATGC..GCAG
Glyma03g40840.1 2 1 U2 GTTCTTGC..GCAG
Glyma19g43540.1 2 1 U2 GTTCTTGC..GCAG
estExt_Genewise1_v1.C_LG_XIII1582 1 1 U2 GTTTTTCC..GCAG
LOC_Os03g42900.1 2 1 U2 GTAAGGTT..TCAG
LOC_Os03g42900.2 2 1 U2 GTAAGGTT..TCAG
Sb01g014200 2 1 U2 GTAAGTTT..TCAG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
NV-MANQNNQQSTGSQ--WQQPSSTQQQQPPSYSSNDSTYYGGADISH----------HS
NRAVANQSNQQSTASQ--WQQPSSTQQQQPPNYSSNDSSYYGAAELPH----------HS
QMQKPTRQMDHMPPPHQSWGPPQ--GH--APS--VGGG-GYGHNPPPYMQPPPRHDSYYP
NMQTANSHHVEHMPPHQSWGPPQ--GL--PPN--AGGGPGFGPPPPQYMPPPRQHDNYYP
NMQTANPHHAEHMPPHQSWGPSQ--GL--PPN--VGGGPGFG-PPSQYMPPPRQLDSYYP
NMQTANTHHAEHMPPHQSWGPPQ--GL--PPN--VGGGSGFG-PPSQYMPPPRQLDSYYP
QMQMSNPP-IEHMPPHQPWGPPQ--GL--PPN--ASGGPGFG-PNPPYMPPPRQLDSYYP
QMQMSNPSMEQ-MPPHQSWGPPQ--PL--PPN--HGGGPGYG-QNPQYMPPPRQLDNYYP
QMKMHNAQREQAMAAPQPWGPPQPWGP--PPSHLPPGGPGYG-GHPQFMPPRPQ-DNYYP
QMKMHNAQREQAMAAPQPWGPPQPWGP--PPSHLPPGGPGYG-GHPQFMPPRPQ-DNYYP
HMKMHGMPREQPVPPPQHWGPPQTWIR--PPN-IPPGGPGFG-GNPQFMHPRPQ-DSYYP
HMKMHGMPREQPVPPPQHWGPPQTWGP--PPN-IPPGGPGFG-GNPQFIPPRPQ-DSYYP
5: 420-421
gw1.150.78.1 2 1 U2 GTTATCAT..GCAG
chr1.CM0600.370.nd 1 0 U2 GTAAGTGT..CCAG
Glyma03g40840.1 3 0 U2 GTAAGTGT..TCAG
Glyma19g43540.1 3 0 U2 GTAAGTGT..CCAG
estExt_Genewise1_v1.C_LG_XIII1582 2 0 U2 GTAAGCTG..CAAG
LOC_Os03g42900.1 3 0 U2 GTAAGTTA..ACAG
LOC_Os03g42900.2 3 0 U2 GTAAGTTA..ACAG
Sb01g014200 3 0 U2 GTAAGTTT..GCAG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
QTQQQSHDLANQHHHGVSMYGRDPTLGGSIAP--PPPAPVITQVTQHMQIPLSYADAIIG
QPQQQSHDLANH-HHGLSLYGRDPTLGGTIVP--PTPAPVITQVTQHMQIPLSYADAIIG
PPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIG
PAEM-PPPVDRQPHYGISAYGRDASVGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG
SAEM-PPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG
PAEM-PPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLSYADAVIG
PPEL-PPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIG
PADM-PPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIG
PPDV--PSMEKQPHYGISAYGREAPTGVSASGN-QPPSHVASQVTHNMQIPLSYADAVIG
PPDV--PSMEKQPHYGISAYGREAPTGVSASGN-QPPSHVASQVSFCCTLS---------
SPDV--PHMEKQPHYGISAYGREAPPSGASATGNQPPSHAGSQVAHDMHIPLAYADAVIG
TPDA--PAMEKQPHYGISAYGREAPPSGASATGNQPLSHAGSQVTHNMHIPLNYADAVIG
6: 522-522
gw1.150.78.1 3 0 U2 GTATTTTG..GCAG
chr1.CM0600.370.nd 2 0 U2 GTACTTGT..GCAG
Glyma03g40840.1 4 0 U2 GTACTTGT..GCAG
Glyma19g43540.1 4 0 U2 GTACTTGT..GCAG
estExt_Genewise1_v1.C_LG_XIII1582 3 0 U2 GTTCTTTT..GCAG
LOC_Os03g42900.1 4 0 U2 GTCAGTTT..AAAG
Sb01g014200 4 0 U2 GTAAGTTC..AAAG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
SAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQNFMTGASSGP--
GAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ------------
TSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAPA--
TAGASISYIRRASGATVAIQETRGVPGEMTVEISGTAAQVQTAQQLIQNFMAEA------
TAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAA
TAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAA
TAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQAL----------
TAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLIQNFMAEAGA----
AAGASISYIRRHSGATVTIQESRGAPGEMTVEIIGSASQVQTAQQLVQNFMAEAPQGP--
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AAGASISYIRRHSGATVTIQESRGAPGEMTVEITGTAAQVQTAQQLIQNFMAEAAPPPPG
AAGASISYIRRHSGATVTI-----------------------------------------
7: 587-587
gw1.150.78.1 4 0 U2 GTATGATG..GCAG
chr1.CM0600.370.nd 3 0 U2 GTAATTCT..GCAG
Glyma03g40840.1 5 0 U2 GTAATACT..GCAG
Glyma19g43540.1 5 0 U2 GTAATTCT..GCAG
estExt_Genewise1_v1.C_LG_XIII1582 4 0 GC GCAATATT..GCAG
LOC_Os03g42900.1 5 0 U2 GTATATTT..GCAG
Pp~gw1.150.78.1
Pp~gw1.51.212.1
At~AT3G04610.1
Lj~chr1.CM0600.370.nd
Gm~Glyma03g40840.1
Gm~Glyma19g43540.1
Vv~GSVIVP00002157001
Pt~estExt_Genewise1_v1.C_LG_XIII1582
Os~LOC_Os03g42900.1
Os~LOC_Os03g42900.2
Zm~GRMZM2G417223_T01
Sb~Sb01g014200
P-PYTSTYSSTVDTNYSSYP------------------------------------
---------------------------------------------VKCRLWRDRGR
--PAQPQTVAPEQQGYNPYA----THGSVYAAAPTNPP-----GGYATDYSSGYGY
--------------------------------------------------------
P-AQPQTTVPAADQGYNSYP----AHGSVYASPPSNP---GHAGGYGSVYGANYGY
P-AQPQTTVPAADQGYNSYP----AHGSLYASPPSNP---GHAGGYSSVYGANYGY
---------------FLPV-----FDTKLLVCLC----------------------
--PAQPQTGGAADQGYNPY-----SHSSVYASPPSNPEHTGHAGGYGSMYGANYGY
PPPASNPPAPAVDLSYGSYPPP--YGASYGSAASGAGPAPHNGGSYGGTTYPSYGY
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PAPASNPPAPPVDPSYGSYPPPYGAAPSYGSSAAAGPPQYNGGNYGGPTYPPSYGY
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3' UTR introns