SRGD Gene ID 544 BLASTp at NCBI n/a n/a  
OrganismsLj ,Mt ,Zm ,Gm ,Os ,Sb ,Pt ,At ,Vv
Gene count13
Cintron count3
Cintron classesU2 ,absent ,im
Home (Search) Bookmark for this page        Download data


Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
-------------------MAAVAFRSLLHPAAAALT-ERVPLPPAHLRLQGL-----HR
----------------MATAAAAVTATFRTLIQHAAA-CGAPVPLPSVRFQSL-----QR
----------------MATAAAAVTATFRTLIQHAAA-CGAPVPLPSVRFQSL-----QR
-------------------MAAAVTATFRTLLQHAAA-GGVPVPLPSVRFQSL-----QR
-------------MSSAYCSSAVAVSAAATASSAATF-NPLLSSHSNSQLFYR------F
----------------MASTTSVSSSICNRIYNLSFK-HS-SLALT-CNFSQR-----PI
-------------------MAAVSSSICNRIYNLSFT-HP-SLSLTTCNFRQR-----PI
----------------MAATASVSSSICNRIYNLSFT-HP-SLSLTSSNFPQR-----PV
----------------MAGASTGSFPIYHRLFNLSFT-THSSISHITLNFPHRTTTTTTI
----------------MAATATPSFPICKQLY----F-TPSSIPLT-LNIPHR-----PK
MMGHRKATPKPKSNLQPYPSFFPDHSSFIQAFLLQFFLHPTSMSASSLNMAAAAAAAAAS
------------------------------------------------------------
-----------MSAFSVAASTITSSPLHTKLSKLSFT-HSQLLIPS------------YF
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
HRVGVLNLFVASGHRRRILLP--LAAAGGEFSSEEEEYANEEEE-EGEEYVEEEEEDGEE
HRVGL-RRFAPPRGRPVLPPP--FAA--EDFSSYVDDFSGDDGE----EHFDEEEGSEPE
HRVGL-RRFAPPRGRPVLPPP--FAA--EDFSSYVDDFSGDDGE----EHFDEEEGSEPE
HRVGL-RLLAPPRGRPVLLPP--VAA-----AAAGEEFSSDGEDSTGDEYFDEEEASESE
TPKSF--KLVANCPNPLILHS--NIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGD
SQKAFNLNLKFQSF-ILSPLS--LHRLHPPSAS-TDEFEVAQDS-TDSRQDNPEPEPETE
SQKPFTLNLKSQSF-TLSFFP--LHRLPPPSAA-FDGFEVAQDT-TEFQQDEPETEP---
SQKPLSLNLESQSF-ALSFLP--LHRLPPPFAA-FDGLEVAQDT-TESQQDEPEPET---
SSKPF--NLISQLFNPLHPPP---------------SFSFYEEE---QQFFESESESESE
PPKPL--NLKPKLFSP-SSLS--LYRFHLPSVS-FHGFQETEEE--------PESET---
SSPSLRIPYRISKL-SLIPISTHFPSIPKPLKLTTQSAHFPHHLCRTTQHQDPQLQEEEE
--------------NSLSLLS--LPHFHGIFAASSDSFESGTEE-NTTALDDPQSETDEF
LSKPFLKPLKPLKLNSQNSNS--LPHSHGTFAATFDNFEVETDE-NIAAQDDPQSETDEF
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
EEAAAVAAPRGYYPPRSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYD
EEAEAPRA---YSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYD
EEAEAPRA---YSSPRSRPPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYD
EEAEAPRA---YSPPRSRPTRGDDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYD
EGEEEVEE------EKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYD
TSDKPQQE------EEQKVSTSSDDRRLYVGNLPYSMTSSQLTEIFVEAGTVVSVEVMYD
-VEKTEQE------EEQKVSDSYDAGRLYVGNLPYSITNSALAELFGEAGTVASVEIMYD
-VEKTEQE------EEQKVSDSNDAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYD
SESETETE-TLLNSDLNQEAESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYD
-----------FQNSEPKVSHSNQSRRLFVGNLPYSLSSSQLAQLFGEAGDVVSVEVVCD
EEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYD
DQEIVEEE------GDVEAIKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYD
DQEIVEEE---EEEEDVVAIKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICD
1: 175-175
LOC_Os07g06450.1 0 0 U2 GTTTCCAT..GCAG
GRMZM2G026614_T01 0 0 U2 GTACCCGT..GAAG
GRMZM2G026614_T03 0 0 U2 GTACCCGT..GAAG
Sb02g003310 0 0 U2 GTACCCGT..GCAG
AT3G52380.1 0 0 U2 GTTCGTCT..GTAG
chr1.CM0361.390.nc 0 0 U2 GTTTCTTC..GTAG
Glyma03g36130.1 0 0 U2 GTTTCTTC..GTAG
Glyma19g38790.1 0 0 U2 GTTTCTTC..GTAG
AC202362_16.1 0 0 U2 GTTTTCTT..GCAG
chr5.CM0571.170.nd 0 0 U2 TCCCTAAG..CTGC
eugene3.00160616 0 0 U2 GTCTGACT..TAAG
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
KVTDRSRGFAFVTMATAEEAATAIQMFNGA------------------------------
KVTNRSRGFAFVTMATAEEAAKAIQMFDGA------------------------------
KVTNRSRGFAFVTMATAEEAAKAIQMFDGAVSTAPANWISTSTPHRIGILLLPMNVQACV
KVTNRSRGFAFVTMATAEEAAKAIQMFDGA------------------------------
KVTDRSRGFGFVTMGSIEEAKEAMQMFNSS------------------------------
RVTDRSRGFAFVTMGSVDDAKEAIRMFDGS------------------------------
RVTDRSRGFAFVTMGNVEDAKEAIRMFDGS------------------------------
RVTDRSRGFAFVTMGSVEDAKEAIRMFDGS------------------------------
DITNRSRGFAFVTMGNVEDAEEAIRMFDGT------------------------------
DFTDRSRGFAFVTMGSVENAEQAIQMFDGT------------------------------
RVTDRSRGFAFVTMGSVQEAKEAIRMFDGS------------------------------
RVTDRSRGFGFVTMGSVEEAKKAIQMFNGT------------------------------
RVTDRSRGFGFVTMESVEEAKEAIRMFNGS------------------------------
2: 209-209
LOC_Os07g06450.1 1 0 U2 GTGAGTTT..GTAG
GRMZM2G026614_T01 1 0 U2 GTAAGTAC..GCAG
Sb02g003310 1 0 U2 GTAAGTAC..GCAG
AT3G52380.1 1 0 U2 GTAAGTTC..GTAG
chr1.CM0361.390.nc 1 0 U2 GTAAGTCT..TCAG
Glyma03g36130.1 1 0 U2 GTAAGTCT..ACAG
Glyma19g38790.1 1 0 U2 GTAAGTCT..ACAG
AC202362_16.1 1 0 U2 GTAAGTCT..ACAG
chr5.CM0571.170.nd 1 0 U2 CCTTCTTC..TTGA
eugene3.00160616 1 0 U2 GTAAGTGA..ACAG
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
--------------LLGGRTARVNYPEVPRGGERAV-GSAAATRENRRDDGTFKIYAGNL
--------------LLGGRTARVNYPEVPRGGERRTVTM----SGRRRDDGTYKIYAGNL
LTSDRSLAHSSPMQLLGGRTARVNYPEVPRGGERRTVTM----SGRRRDDGTYKIYAGNL
--------------LLGGRTARVNYPEVPRGGERRTVTM----AGRRRDDGTYKIYAGNL
--------------QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNL
--------------QVGGRIVRVNFPEVPKGGERLVMGPKIRNNNRDFVDSSHKIYAGNL
--------------QVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNL
--------------QVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYAGNL
--------------TVGGRAIKVNFPEVPIVGKRVQMGS----TYRGYVDSPHKIYAGNL
--------------QVGGRNIKVNFPEVPKGGKKRMTGS----NYSVYVDSPHKIYAGNL
--------------QVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNL
--------------QFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYAGNL
--------------QVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNL
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
GWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELE
GWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELE
GWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELE
GWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELE
GWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVE
GWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQ
GWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQ
GWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQ
GWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQ
GWGLASQGLRDAFAEQPGFLSAKVIYERNNGKSRGFGFVSFETAKDVEAALNAMNGVEVQ
SWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVE
GWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVE
GWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVD
3: 356-356
LOC_Os07g06450.1 2 0 U2 GTATGTGT..GCAG
GRMZM2G026614_T01 2 0 U2 GTATGTTC..GCAG
GRMZM2G026614_T03 1 0 U2 GTATGTTC..GCAG
Sb02g003310 2 0 U2 GTATGTTC..GCAG
AT3G52380.1 2 0 U2 GTAAGGCT..TTAG
chr1.CM0361.390.nc 2 0 U2 GTAAGAAC..TCAG
Glyma03g36130.1 2 0 U2 GTAAGAAC..TCAG
Glyma19g38790.1 2 0 U2 GTAAGAAC..TCAG
AC202362_16.1 2 0 U2 GTATGAAT..TCAG
chr5.CM0571.170.nd 2 0 U2 TTAGTCTT..CTAA
eugene3.00160616 2 0 U2 GTAAGACC..ATAG
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
GRPLRLSMAEQNPTAGS-PSTVQSQEEETASES-SDAETEQSITSEPSEAETEESNLQTA
GRSLRLSLAEQNPPPGSPPSTAQAQQEETDSGAPAGGGTEAASSSEPSEAEVGESNLQTA
GRSLRLSLAEQNPPPGSPPSTAQAQQEETDSGAPAGGGTEAASSSEPSEAEVGESNLQTA
GRPLRLSLAEQNPPPGSPPSNAQAQQEETDSGA-SDAETEVVSSSELSEAELDENNLQTA
GRALRLNLASEREKPTVSPPSVEEGETE--------------------EASLESNEVLSN
GRELRLNLAAVKAPSS--PSVTEENE----------------------GSSVDTSELVSS
GRPLRLNLAEARAPSS--PPVIQKNV----------------------GSNVESSELVSS
GRPLRLNLAEARTPSS--PPVIQKNV----------------------GSNVESSELVSS
GRPLRLKLAVDNRK----PSSLDQNK----------------------GNNVDSLEMLFG
GRPLRLNLAADKKPIS--PFVIDEME----------------------ESNVDRLEILFG
GRPLRLNLAAVRAPP---APSPGPGL----------------------ERNVDNSELISS
GRPMRLNLAGERSPP---PSAKENNT----------------------ENNLESGELLSS
GRPLRLNLAGERSYP---PPAKENNT----------------------EDNLESSELLSS
Os~LOC_Os07g06450.1
Zm~GRMZM2G026614_T01
Zm~GRMZM2G026614_T03
Sb~Sb02g003310
At~AT3G52380.1
Lj~chr1.CM0361.390.nc
Gm~Glyma03g36130.1
Gm~Glyma19g38790.1
Mt~AC202362_16.1
Lj~chr5.CM0571.170.nd
Vv~GSVIVP00003533001
Pt~gw1.VI.797.1
Pt~eugene3.00160616
ASY
ANY
ANY
ATY
VSA
AST
AST
AST
ISK
VST
IST
---
IGA