SRGD Gene ID 554 BLASTp at NCBI n/a n/a  
OrganismsGm ,At ,Pt ,Mt ,Os ,Zm ,Pp ,Lj ,Sb
Gene count13
Cintron count8
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
------------------------------------------------------------
-----------------------------------------------------------M
-----------------------------------------------------------M
---------------------------------------------------------MAD
------------------------------------------------MSDSGEPKPSQQ
----------MEPFVVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMN
------------------------------------------------------------
------------------------------------MNKVCLLIAILCVNCHLFNFLVCF
MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFLFKLFT
MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFLFKLFT
----------------------------------------------------------ME
----------------------------------------------------------ME
----------------------------------------------------------ME
2: 0-0
AC145329_30.2 0 0 U2 ..
3: 56-56
AC126016_11.2 0 0 U2 GTCTCGTT..ACAG
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
--MEAPSEAGAAAAPAAGAFFKKKIQNKNIRKRPTI--DDGDEEEENAGSAVNKGKIAKK
ADGGNCGPGGGNASAPVCSFVRKP--PKNIRKRPAAP-AGSDDDDDGGGGALAAARSKKG
ADGGGGGEAGSGGSAPVCSFVRKP--PKNIRKRPTAP-AGSDDDDEDGSGAIAAARAKKA
GGSGSGEPGAGGGSAPVCSFVRKP--PKNMRKRPAAPAGSDDDDDGGGSGALAAARSKKG
EEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDA-DEEDGDSKSESSILQNLKKVAK
MAEFGNDNSNNQESQQVCTFFKKPTKSKNIRKRTIDA-DEEDGDSKSESSILQNLKKVAK
--MADPTEREPQQTEAVCNFFRKPMKNKNIRKRMID--EDEDEDSKTQTSLLHSQKKAPK
CSLYKYFCLFFLAFFSVCSFFRKPVNKKNIRKRTTDHQEDDEDDTNTETSLLHTQRKTFK
MEDSEAKSTENQQTEQVCSFFRKPVNRKNMRKRTIEN-EDNENDSNNEESLMHVQKKNTK
MEDSEAKSTENQQTEQVCSFFRKPVNRKNMRKRTIEN-EDNENDSNNEESLMHVQKKNTK
DSDQPAKSAENQQTEQVCSFFRKPVNKKNLRKRTIEI-EDNEEDSNNETSLLHIQKKTLK
DSDQPAKSAENQQTEQVCSFFRKPVNKKNIRKRTIVN-EDNEEDSNNETSLLHIQKKTLK
DSDQPAKSAENQQTEQVCSFFRKPVNKKNIRKRTIVN-EDNEEDSNNETSLLHIQKKTLK
4: 75-75
AT1G01350.1 1 1 U2 GTTACATA..TCAG
AT5G06420.1 0 1 U2 GTTACATA..TCAG
estExt_Genewise1_v1.C_LG_XIV1660 1 1 U2 GTACGCAT..GCAG
AC126016_11.2 1 1 U2 GTATGTAT..TCAG
Glyma03g02920.1 1 1 U2 GTATGTCT..TCAG
Glyma05g37520.1 1 1 U2 GTATGTCT..TCAG
Glyma05g37520.2 1 1 U2 GTATGTCT..TCAG
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
GVG----RLEFNSGAPVGTSKVQNSEESDKAGEVERATFVYESTRQVQTQDDSRATAVSE
PPSSTAGKLVFSTAG-------------ASSEAPR---FQYESSRTIQ-STDTRATATLE
PSSTS--KLFFSSA--------------DGSSEPRR--FQYESSRTIQASTDSRATATLE
PPSSAAGKLVFSTA--------------DASSEPRR--FQYESSRTIQ-STDSRATAVLE
PDS----KLYFSSGP------SKSST--TTSGAPERSVFHYDSSKEIQVQNDSGATATLE
PDS----NLYFSSGP---------ST--RTSGAPERPVFHYDSSKEIQVQNDSGATATLE
ADN----KLYFSTGP------LKKSS--ESNAEPERLLFQFESSKEIQVQHDSRATATLE
PDN----KLYFSTGS------TKPSTAAEPTQE-----FQFESSKEIQVQHDSKATATLE
ADN----KLFFSTGS------SKSSASAKPNEESEKPSFHFESSKEIQVQHDSKATATLE
ADN----KLFFSTGS------SKSSASAKPNEESEKPSFHFESSKEIQVQHDSKATATLE
ADN----KLYFSTGS------SKSSASAEPSEESGKTVFQFESSKEIQVQHDSKATAILE
PDN----KLYFSTGS------SKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLE
PDN----KLYFSTGS------SKSSASAEPSEEPGKPVFQFESSKEIQVQHDSKATATLE
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
IETEFDRDNRAIRERVLKQASEALKSGEPS---------NSKVYKGIHGYTDHKAGFRQE
TETEFDRDARSIRERQLKQAEESLKKNPSAVAASASASTAGEVYKGIHGYTDYKAGFRRE
TETEFDRDARAIRERQLKQAEESLKKNPSA-PASSSGSGSGEVYKGIHGYTDYKAGFRRE
TETEFDRDSRAIREKQLKQAEEFLKKNPSS---GASASASGEVYKGIHGYTDYKAGFRRE
TETDFNQDARAIRERVLKKADEALKGNKKK-------ASDEKLYKGIHGYTDHKAGFRRE
TETDFNQDARAIRERVLKKADHALKGNKKK-------ASDEKLYKGIHGYTDHKAGFRRE
TETEFSKDARAIRERALKQADDALKGKKMS-------SGDEKLYKGIHGYTDHKAGFRRE
TETDFSTDARAIRERALKQAATSLKGKAKT-------SEDDKLYKGINNYKDYKAGFRRE
TETDFSRDARAIRERALKQATESLKGKSTS-------SEDVKLYKGINNYTDHKAGFRRE
TETDFSRDARAIRERALKQATESLKGKSTS-------SEDVKLYKGINNYTDHKAGFRRE
TETEFSKDARAIRERALKQAEESLKGKSAS-------SEDKKLYKGMNSYKDYKAGFRRE
TETEFSKDARAIRERALKQAEESLKGKSPS-------SKNEKLYKGMNSYKDYKAGFRRE
TETEFSKDARAIRERALKQAEESLKGKSPS-------SKNEKLYKGMNSYKDYKAGFRRE
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
HTISREKAGGAHGPLRASAHIRMTVRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
HTVSSEKAGGSHGPLRASAHIRLSQRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
HTVSSEKAGGSHGPLRASAHIRLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
HTVSSEKAGGSHGPLRAAAHIRVSQRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP
QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP
QTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKS
5: 299-299
estExt_gwp_gw1.C_1140075 0 1 U2 GTAACAAT..ACAG
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
GWQMEREWDQEEKLRKQRLARGEADT-EEGEGAGDDSDDEDALPFACFICREPFTDPVVT
GWQLEKEYEEAEKARKRRIAMGGGGE-SDDEAADDE-DEEEALPFACFICREPFVDPVVT
GWQIEKEWEEAEKARKRRIAMGGDGS-DYEAGEEDDDDDEEALPFACYICREPFVDPVVT
GWQLEREHEEAQKARKRRIAMGGGDG-SDDEAADEDEDDEEALPFACYICRQPFVDPVVT
GWQIEKEWEEAEKVRKRNKAMGVEDE-DDEADKDSD-EDENALPFACFICREPFVDPVVT
GWQIEKEWEEAEKVRKRNKAMGVEDD-DDEADKDSD-EDENALPFACFICREPFLDPVVT
GWQMEKEWEEAEKARKRNLALGMDDE-EVGGAGHDD-DDEDELPFACFICRENFVDPVMT
GWQLEKDWDDAEKARKMRLAAGEDAV-EEGANVTDE-EDDDSLPFACFICRQPFVDPVVT
GWQMEKEWDEAEKARKMRLATGEDAE-EEGASLNDEDDDEDALPFACFICRNPFVDPVST
GWQMEKEWDEAEKARKMRLATGEDAE-EEGASLNDEDDDEDALPFACFICRNPFVDPVST
GWQMEKEWEEAEKQRKMRLAAGEDADEEEGANLTDE-DDEDSLPFACFICRNSFVDPVVT
GWQMEKEWEEAEKARKMRLAAGEDAD-EEGANLTDE-DDEDSLPFACFICRNTFVDPVVT
GWQMEKEWEEAEKARKMRLAAGEDAD-EEGANLTDE-DDEDSLPFACFICRNTFVDPVVT
Pp~estExt_gwp_gw1.C_1140075
Zm~GRMZM2G373653_T01
Os~LOC_Os02g19804.1
Sb~estExt_Genewise1Plus.C_chr_42202
At~AT1G01350.1
At~AT5G06420.1
Pt~estExt_Genewise1_v1.C_LG_XIV1660
Lj~chr1.CM0088.900.nc
Mt~AC126016_11.2
Mt~AC145329_30.2
Gm~Glyma03g02920.1
Gm~Glyma05g37520.1
Gm~Glyma05g37520.2
TCKHYFCEHCALKHHSRNKLCYVCNKPTNGVFNTAHEIVRKQKEAKQAAEGGD
KCKHYFCEHCALKVRITSCMLSICRRSSPMILDKITF----------------
KCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDKKQ-----
KCKHYFCEHCALKHHSKNKKCFVCLKPTLGIFNAAQEIRKKMAQDKKQQE---
KCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL
KCKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL
KCKHYFCEHCALKHHAKNKKCFVCNEPTLGIFNAAHEIRKKMADAGKR-----
KCKHYFCEHCALKHHAKNKKCFVCNQPTLGTFNVAQEIRKKMAEDNK------
KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDK-------
KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDK-------
KCKHYFCEHCALKHHSKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------
KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------
KCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKMAEDKS------
6: 372-372
estExt_gwp_gw1.C_1140075 1 0 U2 GTGCGTTC..GCAG
LOC_Os02g19804.1 0 0 U2 GTATGCGG..TCAG
estExt_Genewise1Plus.C_chr_42202 0 0 U2 GTATGAAT..TCAG
AT1G01350.1 2 0 U2 GTATGATC..GCAG
AT5G06420.1 1 0 U2 GTATGATC..GCAG
estExt_Genewise1_v1.C_LG_XIV1660 2 0 U2 GTAGCCCC..ACAG
chr1.CM0088.900.nc 0 0 U2 GTATACCC..GCAG
AC126016_11.2 2 0 U2 GTACACCC..GCAG
Glyma03g02920.1 2 0 U2 GTATAGAC..ACAG
Glyma05g37520.1 2 0 U2 GTATAGGA..ACAG
Glyma05g37520.2 2 0 U2 GTATAGGA..ACAG