SRGD Gene ID 540 BLASTp at NCBI n/a n/a  
OrganismsAt ,Mt ,Zm ,Os ,Sb ,Gm ,Pt ,Pp ,Lj
Gene count13
Cintron count9
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.219.49.1
Pp~estExt_Genewise1.C_460191
At~AT4G30220.1
Pt~eugene3.00180816
Mt~AC135801_11.2
Lj~chr5.CM0852.120.nd
Gm~Glyma20g21250.1
Gm~Glyma17g07060.1
Sb~e_gw1.3.1801.1
Sb~estExt_Genewise1Plus.C_chr_41141
Zm~GRMZM2G058252_T01
Zm~GRMZM2G168252_T01
Os~LOC_Os11g43620.1
-------TVPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDGA
-----MATIPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDGA
--------------------------------MEYKGFLASVDSYMNLQLGNTEEYIDGQ
-----MATVPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQ
-----MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGN
-------TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQ
-----MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQ
-----MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQ
MDSCFVQTVPVNPKPFLNNLTGKTVIVKLKWGMEYKGYLTSVDSYMNLQLANTEEYIDGQ
-----MATVPVNPKPFLNNLTGKFVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQ
-----MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQ
-----MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQ
-----MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQ
2: 5-6
estExt_Genewise1.C_460191 0 0 U2 GTAAGACG..GCAG
eugene3.00180816 0 0 U2 GTGAGTTT..GCAG
AC135801_11.2 0 0 U2 ..
Glyma20g21250.1 0 0 U2 GTGAGTAC..GCAG
Glyma17g07060.1 0 0 U2 GTGAGTAC..GCAG
estExt_Genewise1Plus.C_chr_41141 0 0 U2 GTAAGCTT..GCAG
GRMZM2G058252_T01 0 0 U2 GTAAGCTA..GCAG
GRMZM2G168252_T01 0 0 U2 GTACGCTC..GCAG
LOC_Os11g43620.1 0 0 U2 GTAATACC..GCAG
3: 32-32
AT4G30220.1 0 0 U2 ..
4: 35-35
e_gw1.219.49.1 0 1 U2 GTGCTCTG..GCAG
estExt_Genewise1.C_460191 1 1 U2 GTGCTCTG..ACAG
eugene3.00180816 1 1 U2 GTCAAGAT..TCAG
Glyma20g21250.1 1 1 U2 GTATGACT..TCAG
Glyma17g07060.1 1 1 U2 GTATGAGT..TCAG
e_gw1.3.1801.1 0 1 U2 GTAAATTT..CCAG
estExt_Genewise1Plus.C_chr_41141 1 1 U2 GTAATTTA..CCAG
GRMZM2G058252_T01 1 1 U2 GTAAGTTA..CCAG
GRMZM2G168252_T01 1 1 U2 GTAATTTA..CCAG
LOC_Os11g43620.1 1 1 U2 GTAATCTA..TAAG
5: 48-48
e_gw1.219.49.1 1 0 U2 GTTAGTAT..ACAG
estExt_Genewise1.C_460191 2 0 U2 GTAAGTAT..CCAG
eugene3.00180816 2 0 U2 GTACTGTC..ACAG
Glyma20g21250.1 2 0 U2 GTTATATA..GTAG
Glyma17g07060.1 2 0 U2 GTATATAT..GTAG
e_gw1.3.1801.1 1 0 U2 GTACTACT..GCAG
estExt_Genewise1Plus.C_chr_41141 2 0 U2 GTACTAAT..GCAG
GRMZM2G058252_T01 2 0 U2 GTACTAAT..GCAG
GRMZM2G168252_T01 2 0 U2 GTACTAAT..GCAG
LOC_Os11g43620.1 2 0 U2 GTATTGTT..TCAG
Pp~e_gw1.219.49.1
Pp~estExt_Genewise1.C_460191
At~AT4G30220.1
Pt~eugene3.00180816
Mt~AC135801_11.2
Lj~chr5.CM0852.120.nd
Gm~Glyma20g21250.1
Gm~Glyma17g07060.1
Sb~e_gw1.3.1801.1
Sb~estExt_Genewise1Plus.C_chr_41141
Zm~GRMZM2G058252_T01
Zm~GRMZM2G168252_T01
Os~LOC_Os11g43620.1
FTGNLGEVLIRCNNVMYLRGVPEDEDAAEDDE-
FTGNLGEVLIRCNNVMYLRGVPEDEDAAEDDD-
LTGNLGEILIRCNNVLYVRGVPEDEELEDADQD
FTGNLGEILIRCNNVLYLRGVPEDEDIEDAERD
FTGNLGEILIRCNNVLYMRGVPEDEEIEDAADD
FTGNLGEILIRCNNVLYLRGVPEDEEIEDAPE-
FTGNLGEILIRCNNVLYLRGVPEDEEIEDVAED
FTGNLGEILIRCNNVLYLRGVPEDEEIEDAAED
FSGNLGEILIRCNNVLYLRGVPEDTEIEDAE--
FSGNLGEILIRCNNVLYLRGVPEDAEIQDAE--
FSGNLGEILIRCNNVMYLRGVPEDAEIEDAE--
FSGNLGEILIRCNNVMYLRGVPEDAEIEDAE--
FSGNLGEILIRCNNVLYLRGVPEDAEIEDAE--
6: 69-69
e_gw1.219.49.1 2 2 U2 GTCCGTCT..GTAG
estExt_Genewise1.C_460191 3 2 U2 GTTCGTCT..GCAG
eugene3.00180816 3 2 U2 GTAAGTTG..GCAG
chr5.CM0852.120.nd 0 2 U2 GTAACTTG..ATAG
Glyma20g21250.1 3 2 U2 GTAAATTC..CTAG
Glyma17g07060.1 3 2 U2 GTATACTC..CTAG
e_gw1.3.1801.1 2 2 U2 GTAATGAT..ACAG
estExt_Genewise1Plus.C_chr_41141 3 2 U2 GTAATGTT..ACAG
GRMZM2G058252_T01 3 2 U2 GTAATGTT..ACAG
GRMZM2G168252_T01 3 2 U2 GTAATGTT..ACAG
LOC_Os11g43620.1 3 2 U2 GTAACTCG..ACAG