SRGD Gene ID 545 BLASTp at NCBI n/a n/a  
OrganismsAt ,Os ,Pp ,Vv ,Lj ,Pt ,Gm ,Mt ,Sb ,Zm
Gene count13
Cintron count5
Cintron classesU2 ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.142.63.1
Pp~estExt_fgenesh1_pg.C_460132
Zm~GRMZM2G092429_T02
Sb~estExt_Genewise1.C_chr_65346
Os~LOC_Os04g36810.1
Mt~AC156828_37.2
Mt~AC174289_29.2
Lj~chr6.CM0420.220.nd
At~AT3G14080.1
Gm~Glyma07g04580.1
Vv~GSVIVP00034053001
Pt~estExt_Genewise1_v1.C_1580060
Pt~estExt_fgenesh4_pm.C_LG_III0051
-MSWAGLDN-FPATSLADNLDKKLLVILRDGKKIIGILRSFDQFANVVLEGALERITVGE
-MSWSGPDN-FPATSLADNLDKKLLVILRDGRKLIGVLRSFDQFANVVLEGALERITVGE
-MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGE
-MSWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGE
MSSWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGE
-MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGD
-MSWAAPDELLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGD
-MSWASPDDVLLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGD
-MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGE
-MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGD
-MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGD
-MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGD
-MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGD
2: 20-20
e_gw1.142.63.1 0 1 U2 GTGAGTAT..ACAG
estExt_fgenesh1_pg.C_460132 0 1 U2 GTGAGTTC..GCAG
estExt_Genewise1.C_chr_65346 0 1 U2 GTGAGTTT..TCAG
LOC_Os04g36810.1 0 1 U2 GTGAGGCT..CCAG
AC156828_37.2 0 1 U2 GTAATATC..GCAG
chr6.CM0420.220.nd 0 1 U2 GTAATCTC..ACAG
AT3G14080.1 1 1 U2 GTAAATCC..GCAG
Glyma07g04580.1 0 1 U2 GTGAGCCC..GTAG
GSVIVP00034053001 0 1 U2 GTAAGTTC..GCAG
estExt_Genewise1_v1.C_1580060 0 1 U2 GTAAGTTC..TCAG
estExt_fgenesh4_pm.C_LG_III0051 0 1 U2 GTAAGCTC..TCAG
3: 43-43
e_gw1.142.63.1 1 1 U2 GTACGTAT..ACAG
estExt_fgenesh1_pg.C_460132 1 1 U2 GTATGGGT..ACAG
estExt_Genewise1.C_chr_65346 1 1 U2 GTATGCAC..GCAG
LOC_Os04g36810.1 1 1 U2 GTATGCCA..GCAG
AC156828_37.2 1 1 U2 GTAACTAC..ACAG
chr6.CM0420.220.nd 1 1 U2 GTAATTAT..ACAG
AT3G14080.1 2 1 U2 GTATTCAC..ACAG
Glyma07g04580.1 1 1 U2 GTAACAAC..GCAG
GSVIVP00034053001 1 1 U2 GTACTTTG..ACAG
estExt_Genewise1_v1.C_1580060 1 1 U2 GTAAATTT..GCAG
estExt_fgenesh4_pm.C_LG_III0051 1 1 U2 GTAAATTT..GCAG
Pp~e_gw1.142.63.1
Pp~estExt_fgenesh1_pg.C_460132
Zm~GRMZM2G092429_T02
Sb~estExt_Genewise1.C_chr_65346
Os~LOC_Os04g36810.1
Mt~AC156828_37.2
Mt~AC174289_29.2
Lj~chr6.CM0420.220.nd
At~AT3G14080.1
Gm~Glyma07g04580.1
Vv~GSVIVP00034053001
Pt~estExt_Genewise1_v1.C_1580060
Pt~estExt_fgenesh4_pm.C_LG_III0051
LYCDLPLGLYIIRGENVVLIGEL-DLGREELPSFMVRVTPTEIKQAQKAEKDATELKGTM
LYCDLPLGLYIIRGENVVLIGEL-DLEREELPSFMVRVTPTEIKQAQKAEKDATELKGTM
QYCDVPLGLYVIRGENVVLIGEL-DREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTM
QYCDVPLGLYVIRGENVVLIGEL-DREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTM
LYCDVPLGLYVIRGENVVLIGEL-DREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSM
LYCDVPLGLYVIRGENVVLIGEL-DLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTM
LYCDVPLGLYVIRGENVVLIGEL-DLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTM
LYCDVPLGLYVIRGENVVLIGELVDSGKEELPQHMTCVSEVDIRKAQKAERDASDLKGTM
QYCDIPLGLYVIRGENVVLIGEL-DTEREELPPHMIRVSEAEIKRAQKVEREASELRGTM
LYCDIPLGLYVIRGENVVLIGEL-DLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTM
LYCDIPLGLYVIRGENVVLIGEL-DLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTM
LYCDIHLGLYVIRGENVVLIGEL-DLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTM
LYCDIHLGLYVIRGENVVLIGEL-DLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTM
4: 82-83
e_gw1.142.63.1 2 0 U2 GTGAGCTT..ATAG
estExt_fgenesh1_pg.C_460132 2 0 U2 GTAAGATT..ACAG
estExt_Genewise1.C_chr_65346 2 0 U2 GTAATAAC..GCAG
LOC_Os04g36810.1 2 0 U2 GTAATGAT..GCAG
AC156828_37.2 2 0 U2 GTATGACA..TTAG
chr6.CM0420.220.nd 2 0 U2 TGATGTGT..ATAG
AT3G14080.1 3 0 U2 GTAAGACT..TTAG
Glyma07g04580.1 2 0 U2 GTAAGATT..TTAG
GSVIVP00034053001 2 0 U2 GTATGATA..TTAG
estExt_Genewise1_v1.C_1580060 2 0 U2 GTATGATG..CTAG
estExt_fgenesh4_pm.C_LG_III0051 2 0 U2 GTACAATT..TCAG
5: 104-104
e_gw1.142.63.1 3 0 U2 GTAATCCT..TCAG
estExt_fgenesh1_pg.C_460132 3 0 U2 GTAAGCTC..ACAG
estExt_Genewise1.C_chr_65346 3 0 U2 GTATTCAC..CCAG
LOC_Os04g36810.1 3 0 U2 GTACACAG..ACAG
AC156828_37.2 3 0 U2 GTGAGTTC..TCAG
chr6.CM0420.220.nd 3 0 U2 GTTAGTCC..TCAG
AT3G14080.1 4 0 U2 GTAAGACA..GCAG
Glyma07g04580.1 3 0 U2 GTAAATAT..GTAG
GSVIVP00034053001 3 0 U2 GTAACTGC..GCAG
estExt_Genewise1_v1.C_1580060 3 0 U2 GTAAGTTT..GCAG
estExt_fgenesh4_pm.C_LG_III0051 3 0 U2 GTAAGTGT..GCAG
Pp~e_gw1.142.63.1
Pp~estExt_fgenesh1_pg.C_460132
Zm~GRMZM2G092429_T02
Sb~estExt_Genewise1.C_chr_65346
Os~LOC_Os04g36810.1
Mt~AC156828_37.2
Mt~AC174289_29.2
Lj~chr6.CM0420.220.nd
At~AT3G14080.1
Gm~Glyma07g04580.1
Vv~GSVIVP00034053001
Pt~estExt_Genewise1_v1.C_1580060
Pt~estExt_fgenesh4_pm.C_LG_III0051
RKRMEFLDLE
RKRMEFLDID
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDFD
RKRMEFLDLD
RKRMEFLDLD
RKRMEFLDLD