SRGD Gene ID 61 BLASTp at NCBI n/a n/a  
OrganismsAt ,Mt ,Vv ,Os ,Gm ,Zm ,Pp ,Lj ,Sb ,Pt
Gene count34
Cintron count25
Cintron classesU2 ,im ,absent ,GC ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
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MGPLVVSPCRVRASLEESAALVAAPFPFPPHPLLSLSPSHPSSTRRSSSPPSRAASGSGE
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Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
MSHFGRAG-PPDIRDTYSLLVLNITFR-------------TSADDLYPLFDRYGKVVDIF
MSHFGRAG-PPDIRDTYSLLVLNITFR-------------TSADDLYPLFDRYGKVVDIF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFDRYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFDRYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFDRYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLYPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNISFR-------------TTADDLFPLFERYGKVVDVF
MSHFGRSG-PPDISDTYSLLVLNITFR-------------TTADDLYPLFAKYGKVVDVF
MSHFGRSG-PPDIRDTFSLLVLNITFR-------------TTADDLFPLFDKYGKVVDVF
MSHFGRSG-PPDIKDTFSLLVLNITFR-------------TTADDLFPFFDKYGKVVDIF
MSHFGRSG-PPDIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDVF
MSHFGRQG-PPDIADTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSHFGRSG-PPDIADTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSHFGRSG-PPDITDTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSHFGRSG-PPDISDTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSHFGRSG-PPDISDTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSHFGRSG-PPDISDTYSLLVLNITFR-------------TTADDLFPLFDKYGKVVDIF
MSRFGRSG-PPPIRDTYSLLVLNITFR-------------TTADDLSPLFEKYGEVVDIY
MSRFGRSG-PPPIRDTYSLLVLNITFR-------------TTADDLSPLFEKYGEVVDIY
MSRFGRSG-PPPIRDTYSLLVLNITFR-------------TTADDLSPLFEKYGEVVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSG-PPPIRDTYSLLVLNITFREFPASVDPFPSPGTTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
MSRFGRSGPPPPIRDTYSLLVLNITFR-------------TTADDLFPLFDKYGEIVDIY
2: 60-60
AT5G64200.1 0 0 U2 ..
AC144459_24.2 0 0 U2 ..
3: 85-85
e_gw1.42.218.1 0 1 U2 GTATGTCA..TCAG
estExt_fgenesh1_pg.C_3970019 0 1 U2 GTACGTGA..TCAG
LOC_Os08g37960.1 0 1 U2 GTGAGCAA..GCAG
LOC_Os08g37960.2 0 1 U2 GTGAGCAA..GCAG
LOC_Os08g37960.3 0 1 U2 GTGAGCAA..GCAG
estExt_Genewise1.C_chr_78077 0 1 U2 GTGAGCGA..GCAG
GRMZM2G016296_T01 0 1 U2 GTGAGGGA..ACAG
GRMZM2G016296_T03 0 1 U2 GTGAGGGA..ACAG
GRMZM2G016296_T05 0 1 U2 GTGAGGGA..ACAG
GRMZM2G016296_T06 0 1 U2 GTGAGGGA..ACAG
GRMZM2G016296_T02 0 1 U2 GTGAGGGA..ACAG
GRMZM2G016296_T04 0 1 U2 GTGAGGGA..ACAG
estExt_Genewise1_v1.C_LG_II0296 0 1 U2 GTATTTGT..GCAG
GSVIVP00015240001 0 1 U2 GTAATTTC..CCAG
grail3.0067008905 0 1 U2 GTAAGCTC..TCAG
chr4.CM0182.440.nc 0 1 U2 GTAAGCTC..GTAG
Glyma05g24540.1 0 1 U2 GTAAGCTC..TCAG
Glyma05g24540.2 0 1 U2 GTAAGCTC..TCAG
Glyma08g07730.1 0 1 U2 GTAAGCTC..TCAG
LOC_Os07g43050.1 0 1 U2 GTCAGTTT..GCAG
LOC_Os07g43050.2 0 1 U2 GTCAGTTT..GCAG
LOC_Os07g43050.3 0 1 U2 GTCAGTTT..GCAG
4: 98-98
estExt_fgenesh1_pg.C_chr_23706 0 1 U2 GTATCCTA..GCAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
IPRDRRTGESRGFAFVRYKYADEAQKAIERLDGRTVDGRNIVVQSAKYGRNDEPIHRGRI
IPRDRRTGESRGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGRI
IPRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRI
IPRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRI
IPRDRRTGDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRI
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRV
IPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRV
IPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRDGRI
IPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRI
IPRDRRTGDSRGFAFVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRI
IPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRI
IPRDRRTGESRGFAFVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERIHKGRI
IPKDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRI
IPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI
IPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI
IPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRI
IPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRI
5: 124-124
e_gw1.42.218.1 1 2 U2 GTGAGGAC..GCAG
estExt_fgenesh1_pg.C_3970019 1 2 U2 GTAAAGTT..GCAG
LOC_Os08g37960.1 1 2 U2 GTGAGGAG..TAAG
LOC_Os08g37960.2 1 2 U2 GTGAGGAG..TAAG
LOC_Os08g37960.3 1 2 U2 GTGAGGAG..TAAG
estExt_Genewise1.C_chr_78077 1 2 U2 GTGAGGCC..GCAG
GRMZM2G016296_T01 1 2 U2 GTCAGGCG..GCAG
GRMZM2G016296_T03 1 2 U2 GTCAGGCG..GCAG
GRMZM2G016296_T05 1 2 U2 GTCAGGCG..GCAG
GRMZM2G016296_T06 1 2 U2 GTCAGGCG..GCAG
GRMZM2G016296_T02 1 2 U2 GTCAGGCG..GCAG
GRMZM2G016296_T04 1 2 U2 GTCAGGCG..GCAG
estExt_Genewise1_v1.C_LG_II0296 1 2 U2 GTATATAA..AAAG
GSVIVP00015240001 1 2 U2 GTTTCATC..TTAG
grail3.0067008905 1 2 U2 GTTGTTAT..TTAG
chr4.CM0182.440.nc 1 2 U2 GTACTGTA..GAAG
Glyma05g24540.1 1 2 U2 GTACTTTC..GAAG
Glyma05g24540.2 1 2 U2 GTACTTTC..GAAG
Glyma08g07730.1 1 2 U2 GTTTTCAA..GAAG
LOC_Os07g43050.1 1 2 U2 GTTAGTAT..CTAG
LOC_Os07g43050.2 1 2 U2 GTTAGTAT..CTAG
LOC_Os07g43050.3 1 2 U2 GTTAGTAT..CTAG
estExt_fgenesh1_pg.C_chr_23706 1 2 U2 GTGAGTGC..GTAG
6: 151-151
e_gw1.42.218.1 2 1 U2 GTGATTCC..ACAG
estExt_fgenesh1_pg.C_3970019 2 1 U2 GTAACTAA..GCAG
LOC_Os08g37960.1 2 1 U2 GTGCGTAA..GCAG
LOC_Os08g37960.2 2 1 U2 GTGCGTAA..GCAG
LOC_Os08g37960.3 2 1 U2 GTGCGTAA..GCAG
estExt_Genewise1.C_chr_78077 2 1 U2 GTGGGGTC..GCAG
GRMZM2G016296_T01 2 1 U2 GTGGGCTT..GCAG
GRMZM2G016296_T03 2 1 U2 GTGGGCTT..GCAG
GRMZM2G016296_T05 2 1 U2 GTGGGCTT..GCAG
GRMZM2G016296_T06 2 1 U2 GTGGGCTT..GCAG
GRMZM2G016296_T02 2 1 U2 GTGGGCTT..GCAG
GRMZM2G016296_T04 2 1 U2 GTGGGCTT..GCAG
estExt_Genewise1_v1.C_LG_II0296 2 1 U2 GTTAGTGT..GTAG
GSVIVP00015240001 2 1 U2 GTTAGTGT..CCAG
grail3.0067008905 2 1 U2 GTATACTC..TCAG
chr4.CM0182.440.nc 2 1 U2 GTATGCTT..TCAG
Glyma05g24540.1 2 1 U2 GTATGTGC..TCAG
Glyma05g24540.2 2 1 U2 GTATGTGC..TCAG
Glyma08g07730.1 2 1 U2 GTATGTAT..TCAG
LOC_Os07g43050.1 2 1 U2 GTGAGATT..TCAG
LOC_Os07g43050.2 2 1 U2 GTGAGATT..TCAG
LOC_Os07g43050.3 2 1 U2 GTGAGATT..TCAG
estExt_fgenesh1_pg.C_chr_23706 2 1 U2 GTGAGTTT..GCAG
7: 173-173
e_gw1.42.218.1 3 2 U2 GTGAGTAA..GCAG
estExt_fgenesh1_pg.C_3970019 3 2 U2 GTGAGTTC..GCAG
LOC_Os08g37960.1 3 2 U2 GTGAGTAG..GTAG
LOC_Os08g37960.2 3 2 U2 GTGAGTAG..GTAG
LOC_Os08g37960.3 3 2 U2 GTGAGTAG..GTAG
estExt_Genewise1.C_chr_78077 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T01 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T03 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T05 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T06 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T02 3 2 U2 GTGAGTAG..GTAG
GRMZM2G016296_T04 3 2 U2 GTGAGTAG..GTAG
estExt_Genewise1_v1.C_LG_II0296 3 2 U2 GTGAGTAG..TCAG
GSVIVP00015240001 3 2 U2 GTAAGTCA..ACAG
grail3.0067008905 3 2 U2 GTAAGTTC..TCAG
chr4.CM0182.440.nc 3 2 U2 GTAAGTTG..GCAG
Glyma05g24540.1 3 2 U2 GTAAGTGC..GCAG
Glyma05g24540.2 3 2 U2 GTAAGTGC..GCAG
Glyma08g07730.1 3 2 U2 GTAAGTTC..GCAG
LOC_Os07g43050.1 3 2 U2 GTAAGATG..GCAG
LOC_Os07g43050.2 3 2 U2 GTAAGATG..GCAG
LOC_Os07g43050.3 3 2 U2 GTAAGATG..GCAG
estExt_fgenesh1_pg.C_chr_23706 3 2 U2 GTAAGACA..ACAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
TDTTVRKVSRSRSQSPR-----------------------RPR-EEDRH--------SRD
TDTGMKRVSRSASRSPK-----------------------RPRSSRDDD---RY---TRH
IEEVEKSRDRSRSRSP------------------------RRR-HRDDH---R----DRE
IEEVEKSRDRSRSRSP------------------------RRR-HRDDH---R----DRE
IEEVEKSRDRSRSRSP------------------------RRR-HRDDH---R----DRE
KEGAEKSRDRSRSRSP------------------------RPR-NR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
KEGVEKSQDRSRSRSP------------------------RPR-HR-----------DRD
VEPPPKSR-RSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRR-SRDDY---R----EKD
VESTSKIKSRSRSRSP------------------------RPK-YWDGY---RDR--DRD
VETFPKSRGRSRSHSP------------------------RRR-YRDDN---R----DRD
IETSSKSKGRSRSRSP------------------------RPR-HRDEY---R----DRD
IETSPRSK-SSRSRSPS-----------------------RRR-HHDDY---R----DKG
VETPSKSRHRSRSRSP------------------------RRR--------------DRD
IESEERAKQGSRSRSP------------------------RRR-HRDDHRSSR----DRD
IETSPRSR-RSRSRSP------------------------RKR-HRDDY---R----DRD
IETSPRSR-RSRSRSP------------------------RKR-HRDDY---R----DRD
IETSPRSR-RSRSRSP------------------------RKR-HRDDY---K----DRD
METVPRSRGRSRSRSP------------------------RRG-YRDDY---R----ERD
METVPRSRGRSRSRSP------------------------RRG-YRDDY---R----ERD
METVPRSRGRSRSRSP------------------------RRG-YRDDY---R----ERD
MEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
MEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
MEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
MEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
MEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
VEPVPRPRGRSRSRSP------------------------RRR-YRDDY---RDDYQDRD
VEPVPRPGGRSRSHSP------------------------RRR-YRDDY---RDDH-DRD
VEPVPRPGGRSRSHSP------------------------RRR-YRDDY---RDDH-DRD
VEPVPRPGGRSRSHSP------------------------RRR-YRDDY---RDDH-DRD
8: 221-221
e_gw1.42.218.1 4 2 U2 GTATTTAA..ACAG
estExt_fgenesh1_pg.C_3970019 4 2 U2 GTAAGTTC..GCAG
LOC_Os08g37960.1 4 2 U2 GTGCATAC..TCAG
LOC_Os08g37960.2 4 2 U2 GTGCATAC..TCAG
LOC_Os08g37960.3 4 2 U2 GTGCATAC..TCAG
estExt_Genewise1.C_chr_78077 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T01 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T03 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T05 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T06 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T02 4 2 U2 GTGAAGAC..CTAG
GRMZM2G016296_T04 4 2 U2 GTGAAGAC..CTAG
estExt_Genewise1_v1.C_LG_II0296 4 2 U2 GTAAGGAT..TCAG
GSVIVP00015240001 4 2 U2 GTGAAGAT..TTAG
grail3.0067008905 4 2 U2 GTACCTTT..CTAG
chr4.CM0182.440.nc 4 2 U2 GTATGCAT..GCAG
Glyma05g24540.1 4 2 U2 GTAGTTTT..GCAG
Glyma05g24540.2 4 2 U2 GTAGTTTT..GCAG
Glyma08g07730.1 4 2 U2 GTTTGCTG..GCAG
LOC_Os07g43050.1 4 2 U2 GTATTACA..GAAG
LOC_Os07g43050.2 4 2 U2 GTATTACA..GAAG
LOC_Os07g43050.3 4 2 U2 GTATTACA..GAAG
estExt_fgenesh1_pg.C_chr_23706 4 2 U2 GTATAGCA..GAAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
TRR----RSRSRDRYER-ERYR-GGDRDDRY--------------QGGERDRERERERGR
YRSRSRSRSRSRDRYER-SRHHDDDCRERERERDRGRGSRRRSPSRSLSRSRSLSRDRGD
RRG--RSRSRSRERHGR------DRDRDHRRHSRSRSRSRSRSRSRSLSPD-YKNRRRGR
RRG--RSRSRSRERHGR------DRDRDHRRHSRSRSRSRSRSRSRSLSPD-YKNRRRGR
RRG--RSRSRSRERHGR------DRDRDHRRHSRSRSRSRSRSRSRSLSPD-YKNRRRGR
HRRRSRSRSRSRERHGR------DRDRDYRR------RSRSRSRSPSSSPD-RKSHRRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
HRS--QSRSRSRERHVR------DRDRGYRR------RSRSRSRSLSSSPD-NRSHHRAR
YRK--RSRSRSYDRRER---HE-EKDRDHRR----------RTRSRSASPD-EKRRVRGR
YRR--RSRSRSRDRSEQ-DGYR-GRDKDYHR------------RSVSCSPDRRKDRGR--
YRR--RSRSRSYDRYES-DRYR-GRERDYRR----------RSRSHSASPD-YR---RGR
YRK--RSRSRSRGRNDR-DRYR-GKERDSRR----------RSRSRSASPDHHKDRGRGR
YRR--RSRSRSYDRYER-DRYRGGRDRDYRR----------RSRSRSASPD-YKRRGRGR
SRK--RSRSRKF------------------------------------------------
YRR--RSRSRSYDKYERGDRHR-GRDRDYRR----------RSRSRSASLD-YKGRG---
YRR--RSRSRSYDRYER-DRHR-GRDKDYRR----------RSRSRSASLD-YKGRGRGR
YRR--RSRSRSYDRYER-DRHR-GRDKDYRR----------RSRSRSASLD-YKGRGRGR
YRR--RSRSRSYDRYER-DRHR-GRDKDYRR----------RSRSRSASLD-YKGRGRGR
YRK--RSRSR--DRYGR-DRYR---ERDYRR----------RSRSRSYTPDDYRRRGRDS
YRK----RSRSRDRYGR-DRYR---ERDYRR----------RSRSRSYTPDDYRRRGRDS
YRK--RSRSR--DRYGR-DRYR---ERDYRR----------RSRSRSYTPDDYRRRGRDS
YRR--RSRSQSRDRYAR-DRYR---DRDYRH----------RSLSRRYSPDDYKKRGRDR
YRR--RSRSQSRDRYAR-DRYR---DRDYRH----------RSLSRRYSPDDYKKRGRD-
YRR--RSRSQSRDRYAR-DRYR---DRDYRH----------RSLSRSLSPA---------
YRR--RSRSQSRDRYAR-DRYR---DRDYRH----------RSLSRSLSPA---------
YRR--RSRSQSRDRYAR-DRYR---DRDYRH----------RSLSRRYSPDDYKKRGRDS
YRR--RSRSRSRDRYAR-DRYR---DRDYRR----------RSPSRSYSPEDYKKRGRDS
YRR--RSRSRSRDRYTR-DRYR---DRDYRH----------RSPSRSYSPDDYKKRGRDS
YRR--RSRSRSRDRYTR-DRYR---DRDYRH----------RSPSRSYSPDDYKKRGRDS
YRR--RSRSRSRDRYTR-DRYR---DRDYRH----------RSPSRSYSPDDYKKRGRDS
9: 249-249
grail3.0067008905 5 1 GC GCAGGGAC..TAAG
10: 298-298
LOC_Os07g43050.1 5 2 U2 GTAATTAT..GCAG
LOC_Os07g43050.2 5 2 U2 GTAATTAT..GCAG
LOC_Os07g43050.3 5 2 U2 GTAATTAT..GCAG
estExt_fgenesh1_pg.C_chr_23706 5 2 U2 GTATATAC..GCAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
-DVRRRSASRSTSRSRSHPLSYCFIFRG---------------SESPDLKASPPLRRMSV
VKRSSRSASDKRSPKRE-PSSRRKLSPSPQEKRSMSRSLSRSISRSPRKSESEEPVKEAT
DDDKRRSKSKSKSKSRS-KSRSRSKSRS------KSRSRSRSRSRSRSFHSASPTRHSAS
DDDKRRSKSKSKSKSRS-KSRSRSKSRS------KSRSRSRSRSRSRSFHSASPTRHSAS
DDDKRRSKSKSKSKSRS-KSRSRSKSRS-----------KSRSRSRSRSRSRSF--HSAS
DDGKRKSRSKSRSKSRS-RSRSKSMSRS-------RSRSRSYHSASPARRSASP--HKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
DDDKRKSMSKSRSRSRS-TSRSRSYYSA-----------------SPARHSASP--RKSP
YDNESRSHSRSLSASPA-RRSPRSSSPQ-----KTSPAREVSPDKRSNERSPSP--RRSL
------------------------------------------------------------
YDDGRRNLSRSRSID---SVSPTRYTPS-------------------PKRNFPP--RVTP
YDDER----RSRSRSYG-SASPARRSPS-------------------PRGSPSP--RRT-
YDDERRSRSRSRSVD---SRSPARRSPS-------------------PKRSPSP--KKSI
------------------------------------------------------------
------------------------------------------------------------
YDDERNSRSRSRSVD---SRSPARRSPS-------------------PRRSPSP--QRST
YDDERNSRSRSRSVD---SRSPARRSPS-------------------PRRSPSP--QRST
YDDERNSRSRSRSVD---SGSPARRSPS-------------------PRRSPSP--QRST
VSPARRSLSRSRSRSYS-PDDYRKRGKHSQSPVCKSPSAKRSPSMSPARRSPSA------
VSPARRSLSRSRSRSYS-PDDYRKRGKH-------SPSAKRSPSMSPARRSPSA------
VSPARRSLSRSRSRSYS-PDDYRKRGKH-------SPSAKRSPSMSPARRSPSA------
H------MHRTFV-----------------------------------------------
-----RHMHRTFV-----------------------------------------------
----RRSPSHSRSRSYT-PDDYKRRGKD---------------SASPASRSPS-------
----RRSPSHSRSRSYT-PDDYKRRGKD---------------SASPASRSPS-------
LSPARRSPSHSRSRSYT-PDDYKRRGKD---------------SASPASRSPS-------
LSPARRSPSRSRSRSYS-PDDYKRRGRD---------------SASPASRSPS-------
LSPERRSPRRSR----S-PDDYKRRGRD---------------SASPASKSPS-------
LSPERRSPRRSRS-----PDDYKRRGRD---------------SASPASKSPS-------
LSPERRSPRRSRS-----PDDYKRRGRD--------------------------------
11: 311-311
estExt_fgenesh1_pg.C_3970019 5 2 U2 GTAATTGA..GCAG
12: 314-316
e_gw1.42.218.1 5 1 U2 GTAGTCGA..TTAG
GSVIVP00015240001 5 2 U2 GTATTATA..GAAG
Glyma05g24540.1 5 2 U2 GTATTCAT..GTAG
Glyma05g24540.2 5 2 U2 GTATTCAT..GTAG
Glyma08g07730.1 5 2 U2 GTCTTCAA..GTAG
13: 325-327
GRMZM2G016296_T01 5 2 U2 GTGCCTCA..ACAG
GRMZM2G016296_T03 5 2 U2 GTGCCTCA..ACAG
GRMZM2G016296_T05 5 2 U2 GTGCCTCA..ACAG
GRMZM2G016296_T06 5 2 U2 GTGCCTCA..ACAG
GRMZM2G016296_T02 5 2 U2 GTGCCTCA..ACAG
GRMZM2G016296_T04 5 2 U2 GTGCCTCA..ACAG
LOC_Os07g43050.1 6 2 U2 GTATGCAC..ACAG
LOC_Os07g43050.2 6 2 U2 GTATGCAC..AAAG
LOC_Os07g43050.3 6 2 U2 GTATGCAC..AAAG
estExt_fgenesh1_pg.C_chr_23706 6 2 U2 GTTTGCAA..GCAG
14: 342-342
estExt_Genewise1.C_chr_78077 5 2 U2 GTTCCTCA..ACAG
15: 349-349
LOC_Os08g37960.1 5 2 U2 GTGCTTCA..TTAG
LOC_Os08g37960.2 5 2 U2 GTGCTTCA..TTAG
16: 356-356
LOC_Os08g37960.3 5 2 U2 GTGCTTCA..ACAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
SPGNRSLSAS---PVQG---SISPEQPH---RSQS-PDVPRSVSPTQSDEA---------
ARNGNASPARDSESPER---GVSPPRRQTSPEARSDSPRQRSLSPEPARSGSGEQPRSPS
PPLKGSTPRR---SPAR---NGSPEKET---NGKG-SPPSRSVSP-SPQRAGSRSPGSDD
PPLKGSTPRR---SPAR---NGSPEKET---NGKG-SPPSRSVSP-SPQRAGSRSPGSDD
PPLKGSTPRR---SPAR---NGSPEKET---NGKG-SPPSRSVSP-SPQRAGSRSPGSDD
-------------PPRR---SPTPEKHT---NGKD-SPLSRSVSP-SPKRASSHSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
-------------PPQR---SPTPAKHA---NGKV-APLSRCVSP-LPKRATSRSPGSDG
SPRSPALQKA---SPSK---EMSPERRS---NER--SPSPGSPAPLRKVDAASRSQSPYA
------------------------------------------------------------
-------------SPPR---GGSQDRLS---GEER-SP-SRSISP-RGRPAGSRSPSLHK
-------------PPSR---EESPVGRK---RNER-SPTPKSVSP-RGRPADSRSPSPHN
SPKKSPSP-----SPRR----ESPDTRS---RDGR-SPTSRSVSP-RGRPEASQSPSPRN
-------------PCER-------------------------------------------
------------------------------------------------------------
SPQRSTSPRK---SP-R---GESPANRS---REER-SPTPRSVSP-RGRPDASRSPSPRN
SPQRSTSPRK---SP-R---GESPANRS---REER-SPTPRSVSP-RGRPDASRSPSPRN
SPQRSPSPRK---SP-R---GESPANRS---RDGR-SPTPRSVSP-RGRPDASRSPSPRN
-------------SPARRSPSASPVRRSPSRSPRR-TPSSQEGSPVKRYDEPRRSRSPST
-------------SPARRSPSASPVRRSPSRSPRR-TPSSQEGSPVKRYDEPRRSRSPST
-------------SPARRSPSASPVRRSPSRSPRR-TPSSQEGSPVKRYDEPRRSRSPST
------------------------------------------------------------
------------------------------------------------------------
---RSPPRKT---PPSP---KRSPVRHN---DDR--SPRSRSPST---------------
---RSPPRKT---PPSP---KRSPVRHN---DDR--SPRSRSPST---------------
---RSPPRKT---PPSP---KRSPVRHN---DDR--SPRSRSPST---------------
---RSPPRKM---SPSP---ERSPAKHN---DDR--SPRSRSPST---------------
---RSPPRKM---SPSP---ERSPVRRN---NDR--SPRSRSPST---------------
---RSPPRKM---SPSP---ERSPVRRN---NDR--SPRSRSPST---------------
-------------SK---------------------------------------------
17: 368-368
estExt_fgenesh1_pg.C_3970019 6 2 U2 GTGAGATT..TCAG
Pp~e_gw1.42.218.1
Pp~estExt_fgenesh1_pg.C_3970019
Os~LOC_Os08g37960.1
Os~LOC_Os08g37960.2
Os~LOC_Os08g37960.3
Sb~estExt_Genewise1.C_chr_78077
Zm~GRMZM2G016296_T01
Zm~GRMZM2G016296_T03
Zm~GRMZM2G016296_T05
Zm~GRMZM2G016296_T06
Zm~GRMZM2G016296_T02
Zm~GRMZM2G016296_T04
At~AT5G64200.1
Pt~estExt_Genewise1_v1.C_LG_II0296
Vv~GSVIVP00000274001
Vv~GSVIVP00015240001
Mt~AC144459_24.2
Pt~grail3.0067008905
Lj~chr4.CM0182.440.nc
Gm~Glyma05g24540.1
Gm~Glyma05g24540.2
Gm~Glyma08g07730.1
Os~LOC_Os07g43050.1
Os~LOC_Os07g43050.2
Os~LOC_Os07g43050.3
Zm~GRMZM2G077823_T02
Zm~GRMZM2G077823_T03
Zm~GRMZM2G077823_T01
Zm~GRMZM2G077823_T04
Zm~GRMZM2G077823_T05
Sb~estExt_fgenesh1_pg.C_chr_23706
Zm~GRMZM2G025281_T01
Zm~GRMZM2G025281_T02
Zm~GRMZM2G025281_T03
----------------------------------
SAPSDAA---------------------------
KE--------------------------------
KE--------------------------------
KE--------------------------------
KNVEKVD---------------------------
KAIHVRSKAC------------------------
KAIHVRSKAC------------------------
KKTAFSRSHGIAEP--------------------
KVRLMSNCLLCSLLPMHLFM--------------
KE--------------------------------
KE--------------------------------
AE--------------------------------
----------------------------------
SDADVSSCSLVVSIYVHLTLHFRICLFNWMLLIL
SDADE-----------------------------
SDGDE-----------------------------
----------------------------------
----------------------------------
SNGDE-----------------------------
SNGDE-----------------------------
SNGDE-----------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
----------------------------------
18: 420-423
LOC_Os08g37960.1 6 0 U2 GTAAGTTT..TCAG
LOC_Os08g37960.2 6 0 U2 GTAAGTTT..TCAG
LOC_Os08g37960.3 6 0 U2 GTAAGTTT..TCAG
estExt_Genewise1.C_chr_78077 6 0 U2 GTTAGATT..GCAG
GRMZM2G016296_T01 6 0 U2 GTTAGATT..GAAG
GRMZM2G016296_T03 6 0 U2 GTTAGATT..GAAG
GRMZM2G016296_T05 6 0 U2 GTTAGATT..CTAG
GRMZM2G016296_T02 6 0 U2 GTTAGATT..TCAG
GRMZM2G016296_T04 6 0 U2 GTTAGATT..TCAG
GSVIVP00015240001 6 0 U2 GTAAGTCC..GTAG
Glyma05g24540.1 6 0 U2 GTAAGTAA..GCAG
Glyma05g24540.2 6 0 U2 GTAAGTAA..GCAG
Glyma08g07730.1 6 0 U2 GTAAGTAA..GCAG


3' UTR introns