SRGD Gene ID 549 BLASTp at NCBI n/a n/a  
OrganismsGm ,At ,Vv ,Os ,Zm ,Pp ,Lj ,Sb ,Pt
Gene count13
Cintron count18
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
-----MSLQDTEELKANLFTYKEQLKQVKELL---VVDSGNTEYQEMAIGLTEVLELTYD
-----MSLQDVEELKANLYSYKEQLQQVKELL---VVDPNNEEYQEMEKGLTEV-SISEK
-----MSLQDIEELKANLSTYKEQLQQVKELL---VLDPNNGEYQEMEKSLTEVLELTYD
-MVGGVEELSIEQLASSISTYKEQLEQVRQLL---SEDPRNSEYADMEKELKEVIALTEE
-----MEDLSVEELASNLSTYKEQLREVRKIIKEKNDDPGISEYLDMEKELQEVITLTEE
-----MEDLSVEELASNLSTYKEQLREVKKLIKEKKDDAGISEYIDMEKELQEVITLTEE
-----MEDLSVEELASNLSTYKEQLREVKKLIKEKKDDPGISEYIDMEKELQEVITLTEE
------------------------------------------------------------
MQGQGVDEVNIEELASNLSLYKDQLNQVRQLL---NDDPSNSEYADMERELSEVIALTEE
MQGQGVDEVSIEELASNLSLYKDQLNQVRELL---NDDPANSEYVDMERELSEVIALTEE
-------------------------MHITSIL-----------------VLVQVIALTEE
--MQGGEELSIDELASNLSTYKDQLQQVRKLL---VDDPGNSEYVDMEKELEEVIVLTEE
---MQGEEVSIEELASNLSTYKEQLHQVRQLL---VDDPGNSEYVDMEKELIEVIALTEE
2: 1-1
AT2G02570.1 0 0 U2 ..
3: 26-26
estExt_fgenesh1_pg.C_590212 0 0 U2 GTAAGTCG..GTAG
e_gw1.51.85.1 0 0 U2 GTAAGTGG..GCAG
e_gw1.79.70.1 0 0 U2 GTACGTGA..GCAG
LOC_Os08g01840.1 0 0 U2 GTCTCGCG..GCAG
estExt_Genewise1Plus.C_chr_70188 0 0 U2 GTCTCATC..TCAG
Glyma07g40240.1 0 0 U2 GTAAGTAA..TCAG
Glyma17g00560.1 0 0 U2 GTAACCAA..TCAG
eugene3.00860077 0 0 U2 GTACCTTT..CCAG
4: 52-52
estExt_fgenesh1_pg.C_590212 1 0 U2 GTAAGTAA..GCAG
e_gw1.79.70.1 1 0 U2 GTACGTAC..GCAG
LOC_Os08g01840.1 1 0 U2 GTGAGTAT..GCAG
estExt_Genewise1Plus.C_chr_70188 1 0 U2 GTGAGTTC..GCAG
Glyma07g40240.1 1 0 U2 GTAAGCTT..ACAG
Glyma17g00560.1 1 0 U2 GTAAGCTC..ACAG
Glyma17g00560.2 2 0 U2 GTCTGCTC..ACAG
eugene3.00860077 1 0 U2 GTGATCTT..GCAG
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
LLNEAQQAKEDAALELEQQEAAAANTHIHVDKELKMRTSGLRLEMIGNTNENFVHIPGRL
ALRGCDPC-----------ECWLDYANGGGQSVCGRLRDS--WKKLQQRQGYAVS-VGRL
LLNEAQQA-----------KEDATALEQEQEQIAATSTQRPPFHLSSTHTPLQVR-SLAL
VLATAKQN-----------EISLSDAGVSAEATPGSPDLEGAWEK-TGLRNDPIH-EGKF
LLATANQS-----------GNTQNDVGLSPPNYSSGLQSEALDDP------SQSH--EKF
ILATAKQT-----------ESAQNVAGLSPPSYSAGVQSEGLDDL--------SH-SHKF
ILATAKQT-----------ESAQNAAGLSPPNYSAGAQSEGLDDL--------SH-SHKF
------------------------------------------------------------
LLATAKQN-----------EIPAPPNAAAASPTLSIHNDNQVLDS------SSDH-QEKL
LLATAKQN-----------EISAPPNNAAASPTLSIHNENQLLDS------SSDH-QEKL
LLATAKQN-----------EISAPPNNAAASPTLSIHNENQLLDS------SSDH-QEKL
LLATAKQS-----------EISLPAFGTNADASPIQHQSGGSSEHLMEPGNNSDH-YGKF
LLETAKQN-----------EISGSHLGTGASASPGYAEPQEADQH------------EKF
5: 86-86
estExt_fgenesh1_pg.C_590212 2 1 U2 GTCCTCCG..CCAG
6: 99-101
LOC_Os08g01840.1 2 0 U2 GTAGCTCT..TTAG
estExt_Genewise1Plus.C_chr_70188 2 0 U2 GTAGCTTT..GCAG
Glyma07g40240.1 2 0 U2 GTACGTTC..ACAG
Glyma17g00560.1 2 0 U2 GTACGTCC..ACAG
Glyma17g00560.2 3 0 U2 GTACGTCC..ACAG
eugene3.00860077 2 0 U2 GTGAATAG..ACAG
7: 108-108
estExt_fgenesh1_pg.C_590212 3 0 U2 GTTACAAA..GCAG
8: 116-117
e_gw1.51.85.1 1 1 U2 GTAGATTA..CCAG
e_gw1.79.70.1 2 2 U2 GTATTTTT..ACAG
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
SVGTKVQAIWSEDGEWYKATVEAVTPGGYFVLYDEWGNKEEVDASNVRELNIPDDEVEVL
AVGTKVQAMWSEDGQWYKATVEAVTPGGYFVVYDEWGNKEEVCAE---------------
RVGTKVQAMWSGDGQWYKATVEAVTPGGYFVVYDEWGNKEEV------------------
PVGTKVQAVFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVR------------
AVGTKVQAVWSEDGEWYNATIEELTENGYYVSFEGWGNKEEVDPANVR------------
AVGTRVQAVWSEDGEWYNATVEALTPNGYYVAYDGWGNSEEVDPDNVR------------
AVGTRVQAVWSEDGEWYNATVEALTPNGYYVAYDGWGNREEVDPDNVR------------
-----------------------------------------VDPANIR------------
PVGTKVQAVWSEDGEWYDATVEAYTPNGYYVSYDNWGNKEEVDPANIR------------
PVGTKVQAVWSEDGEWYDATIEAYTPNGYYVSYDNWGNKEEVDPANVR------------
PVGTKVQAVWSEDGEWYDATIEAYTPNGYYVSYDNWGNKEEVDPANVR------------
PIGTKVQAVWSEDGEWYEATIDSLTPDGYYVSYDGWGNKEEVDPGNVR------------
PIGSKVQAVWSEDGEWYDATVEDLTPNGYYVTFDGWGNREEVDPDNVR------------
9: 134-134
estExt_fgenesh1_pg.C_590212 4 2 U2 GTAATTGA..GCAG
e_gw1.51.85.1 2 2 U2 GTAAGTGA..GCAG
e_gw1.79.70.1 3 2 U2 GTAATTGA..GCAG
LOC_Os08g01840.1 3 2 U2 GTAGGTTT..TCAG
estExt_Genewise1Plus.C_chr_70188 3 2 U2 GTGAGCTT..TCAG
Glyma07g40240.1 3 2 U2 GTATTGTT..CCAG
Glyma17g00560.1 3 2 U2 GTATTGTT..CCAG
Glyma17g00560.2 4 2 U2 GTATTGTT..CCAG
eugene3.00860077 3 2 U2 GTATGTGA..TCAG
10: 160-162
estExt_fgenesh1_pg.C_590212 5 0 U2 GTGTGTAT..GCAG
e_gw1.51.85.1 3 1 U2 GTTTTATC..GTAG
e_gw1.79.70.1 4 1 U2 GTGCTTTT..GCAG
LOC_Os08g01840.1 4 0 U2 GTATGCTC..ATAG
estExt_Genewise1Plus.C_chr_70188 4 0 U2 GTATGCTC..ATAG
Glyma07g40240.1 4 0 U2 GTAAGGCT..CCAG
Glyma17g00560.1 4 0 U2 GTAAGGCT..CCAG
Glyma17g00560.2 5 0 U2 GTAAGGCT..CCAG
eugene3.00860077 4 0 U2 GTATGGTT..CCAG
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
DQMLGGAEVVDNVNTNSWLDAEQEANLTRLALKKTIEDAADINVISRGVPPKLRIKPDDS
--------VVDDANVDPLLSAEQQANLTKLALKRKIEEAAKIDVISKDLPPKLRIKPDDS
---------LDEASVDPLLSAEQQANLTRLALKRKIEEAANVDVISKDLPPKLRIKPDDP
--------PIEQ---NAIVEAERLAQATKNALKRKIEKAASSDYQTKTLPAKLKIDPNDP
--------SLEEEAADALRQAEKEAEATKMAIKRKIEQAATSDFQMRSLPTKLRIDPNDP
--------LLEEEAADALGQAEKEAEATKMAIKRKIEQAATSDFQARSLPAKLRIEPSDP
--------LLEEEAADALRQAEKEAEATKMAIKRKIEQAATSDFQARSLPAKLRIEPSDP
--------LVQEGTVDALLEAERVAEATKQAIKRKISQAASVDFQSRSLPAKLRIEPDDP
--------SIQEGSVDALLEAERVAEATKQAIKRKIVQAASIDLQSRSLPAKLRIEADDP
--------SIQEGSVDALLEAERVAEATKQAIKRKIAQAASIDLQSRSLPTKLRIEADDP
--------SIQEGSVDALLEAERVAEATKQAIKRKIAQAASIDLQSRSLPTKLRIEADDP
--------PIQEE-VNALLEAEKEAEATKQAIKRKIAQAAATDFQSRSLPAKLRIEPDDP
--------PVE---FNALLEAEKVAEATKQAIKRKIAQAASVDFQSRTLPAKLRIEPDDS
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
EDVIAAKKKKIHAFKSKARLEQMELTQNKRQNAWQQFQTTKGKSKKQGGFFTGRKRESIF
EDVKAAKKKKIHAFKSKARLEQMELTQNKHQNAWQQFQTTKGKTKKQVGFFTGRKRESIF
EDVKAAKKKKIHAFKSKVRLEQMELTQNKNQNAWQQFQTTKGKSKKQVGFFTGRKRESIF
EDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQQFQTTKAKTKK-VGFFTGRKKESIF
EDVKATKRKKIHAFKSKARFEQLEFAQNKRQNAWQQFQTTKGKAKK-VGFFSGRKKESIF
EDVKAAKRKKIHAFKSKSRFEQLEFAQNKRQNAWQQFQ-TKGKAKK-VGFFSGRKKESIF
EDVKAAKRKKIHAFKSKARFEQLEFAQNKRQNAWQQFQ-TKGKSKK-VGFFSGRKKESIF
EDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQSTKGKTKK-VPF-------SIL
EDVKASKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQSTKGKAKK-IGFFSGRKRESIF
EDVKASKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQSTKGKAKK-IGFFSGRKRESIF
EDVKASKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQSTKGKAKK-IGFFSGRKRESIF
EDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQTTKGRAKK-IGFFSGRKRESIF
EDVKAAKRKKIHSFKSKMRFEQLEVAQNKRQNAWQQFQTTKGKTKK-VGFFSGRKRESIF
11: 242-242
estExt_fgenesh1_pg.C_590212 6 0 U2 GTGGGTGT..GCAG
e_gw1.51.85.1 4 0 U2 GTGCGTGC..GCAG
e_gw1.79.70.1 5 0 U2 GTACGTGA..GCAG
LOC_Os08g01840.1 5 0 U2 GTAAGTTA..GCAG
estExt_Genewise1Plus.C_chr_70188 5 0 U2 GTAAGTGA..GCAG
Glyma07g40240.1 5 0 U2 GTGAGTTG..ACAG
Glyma17g00560.1 5 0 U2 GTGAGTTG..ACAG
Glyma17g00560.2 6 0 U2 GTGAGTTG..ACAG
eugene3.00860077 5 0 U2 GTAAGTAG..ACAG
12: 285-285
estExt_fgenesh1_pg.C_590212 7 0 U2 GTAAGTGG..GCAG
e_gw1.51.85.1 5 0 U2 GTGAGTGA..GCAG
e_gw1.79.70.1 6 0 U2 GTACGTGC..GCAG
LOC_Os08g01840.1 6 0 U2 GTACTGTC..TCAG
estExt_Genewise1Plus.C_chr_70188 6 0 U2 GTAGCTTC..GCAG
Glyma07g40240.1 6 0 U2 GTACCTTT..ACAG
Glyma17g00560.1 6 0 U2 GTACCTTT..ACAG
Glyma17g00560.2 7 0 U2 GTACCTTT..ACAG
eugene3.00860077 6 0 U2 GTAAATAC..TCAG
Pp~estExt_fgenesh1_pg.C_590212
Pp~e_gw1.51.85.1
Pp~e_gw1.79.70.1
At~AT2G02570.1
Os~LOC_Os08g01840.1
Zm~GRMZM2G005737_T01
Sb~estExt_Genewise1Plus.C_chr_70188
Lj~LjSGA_024947.1
Gm~Glyma07g40240.1
Gm~Glyma17g00560.1
Gm~Glyma17g00560.2
Vv~GSVIVP00035349001
Pt~eugene3.00860077
KSPDDPKGKVGVTGSGKGTTEFHKREKHLHLKLGVGDGETYV--
KTPDDPKGKVGVTGSGKGTTEFHKREKHLHLKVGGVDGDDYE--
KTPDDPKGKVGVTGSGKGTTEFHKREKHLHLKLG-VDRDDYV--
KSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNAEGTDE---
KSPDDHRGKVGVTGSGKGLTEFQRREKHLHLKDGSSDALDEE--
KSPDDHRGKVGVTGSGKGLTDFQRREKHLHLKGGSGDAADDDEE
KSPDDHRGKVGVTGSGKGLTDFQRREKHLHLKGGSGDAADDEE-
LY---------------------------FIVSFML--------
KSPDDPQGKVGVTGSGKGLTEFQKREKHFHLKDGTVENDE----
KSPDDPQGKVGVTGSGKGLTEFQKREKHFHLKDGTVENDD----
KSPDDPQGKVGVTGSGKGLTEFQKREKHFHLKDGTVENDD----
KSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGGSADTDD----
KSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKDGSVEIDD----