SRGD Gene ID 636 BLASTp at NCBI n/a n/a  
OrganismsMt ,Vv ,Os ,Gm ,Zm ,Pp ,Sb ,Pt ,At
Gene count12
Cintron count18
Cintron classesU2 ,im ,em ,absent ,GC
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Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
MMQSPAGAGPPHGQQAEGQQQQPQQWVMMQQSGMQPQHHEEVKTLWVGDLQYWMDENYLH
-----------------------------------PQSHEEVKTLWVGDLQYWMDENYLH
-----------------------------------PQSHEEVKTLWVGDLQYWMDENYLH
-------------------MAMMHPPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLT
---------------------------MAAAPYHQPTSLEEVRTLWIGDLQYWADENYLY
----------------------------MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLY
----------------------------MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLY
----------------------------MATTYHQPASLEEVRTLWIGDLQYWVDENYLT
-----------------------------MASYQQASTIEEVRTLWIGDLQYWVDEGYLS
-----------------------------MASYQQASTIEEVRTLWIGDLQYWVDEGYLS
--MEAQAHQQQQWMHPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLH
---------------------------------------EEVRTLWIGDLQYWADESYLT
1: 28-28
AC146330_10.2 0 0 U2 ..
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKILQAYNGTQMPNTEQPFRLNW
TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQAYNGTQMPNTEQPFRLNW
TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQAYNGTQMPNTEQPFRLNW
SCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNW
NCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQTYNGTQMPGTEHTFRLNW
SCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQTYNGTQMPGTEHTFRLNW
SCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQTYNGTQMPGTEHTFRLNW
HCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNW
HCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNW
HCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNW
SCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNW
SCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNW
2: 67-67
estExt_Genewise1.C_3910068 0 0 U2 GTACTTGT..GCAG
AT5G19350.1 0 0 U2 GTATCTCT..GCAG
LOC_Os03g07800.1 0 0 U2 GTAGGTTT..GCAG
estExt_Genewise1.C_chr_111293 0 0 U2 GTAGGCGA..GCAG
GSVIVP00024620001 0 0 U2 GTCCTCTC..GTAG
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY
ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY
ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY
ASFGSGQ-KVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGY
ASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGY
ASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGY
ASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGY
ASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGY
ASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGY
ASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGY
ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGY
ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGY
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
GFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGPNQ-LNPK---VSPVAVATY
GFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQ-LNPKVDAVSPVAVATY
GFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQ-LNPKVDAVSPVAVATY
GFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQ-QYVT--------KAVY
GFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQL-QYGA-------AKAMY
GFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQL-QYSA-------AKAVY
GFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQL-QYSA-------AKAVY
GFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIY
GFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTG----AYAA--PAAPVPKPVY
GFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTG----AYAA--PAAPVPKPVY
GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQ-QYAA------AAKALY
GFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTSFQQ-QYAV------------
3: 227-227
estExt_Genewise1.C_3910068 1 1 U2 GTGCGTGT..GCAG
4: 236-236
AT5G19350.1 1 1 U2 GTATGAGA..CTAG
LOC_Os03g07800.1 1 1 U2 GTAATTCT..GTAG
estExt_Genewise1.C_chr_111293 1 1 U2 GTAATATT..GTAG
GSVIVP00024620001 1 1 U2 GTAATATC..ACAG
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
---AAYGAQPSPQ--AFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG
---AAYGAQPSPQ--AFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG
---AAYGAQPSPQ--AFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG
PVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPAT
P--AAGYAVPQVQ--PVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPAN
P--ATAYAMPQLQ--AVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQFGELIYVKIPVG
P--ATAYAMPQLQ--AVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQFGELIYVKIPVG
P--VPAYTTAPVN--TVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPG
P--VPAYTSPVVQ--VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPG
P--VPAYTSPVVQ--VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPG
P--APAYTTPPLQ--ALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAG
---PKGHNSSRPRNYVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIPAG
5: 266-266
estExt_Genewise1.C_3910068 2 0 U2 GTAAGGCA..GTAG
AT5G19350.1 2 0 U2 GTAAGTTT..ACAG
LOC_Os03g07800.1 2 0 U2 GTAAGAAC..GCAG
estExt_Genewise1.C_chr_111293 2 0 U2 GTATGGAC..ACAG
Glyma13g41500.1 0 0 U2 GTAAGTTT..GCAG
Glyma13g41500.2 0 0 U2 GTAAGTTT..GCAG
GSVIVP00024620001 2 0 U2 GTGAGTCT..GCAG
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTSDPAWGHHQDPNQWNA
KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTADPGWGQHQDPNQWNA
KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTADPGWGQHQDPNQWNA
KGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQD-----GWVTQADPNQWNG
KACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAVWSQQADPNQWAS
KGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSSAVWSQQADPNQWAN
KGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPSAVWSQQADPNQWAN
KACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSA
KGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSA
KGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTAR---------QMDPNQWSA
RGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSS
RGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGK-----------------------
6: 309-309
estExt_Genewise1.C_3910068 3 2 U2 GTATGCGT..GCAG
AT5G19350.1 3 2 U2 GTAGGCCA..CCAG
LOC_Os03g07800.1 3 2 U2 GTGGGTAA..TCAG
estExt_Genewise1.C_chr_111293 3 2 U2 GTAAGTGC..ACAG
Glyma13g41500.1 1 2 U2 GTCTTCCT..GCAG
Glyma13g41500.2 1 2 U2 GTCTTCCT..GCAG
GSVIVP00024620001 3 2 U2 GTTTGTTC..TTAG
7: 340-342
AT5G19350.1 4 0 U2 GTAAAAGC..ATAG
LOC_Os03g07800.1 4 0 U2 GTAATCTC..GCAG
estExt_Genewise1.C_chr_111293 4 0 U2 GTATATCT..GCAG
Glyma13g41500.1 2 0 U2 GTGATTTT..CTAG
GSVIVP00024620001 4 0 U2 GTGAATTT..GTAG
8: 345-345
estExt_Genewise1.C_3910068 4 0 U2 GTAAGTCG..GCAG
9: 351-351
Glyma13g41500.2 2 0 U2 GTGATTTT..ACAG
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
AGYYQGYAQ-GYDQYGYPAPAPQDPAYAQYGNYPGYGNYPQQQAS------VAVSAVPSV
GGYYQGYAQ-GYDQYGYPAQPPQDPAYAQYGNYPGYGNYPQQGDAQAS---VAVSAVPSV
GGYYQGYAQ-GYDQYGYPAQPPQDPAYAQYGNYPGYGNYPQQGDAQAS---VAVSAVPSV
---YYGYGQ-GYDAYAY--GATQDPSVYAYGGY-GYPQYPQQGEGTQD---ISNSAAGGV
A--YYGY---GYDAYGY----AQDPS-YAYNSYAGYTQYPQQVEGATDMASAAGSHAPGM
T--YYGY---GYDAYGY----AQDPS-YAYGAYAGYSQYPQQVEGTVDATSVAGSH-PGM
T--YYGY---GYDAYGY----AQDPS-YAYGAYAGYSQYPQQIEGGVDATSVAGSH-PGM
---YYGYGQPGYEAYAY--GAAQDPSMYAYAGYASYAQYPQQVEGAQD---VSAMSVPTL
---YYGYGQ-GYEAYAY--GPAHDPSLYAYGAYPGYAQYPQQVEGAQD---LSGMSVPTM
---YYGYGQ-GYEAYAY--GPAHDPSLYAYGAYPGYAQYPQQVEGAQD---LSGMSVPTM
A--YYGYGQ-GYDAYPY--GATQDPSLYAYGAYAGYLQYPQQARYWCS---RLGSY----
------------------------------------------------------------
10: 401-404
estExt_Genewise1.C_3910068 5 0 U2 GTACGCCG..ACAG
AT5G19350.1 5 0 U2 GTAAAGAC..TTAG
LOC_Os03g07800.1 5 0 GC GCAAGGAT..CCAG
estExt_Genewise1.C_chr_111293 5 0 U2 GTAAGGAT..GCAG
Glyma13g41500.1 3 0 U2 GTAAGCTG..TTAG
Glyma13g41500.2 3 0 U2 GTAAGCTG..TTAG
GSVIVP00024620001 5 1 U2 GTTAACAT..TGAG
Pp~estExt_Genewise1.C_3910068
Pp~gw1.219.6.1
Pp~gw1.339.2.1
At~AT5G19350.1
Os~LOC_Os03g07800.1
Zm~GRMZM2G142557_T01
Sb~estExt_Genewise1.C_chr_111293
Mt~AC146330_10.2
Gm~Glyma13g41500.1
Gm~Glyma13g41500.2
Vv~GSVIVP00024620001
Pt~gw1.IX.3509.1
EHKEEESFDPLAPPDVDKLNAAYMAVHTAPLLGRHLWLKTSDHGQAPIS
EQKEEEIFDPLAPVDVDKLNAAYMAVHTAPLLGRHLWLKTS--------
EQKEEEIFDPLAPVDVDKLNAAYMAVHTAPLLGRHLWLKTS--------
AGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQLGK
E-KE-EVYDPMNLPDVDKLNASYIAVHGRAMLGRSLWLRTSSLPQSA--
EQKE-EPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTNPLPQPT--
EQKE-EPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTNPLPQPT--
EQRE-ELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA
EQRE-ELYDPLAMPDVDKLNAAYLSVHGSAILGRSLWQKTCSSSLQQA-
EQRE-ELYDPLAMPDVDKLNAAYLSVHGSAILGRSLWQKTCSSSLQQA-
-GRD-ELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA--
-------------------------------------------------
11: 421-421
GSVIVP00024620001 6 2 U2 GTGCAGTT..AGAG
12: 436-436
estExt_Genewise1.C_3910068 6 2 U2 GTGAGTGC..GCAG
AT5G19350.1 6 2 U2 GTAAGATT..GTAG
LOC_Os03g07800.1 6 2 U2 GTACAGTT..CTAG
estExt_Genewise1.C_chr_111293 6 2 U2 GTATGACC..TTAG
Glyma13g41500.1 4 2 U2 GTAATTTT..CCAG
Glyma13g41500.2 4 2 U2 GTAATTTT..CCAG
GSVIVP00024620001 7 2 U2 GTAATTCT..CTAG


3' UTR introns