SRGD	Gene ID 554	BLASTp at NCBI	n/a	n/a		Organisms Gm ,At ,Pt ,Mt ,Os ,Zm ,Pp ,Lj ,Sb Gene count 13 Cintron count 8 Cintron classes U2 ,im ,em ,absent
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	------------------------------------------------------------ -----------------------------------------------------------M -----------------------------------------------------------M ---------------------------------------------------------MAD ------------------------------------------------MSDSGEPKPSQQ ----------MEPFVVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMN ------------------------------------------------------------ ------------------------------------MNKVCLLIAILCVNCHLFNFLVCF MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFLFKLFT MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFLFKLFT ----------------------------------------------------------ME ----------------------------------------------------------ME ----------------------------------------------------------ME	2: 0-0 AC145329_30.2 0 0 U2 .. 3: 56-56 AC126016_11.2 0 0 U2 GTCTCGTT..ACAG
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	--MEAPSEAGAAAAPAAGAFFKKKIQNKNIRKRPTI--DDGDEEEENAGSAVNKGKIAKK ADGGNCGPGGGNASAPVCSFVRKP--PKNIRKRPAAP-AGSDDDDDGGGGALAAARSKKG ADGGGGGEAGSGGSAPVCSFVRKP--PKNIRKRPTAP-AGSDDDDEDGSGAIAAARAKKA GGSGSGEPGAGGGSAPVCSFVRKP--PKNMRKRPAAPAGSDDDDDGGGSGALAAARSKKG EEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDA-DEEDGDSKSESSILQNLKKVAK MAEFGNDNSNNQESQQVCTFFKKPTKSKNIRKRTIDA-DEEDGDSKSESSILQNLKKVAK --MADPTEREPQQTEAVCNFFRKPMKNKNIRKRMID--EDEDEDSKTQTSLLHSQKKAPK CSLYKYFCLFFLAFFSVCSFFRKPVNKKNIRKRTTDHQEDDEDDTNTETSLLHTQRKTFK MEDSEAKSTENQQTEQVCSFFRKPVNRKNMRKRTIEN-EDNENDSNNEESLMHVQKKNTK MEDSEAKSTENQQTEQVCSFFRKPVNRKNMRKRTIEN-EDNENDSNNEESLMHVQKKNTK DSDQPAKSAENQQTEQVCSFFRKPVNKKNLRKRTIEI-EDNEEDSNNETSLLHIQKKTLK DSDQPAKSAENQQTEQVCSFFRKPVNKKNIRKRTIVN-EDNEEDSNNETSLLHIQKKTLK DSDQPAKSAENQQTEQVCSFFRKPVNKKNIRKRTIVN-EDNEEDSNNETSLLHIQKKTLK	4: 75-75 AT1G01350.1 1 1 U2 GTTACATA..TCAG AT5G06420.1 0 1 U2 GTTACATA..TCAG estExt_Genewise1_v1.C_LG_XIV1660 1 1 U2 GTACGCAT..GCAG AC126016_11.2 1 1 U2 GTATGTAT..TCAG Glyma03g02920.1 1 1 U2 GTATGTCT..TCAG Glyma05g37520.1 1 1 U2 GTATGTCT..TCAG Glyma05g37520.2 1 1 U2 GTATGTCT..TCAG
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	GVG----RLEFNSGAPVGTSKVQNSEESDKAGEVERATFVYESTRQVQTQDDSRATAVSE PPSSTAGKLVFSTAG-------------ASSEAPR---FQYESSRTIQ-STDTRATATLE PSSTS--KLFFSSA--------------DGSSEPRR--FQYESSRTIQASTDSRATATLE PPSSAAGKLVFSTA--------------DASSEPRR--FQYESSRTIQ-STDSRATAVLE PDS----KLYFSSGP------SKSST--TTSGAPERSVFHYDSSKEIQVQNDSGATATLE PDS----NLYFSSGP---------ST--RTSGAPERPVFHYDSSKEIQVQNDSGATATLE ADN----KLYFSTGP------LKKSS--ESNAEPERLLFQFESSKEIQVQHDSRATATLE PDN----KLYFSTGS------TKPSTAAEPTQE-----FQFESSKEIQVQHDSKATATLE ADN----KLFFSTGS------SKSSASAKPNEESEKPSFHFESSKEIQVQHDSKATATLE ADN----KLFFSTGS------SKSSASAKPNEESEKPSFHFESSKEIQVQHDSKATATLE ADN----KLYFSTGS------SKSSASAEPSEESGKTVFQFESSKEIQVQHDSKATAILE PDN----KLYFSTGS------SKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLE PDN----KLYFSTGS------SKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLE
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	IETEFDRDNRAIRERVLKQASEALKSGEPS---------NSKVYKGIHGYTDHKAGFRQE TETEFDRDARSIRERQLKQAEESLKKNPSAVAASASASTAGEVYKGIHGYTDYKAGFRRE TETEFDRDARAIRERQLKQAEESLKKNPSA-PASSSGSGSGEVYKGIHGYTDYKAGFRRE TETEFDRDSRAIREKQLKQAEEFLKKNPSS---GASASASGEVYKGIHGYTDYKAGFRRE TETDFNQDARAIRERVLKKADEALKGNKKK-------ASDEKLYKGIHGYTDHKAGFRRE TETDFNQDARAIRERVLKKADHALKGNKKK-------ASDEKLYKGIHGYTDHKAGFRRE TETEFSKDARAIRERALKQADDALKGKKMS-------SGDEKLYKGIHGYTDHKAGFRRE TETDFSTDARAIRERALKQAATSLKGKAKT-------SEDDKLYKGINNYKDYKAGFRRE TETDFSRDARAIRERALKQATESLKGKSTS-------SEDVKLYKGINNYTDHKAGFRRE TETDFSRDARAIRERALKQATESLKGKSTS-------SEDVKLYKGINNYTDHKAGFRRE TETEFSKDARAIRERALKQAEESLKGKSAS-------SEDKKLYKGMNSYKDYKAGFRRE TETEFSKDARAIRERALKQAEESLKGKSPS-------SKNEKLYKGMNSYKDYKAGFRRE TETEFSKDARAIRERALKQAEESLKGKSPS-------SKNEKLYKGMNSYKDYKAGFRRE
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	HTISREKAGGAHGPLRASAHIRMTVRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS HTVSSEKAGGSHGPLRASAHIRLSQRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS HTVSSEKAGGSHGPLRASAHIRLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS HTVSSEKAGGSHGPLRAAAHIRVSQRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS	5: 299-299 estExt_gwp_gw1.C_1140075 0 1 U2 GTAACAAT..ACAG
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	GWQMEREWDQEEKLRKQRLARGEADT-EEGEGAGDDSDDEDALPFACFICREPFTDPVVT GWQLEKEYEEAEKARKRRIAMGGGGE-SDDEAADDE-DEEEALPFACFICREPFVDPVVT GWQIEKEWEEAEKARKRRIAMGGDGS-DYEAGEEDDDDDEEALPFACYICREPFVDPVVT GWQLEREHEEAQKARKRRIAMGGGDG-SDDEAADEDEDDEEALPFACYICRQPFVDPVVT GWQIEKEWEEAEKVRKRNKAMGVEDE-DDEADKDSD-EDENALPFACFICREPFVDPVVT GWQIEKEWEEAEKVRKRNKAMGVEDD-DDEADKDSD-EDENALPFACFICREPFLDPVVT GWQMEKEWEEAEKARKRNLALGMDDE-EVGGAGHDD-DDEDELPFACFICRENFVDPVMT GWQLEKDWDDAEKARKMRLAAGEDAV-EEGANVTDE-EDDDSLPFACFICRQPFVDPVVT GWQMEKEWDEAEKARKMRLATGEDAE-EEGASLNDEDDDEDALPFACFICRNPFVDPVST GWQMEKEWDEAEKARKMRLATGEDAE-EEGASLNDEDDDEDALPFACFICRNPFVDPVST GWQMEKEWEEAEKQRKMRLAAGEDADEEEGANLTDE-DDEDSLPFACFICRNSFVDPVVT GWQMEKEWEEAEKARKMRLAAGEDAD-EEGANLTDE-DDEDSLPFACFICRNTFVDPVVT GWQMEKEWEEAEKARKMRLAAGEDAD-EEGANLTDE-DDEDSLPFACFICRNTFVDPVVT
Pp~estExt_gwp_gw1.C_1140075 Zm~GRMZM2G373653_T01 Os~LOC_Os02g19804.1 Sb~estExt_Genewise1Plus.C_chr_42202 At~AT1G01350.1 At~AT5G06420.1 Pt~estExt_Genewise1_v1.C_LG_XIV1660 Lj~chr1.CM0088.900.nc Mt~AC126016_11.2 Mt~AC145329_30.2 Gm~Glyma03g02920.1 Gm~Glyma05g37520.1 Gm~Glyma05g37520.2	TCKHYFCEHCALKHHSRNKLCYVCNKPTNGVFNTAHEIVRKQKEAKQAAEGGD KCKHYFCEHCALKVRITSCMLSICRRSSPMILDKITF---------------- KCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDKKQ----- KCKHYFCEHCALKHHSKNKKCFVCLKPTLGIFNAAQEIRKKMAQDKKQQE--- KCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL KCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL KCKHYFCEHCALKHHAKNKKCFVCNEPTLGIFNAAHEIRKKMADAGKR----- KCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAEDNK------ KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDK------- KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDK------- KCKHYFCEHCALKHHSKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------ KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------ KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------	6: 372-372 estExt_gwp_gw1.C_1140075 1 0 U2 GTGCGTTC..GCAG LOC_Os02g19804.1 0 0 U2 GTATGCGG..TCAG estExt_Genewise1Plus.C_chr_42202 0 0 U2 GTATGAAT..TCAG AT1G01350.1 2 0 U2 GTATGATC..GCAG AT5G06420.1 1 0 U2 GTATGATC..GCAG estExt_Genewise1_v1.C_LG_XIV1660 2 0 U2 GTAGCCCC..ACAG chr1.CM0088.900.nc 0 0 U2 GTATACCC..GCAG AC126016_11.2 2 0 U2 GTACACCC..GCAG Glyma03g02920.1 2 0 U2 GTATAGAC..ACAG Glyma05g37520.1 2 0 U2 GTATAGGA..ACAG Glyma05g37520.2 2 0 U2 GTATAGGA..ACAG