SRGD Gene ID 546 BLASTp at NCBI n/a n/a  
OrganismsPt ,Vv ,Mt ,Os ,Gm ,Zm ,Pp ,Lj ,Sb ,At
Gene count13
Cintron count15
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc
MTTAARPTWAPAKGGSEQGGVRMFGPSQKFSSRDLASHTQLKLRKDGQDTTEEIRRRDLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQHTQEELQKRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTSLKPRKDGQQTQEELQKRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTSLKLRKDGQQTQEELQKRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTSLKLRKDGQQTQEELQKRNLR
MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQDTKEELLKRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTAEELQKRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTQDELKRRNLR
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRRDGQDTQDELKRRNLR
2: 0-0
AC138087_10.2 0 0 U2 ..
3: 42-42
fgenesh1_pg.scaffold_169000061 0 2 U2 GTACGCGG..TCAG
LOC_Os06g01700.1 0 2 U2 GTACTCTT..CCAG
estExt_Genewise1.C_chr_100100 0 2 U2 GTACATTC..GCAG
AT3G13200.1 0 2 U2 GTAAGATT..GCAG
eugene3.00012679 1 2 U2 GTAGGTCT..ACAG
GSVIVP00033426001 1 2 U2 GTAGTAGT..ACAG
AC183430_4.2 0 2 U2 GTAAGTTT..ATAG
Glyma17g15050.1 0 2 U2 GTATGATT..CCAG
chr4.CM0281.130.nc 0 2 U2 GTAACTAA..CCAG
Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc
AELEDREHRHFSSKEKSY-DDRDRRKGSTAGYLDGSKRDTEERSERAAIKNVDADDSDVE
DELEERERKHYSSKDKSYAEERDRRKSTS-LLLEGSRREAEDKIV---PREIDADDSDVE
MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTSLKPRKDGQQTQEELQKRNLR
EELEERERKHYSSKDKSYAE-RDRRKSSSQLLLEGSKREAEDKIV---PREIDADDSDVE
EELEERERKHYSSKDKSYAEERDRRKSSSQLLLEGSKREAEDKIV---PREIDADDSDVE
DELEERERRHFSSKDKSYNDDRDRRRGSQ-LLLEDSKRDPEERII---PRSVDADDSDVD
EELEERERRHFSSKDKSYNDDRDRRKGNH-LLLEGTKRDTEDRII---PRSVDADDSDVE
EELEERERRHFSSKDKTYGEDRDRRKGH--LLLEGVKRDADDRIV---PRSVDADDSDIE
DELDERERRHFSSKNKSYNDDRDHGRSGH-LFLEGTKRDIEDNII---PRSVDADDSDVE
DELDERERRHFSSKNKSYNDDRDHGRSGH-LFLEGTKRDIEDNII---PRSVDADDSDVE
DELEDRERRHFSSKNKSY-DDRDHGKGSH-LFLEGSKREMEDHIV---PRSVDADDSDVE
DELEERERRHFSSKNKSYSDDRDHGKSSH-LFLEGTKRDVEDHIV---ARSVDADDSDVE
4: 77-78
fgenesh1_pg.scaffold_169000061 1 1 U2 GTAATAGT..TCAG
LOC_Os06g01700.1 1 1 U2 GTACTAAC..GCAG
estExt_Genewise1.C_chr_100100 1 1 U2 GTATACCT..GCAG
AT3G13200.1 1 1 U2 GTAAGATA..TTAG
eugene3.00012679 2 1 U2 GTAATATA..GCAG
GSVIVP00033426001 2 1 U2 GTAGCGAG..GCAG
AC183430_4.2 1 1 U2 GTAAGTAC..ACAG
Glyma17g15050.1 1 1 U2 GTAAAGTT..GCAG
chr4.CM0281.130.nc 1 1 U2 GTAATATA..ACAG
5: 93-93
LOC_Os06g01700.1 2 1 U2 GTTTGTAC..ATAG
estExt_Genewise1.C_chr_100100 2 1 U2 GTTGTTGG..ATAG
AT3G13200.1 2 1 U2 GTTAGAGA..TTAG
eugene3.00012679 3 1 U2 GTGAGTTC..GCAG
GSVIVP00033426001 3 1 U2 GTAAATGC..ATAG
AC183430_4.2 2 1 U2 GTATTCTT..ACAG
Glyma17g15050.1 2 1 U2 GTATTCTA..ACAG
chr4.CM0281.130.nc 2 1 U2 GTACTAAA..ACAG
Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc
VPSD------------NDTAELLAELERIKKERAEEKLRKERQLQEEEMKAKESELIRGN
PRSD--DESDEDDDDDDDTEALMAELERIKKERAEENLRKERQQAEEEAKMKEAELMRGN
EELEERERKHYSSKDKSYSEERDRRKSSSQLLLEGSKREAEDKIV---PREIDADDSDVE
PKSD--DESD-EDGDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGN
PKSD--DESD-EDGDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGN
IKSDDDSDDESDDDDEDDTEALMAELDQIKKERVEERLRKEKEQQMEELNAKEEELLKGN
VNNDD-DSDDDDDDDEDDTEALMAELERIKKERAEEKLRQDQLQVAEELKAKEEQLLRGN
VKSDESDDDDDDDDDEDDTEALLAELEQIKKERAEEMLRMEREKQEEELKAKEAELIRGN
VNSD--DESD-DDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGN
VNSD--DESD-DDDDEDDTEALLAELEQIKKERAQEKLRKEQQQQEEDLKVKEAELMRGN
VKSD--DDSDDDEDDEDDTEALLAELEQIKKERTEEKLRKERQQQEEELKVKEAELLRGN
VKSD--EESDDDDDDEDDTEALLAELEQIKKERAEEKLRKVK------------------
6: 122-127
fgenesh1_pg.scaffold_169000061 2 1 U2 GTGATGAA..GAAG
LOC_Os06g01700.1 3 2 U2 GTCTGTCT..TCAG
estExt_Genewise1.C_chr_100100 3 2 U2 GTAGGTAT..TTAG
AT3G13200.1 3 2 U2 GTACCTTT..TTAG
eugene3.00012679 4 2 U2 GTCGCTAC..TTAG
GSVIVP00033426001 4 2 U2 GTATTACT..TTAG
AC183430_4.2 3 2 U2 GTTGATAA..TCAG
Glyma17g15050.1 3 2 U2 GTTGATAA..TCAG
chr4.CM0281.130.nc 3 2 U2 GTTGGTAA..TCAG
7: 153-153
estExt_Genewise1.C_chr_100100 4 0 U2 GTTTTCCT..GCAG
8: 159-159
fgenesh1_pg.scaffold_169000061 3 0 U2 GTCTTGTT..GCAG
LOC_Os06g01700.1 4 0 U2 GTTTGTTG..TCAG
AT3G13200.1 4 0 U2 GTAATATT..GCAG
eugene3.00012679 5 0 U2 GTAACTTC..GCAG
GSVIVP00033426001 5 0 U2 GTGAATTT..GCAG
AC183430_4.2 4 0 U2 GTAACATC..GCAG
Glyma17g15050.1 4 0 U2 GTCTTATT..TCAG
Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc
PL--LNSTG-SFAVKRRWDDDVVFKNQARGEPKPVKRFINDTIRNDFHRKFLNKYMK
PLININNAG-SFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMK
EELEERERKHYSSKDKSYAEERDRRKSSSQLLLEGSKREAEDKIV---PREIDADDSDVE
PLININNPG-SFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK
PLININNPG-SFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK
PL--LNTPT-SFSVKRRWDDDVVFKNQARGEMKAPKRFINDTIRNDFHRKFLHRYMK
PL--LNNTTTTFNVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLQKYMK
PL--LNNPT-SFNVKRRWDDDVVFKNQARGEAKTPKRFINDTIRNDFHRKFLQKYMK
PL--INNPT-SFSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK
PL--INNPT-SFSVKRRWDDDVVFKNQARGETKLAKRFINDTIRNDFHRKFLHKYMK
PL--LNNPTASFNVKRRWDDDVVFKNQARGETKTAKRFINDTIRNDFHRKFLQKYMK
----------LFLL------------------------------------FLSL---
9: 191-191
estExt_Genewise1.C_chr_100100 5 2 U2 GTAGGATG..GCAG
10: 195-195
fgenesh1_pg.scaffold_169000061 4 2 U2 GTATGTTA..GTAG
LOC_Os06g01700.1 5 2 U2 GTTTACAC..GCAG
AT3G13200.1 5 2 U2 GTTAGCAG..TCAG
eugene3.00012679 6 2 U2 GTTGGTGG..TCAG
GSVIVP00033426001 6 2 U2 GTTTGTGG..TCAG
AC183430_4.2 5 2 U2 GTTTGAAT..TTAG
Glyma17g15050.1 5 2 U2 GTTTGACT..TTAG
Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc


PKSD--DESDEDDDDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGN









Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc


PKSD--DESD-DDDDDDDTEALMAELERIKKERAEEKLRKERQQAEEEAKMKEAELMRGN









Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc


PLININNPG-SFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMKPLI









Pp~fgenesh1_pg.scaffold_169000061
Os~LOC_Os06g01700.1
Sb~estExt_Genewise1.C_chr_100100
Zm~GRMZM2G154278_T01
Zm~GRMZM2G154278_T02
At~AT3G13200.1
Pt~eugene3.00012679
Vv~GSVIVP00033426001
Mt~AC138087_10.2
Mt~AC183430_4.2
Gm~Glyma17g15050.1
Lj~chr4.CM0281.130.nc


NINNPS-SFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRSDFHRKFLQRYMK