SRGD	Gene ID 636	BLASTp at NCBI	n/a	n/a		Organisms Mt ,Vv ,Os ,Gm ,Zm ,Pp ,Sb ,Pt ,At Gene count 12 Cintron count 18 Cintron classes U2 ,im ,em ,absent ,GC
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		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	MMQSPAGAGPPHGQQAEGQQQQPQQWVMMQQSGMQPQHHEEVKTLWVGDLQYWMDENYLH -----------------------------------PQSHEEVKTLWVGDLQYWMDENYLH -----------------------------------PQSHEEVKTLWVGDLQYWMDENYLH -------------------MAMMHPPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLT ---------------------------MAAAPYHQPTSLEEVRTLWIGDLQYWADENYLY ----------------------------MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLY ----------------------------MAAPYHQPTSLEEVRTLWIGDLQYWTDENYLY ----------------------------MATTYHQPASLEEVRTLWIGDLQYWVDENYLT -----------------------------MASYQQASTIEEVRTLWIGDLQYWVDEGYLS -----------------------------MASYQQASTIEEVRTLWIGDLQYWVDEGYLS --MEAQAHQQQQWMHPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLH ---------------------------------------EEVRTLWIGDLQYWADESYLT	1: 28-28 AC146330_10.2 0 0 U2 ..
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKILQAYNGTQMPNTEQPFRLNW TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQAYNGTQMPNTEQPFRLNW TAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKILQAYNGTQMPNTEQPFRLNW SCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNW NCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQTYNGTQMPGTEHTFRLNW SCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQTYNGTQMPGTEHTFRLNW SCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQTYNGTQMPGTEHTFRLNW HCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNW HCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNW HCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQTYNGTQMPATDQTFRLNW SCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNW SCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNW	2: 67-67 estExt_Genewise1.C_3910068 0 0 U2 GTACTTGT..GCAG AT5G19350.1 0 0 U2 GTATCTCT..GCAG LOC_Os03g07800.1 0 0 U2 GTAGGTTT..GCAG estExt_Genewise1.C_chr_111293 0 0 U2 GTAGGCGA..GCAG GSVIVP00024620001 0 0 U2 GTCCTCTC..GTAG
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY ASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGY ASFGSGQ-KVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGY ASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGY ASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGY ASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGY ASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGY ASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGY ASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGY ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGY ASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGY
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	GFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGPNQ-LNPK---VSPVAVATY GFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQ-LNPKVDAVSPVAVATY GFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQ-LNPKVDAVSPVAVATY GFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQ-QYVT--------KAVY GFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQL-QYGA-------AKAMY GFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQL-QYSA-------AKAVY GFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQL-QYSA-------AKAVY GFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIY GFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTG----AYAA--PAAPVPKPVY GFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTG----AYAA--PAAPVPKPVY GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQ-QYAA------AAKALY GFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTSFQQ-QYAV------------	3: 227-227 estExt_Genewise1.C_3910068 1 1 U2 GTGCGTGT..GCAG 4: 236-236 AT5G19350.1 1 1 U2 GTATGAGA..CTAG LOC_Os03g07800.1 1 1 U2 GTAATTCT..GTAG estExt_Genewise1.C_chr_111293 1 1 U2 GTAATATT..GTAG GSVIVP00024620001 1 1 U2 GTAATATC..ACAG
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	---AAYGAQPSPQ--AFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG ---AAYGAQPSPQ--AFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG ---AAYGAQPSPQ--AFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAG PVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPAT P--AAGYAVPQVQ--PVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPAN P--ATAYAMPQLQ--AVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQFGELIYVKIPVG P--ATAYAMPQLQ--AVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQFGELIYVKIPVG P--VPAYTTAPVN--TVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPG P--VPAYTSPVVQ--VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPG P--VPAYTSPVVQ--VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPG P--APAYTTPPLQ--ALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAG ---PKGHNSSRPRNYVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIPAG	5: 266-266 estExt_Genewise1.C_3910068 2 0 U2 GTAAGGCA..GTAG AT5G19350.1 2 0 U2 GTAAGTTT..ACAG LOC_Os03g07800.1 2 0 U2 GTAAGAAC..GCAG estExt_Genewise1.C_chr_111293 2 0 U2 GTATGGAC..ACAG Glyma13g41500.1 0 0 U2 GTAAGTTT..GCAG Glyma13g41500.2 0 0 U2 GTAAGTTT..GCAG GSVIVP00024620001 2 0 U2 GTGAGTCT..GCAG
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTSDPAWGHHQDPNQWNA KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTADPGWGQHQDPNQWNA KGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTADPGWGQHQDPNQWNA KGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQD-----GWVTQADPNQWNG KACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAVWSQQADPNQWAS KGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSSAVWSQQADPNQWAN KGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPSAVWSQQADPNQWAN KACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSA KGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWSA KGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTAR---------QMDPNQWSA RGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSS RGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGK-----------------------	6: 309-309 estExt_Genewise1.C_3910068 3 2 U2 GTATGCGT..GCAG AT5G19350.1 3 2 U2 GTAGGCCA..CCAG LOC_Os03g07800.1 3 2 U2 GTGGGTAA..TCAG estExt_Genewise1.C_chr_111293 3 2 U2 GTAAGTGC..ACAG Glyma13g41500.1 1 2 U2 GTCTTCCT..GCAG Glyma13g41500.2 1 2 U2 GTCTTCCT..GCAG GSVIVP00024620001 3 2 U2 GTTTGTTC..TTAG 7: 340-342 AT5G19350.1 4 0 U2 GTAAAAGC..ATAG LOC_Os03g07800.1 4 0 U2 GTAATCTC..GCAG estExt_Genewise1.C_chr_111293 4 0 U2 GTATATCT..GCAG Glyma13g41500.1 2 0 U2 GTGATTTT..CTAG GSVIVP00024620001 4 0 U2 GTGAATTT..GTAG 8: 345-345 estExt_Genewise1.C_3910068 4 0 U2 GTAAGTCG..GCAG 9: 351-351 Glyma13g41500.2 2 0 U2 GTGATTTT..ACAG
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	AGYYQGYAQ-GYDQYGYPAPAPQDPAYAQYGNYPGYGNYPQQQAS------VAVSAVPSV GGYYQGYAQ-GYDQYGYPAQPPQDPAYAQYGNYPGYGNYPQQGDAQAS---VAVSAVPSV GGYYQGYAQ-GYDQYGYPAQPPQDPAYAQYGNYPGYGNYPQQGDAQAS---VAVSAVPSV ---YYGYGQ-GYDAYAY--GATQDPSVYAYGGY-GYPQYPQQGEGTQD---ISNSAAGGV A--YYGY---GYDAYGY----AQDPS-YAYNSYAGYTQYPQQVEGATDMASAAGSHAPGM T--YYGY---GYDAYGY----AQDPS-YAYGAYAGYSQYPQQVEGTVDATSVAGSH-PGM T--YYGY---GYDAYGY----AQDPS-YAYGAYAGYSQYPQQIEGGVDATSVAGSH-PGM ---YYGYGQPGYEAYAY--GAAQDPSMYAYAGYASYAQYPQQVEGAQD---VSAMSVPTL ---YYGYGQ-GYEAYAY--GPAHDPSLYAYGAYPGYAQYPQQVEGAQD---LSGMSVPTM ---YYGYGQ-GYEAYAY--GPAHDPSLYAYGAYPGYAQYPQQVEGAQD---LSGMSVPTM A--YYGYGQ-GYDAYPY--GATQDPSLYAYGAYAGYLQYPQQARYWCS---RLGSY---- ------------------------------------------------------------	10: 401-404 estExt_Genewise1.C_3910068 5 0 U2 GTACGCCG..ACAG AT5G19350.1 5 0 U2 GTAAAGAC..TTAG LOC_Os03g07800.1 5 0 GC GCAAGGAT..CCAG estExt_Genewise1.C_chr_111293 5 0 U2 GTAAGGAT..GCAG Glyma13g41500.1 3 0 U2 GTAAGCTG..TTAG Glyma13g41500.2 3 0 U2 GTAAGCTG..TTAG GSVIVP00024620001 5 1 U2 GTTAACAT..TGAG
Pp~estExt_Genewise1.C_3910068 Pp~gw1.219.6.1 Pp~gw1.339.2.1 At~AT5G19350.1 Os~LOC_Os03g07800.1 Zm~GRMZM2G142557_T01 Sb~estExt_Genewise1.C_chr_111293 Mt~AC146330_10.2 Gm~Glyma13g41500.1 Gm~Glyma13g41500.2 Vv~GSVIVP00024620001 Pt~gw1.IX.3509.1	EHKEEESFDPLAPPDVDKLNAAYMAVHTAPLLGRHLWLKTSDHGQAPIS EQKEEEIFDPLAPVDVDKLNAAYMAVHTAPLLGRHLWLKTS-------- EQKEEEIFDPLAPVDVDKLNAAYMAVHTAPLLGRHLWLKTS-------- AGAEQELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSLTSQLGK E-KE-EVYDPMNLPDVDKLNASYIAVHGRAMLGRSLWLRTSSLPQSA-- EQKE-EPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTNPLPQPT-- EQKE-EPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLKTNPLPQPT-- EQRE-ELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA EQRE-ELYDPLAMPDVDKLNAAYLSVHGSAILGRSLWQKTCSSSLQQA- EQRE-ELYDPLAMPDVDKLNAAYLSVHGSAILGRSLWQKTCSSSLQQA- -GRD-ELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA-- -------------------------------------------------	11: 421-421 GSVIVP00024620001 6 2 U2 GTGCAGTT..AGAG 12: 436-436 estExt_Genewise1.C_3910068 6 2 U2 GTGAGTGC..GCAG AT5G19350.1 6 2 U2 GTAAGATT..GTAG LOC_Os03g07800.1 6 2 U2 GTACAGTT..CTAG estExt_Genewise1.C_chr_111293 6 2 U2 GTATGACC..TTAG Glyma13g41500.1 4 2 U2 GTAATTTT..CCAG Glyma13g41500.2 4 2 U2 GTAATTTT..CCAG GSVIVP00024620001 7 2 U2 GTAATTCT..CTAG
		3' UTR introns