SRGD Gene ID 480 BLASTp at NCBI n/a n/a  
OrganismsAt ,Vv ,Os ,Gm ,Zm ,Pp ,Lj ,Sb ,Pt
Gene count14
Cintron count7
Cintron classesU2 ,im ,em ,U12 ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
----MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIA-----------
MAAAATNADVEVVDFDLDDDDLMDEDAGP----DPAPP-PASRLRSTIA-----------
-MAAVTNADVEVVDFDLDDDDLMDEDAGP--DPAPAPA-PASRLRSTIA-----------
-MAAVMNADVEVVDFDLDDDDLMDEDAGP----DPAPA-PTSRLRSTIA-----------
-MAAVTNADVEAVDFDPDDDDLMDEDAA-----DPTPA-PAPRLRSTIA---------GG
-----------------MDDDALE----------AYPA-SAPRLRSTIA-----------
---MTTAEVVDAVDFEPEEDDLLDEDVAM--EDLETPAAPAPKLRSTIS-TGGAGGGSRV
---MTTAEVVDAVDFEPEEDDLLDEDVAM--EELDAPPAPPPKLKSTIITSGTGGGSRMG
-MQGGGAAEGEALDFEPEDDDLMDEDGAP--DADASP--PHPKLKSAIT-----------
--MQGSAADGEALDFEPEDDDLMDEDGAP--DADASP--PQPKLKSAIT-----------
--MQGSAADGEALDFEPEDDDLMDEDGAPDADADASP--PQPKLKSAIT-----------
----MASADVEAVDFEPEDDDLMDEDGAVDVD-NSSPRAPLPKLKSAIT-----------
----MANTEAEAVDFEPEEDDLMDEDGAADADASSSPRAPLPKLKSAIT-----------
----MANTEAEAVDFEPEDDDLMDEDGAVDVDASSSPRAPLPKLKSAIT-----------
2: 4-4
AT1G51510.1 0 0 U2 ..
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
----GANGESAKKTKGRGFREE--KDSDRQRRLSS----RDFESLGSDGRPGPQRSVEGW
------GDDAPRRTKGRGFREDPNSSATRDSRFGA----GGRADLDSLGGPGPIQSIEGW
------GDDAPRRTKGRGFREDPNSSAHRDSRFGA----GGRADLDSLGGPGPIQSIEGW
------GDDAPRRTKGRGFREDPNSSAPRDSRFGA----GGRADLDSLGGPGPIQSIEGW
GGGGGGGDDGQRKTKGRGFRDD---AAPRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGW
--ASGDSSAAARKTKGRGFREEPSSSRPLAGR-------SDFDSLGSDYGPGPL-TIEGW
GGGGSAAAVDGRKTKGRGFRDE--ADADRSHRYTE----KEFESLDGSGGPGPQRSVEGW
GGAAAAAAAAGRKTKGRGFREE--GDADRSHRYAV----KEFESLDSGGGPGPQRSVEGW
-SGAAPSLSAPKKTKGRGFRQE--TDTNRNNRLSG----SDFDSLTTEGGPGPQRSIEGW
------AAAAPKKTKGRGFRQD--TDANRDTRLSG----SDFDSLTTEGGPGPQRSIEGW
-PAATSSLSAPKKTKGRGFRQD--TDANRNTRLSG----TDFDSLTAEGGPGPQRSIEGW
GGAPSSLAAAPKKTKGRGFRDD--TDADRNSRFAA----RDFDSLDSDGGPGPQRSIEGW
GGSASSSLSAPKKTKGRGFREE--VDAERQSRLSG----RGFDSLGSDGGPGPQRSVEGW
GGSASPSLSAPKKTKGRGFREE--VDTERQSRFSG----RGFDSLGSDGGPGPQRSVEGW
3: 113-114
estExt_fgenesh1_pm.C_chr_90084 0 1 U2 GTACAGTC..GCAG
LOC_Os05g04850.1 0 1 U2 GTACGTCT..ACAG
estExt_Genewise1.C_chr_33529 0 1 U2 GTGTAAGA..GCAG
e_gw1.31.212.1 0 1 U2 GTATCCTC..CCAG
e_gw1.136.78.1 0 1 U12 GTATCCTC..CTAG
chr2.CM0018.160.nd 0 1 U2 GTTAGTTT..GCAG
Glyma01g43710.1 0 1 U2 GTTAGTAA..CCAG
Glyma11g01770.1 0 1 U2 GTTAGTAA..CCAG
GSVIVP00034829001 0 1 U2 GTCAGTGC..ACAG
gw1.I.755.1 0 1 U2 GTCAGTGA..ACAG
gw1.IX.3616.1 0 1 U2 GTGAGTGA..GCAG
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
IILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISA
IVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKE
IVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKE
IVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKE
IVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKA
IILVTGIHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALVEYESFDEAQAAIKA
IILVTGVHEEAQEDDLHESFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQGAIDN
IILVTGVHEEAQEDDLHEAFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQAAIDN
IILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYERAEEAKNAIEN
IILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYERAEEARNAIEN
IILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYERAEEARNAIEN
IILVTGVHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVKGYALIEYENLEEAQAAISA
IILVSGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYEKFEQAENAIAS
IILVSGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEQAENAIAS
4: 160-160
estExt_fgenesh1_pm.C_chr_90084 1 0 U2 GTCTGTTT..ACAG
LOC_Os05g04850.1 1 0 U2 GTTTGTCT..CCAG
estExt_Genewise1.C_chr_33529 1 0 U2 GTAAGTAT..GCAG
e_gw1.31.212.1 1 0 U2 GTGTAACT..GCAG
e_gw1.136.78.1 1 0 U2 GTTTGATT..GCAG
chr2.CM0018.160.nd 1 0 U2 GTAAGTGA..TTAG
Glyma01g43710.1 1 0 U2 GTAACTCT..TTAG
Glyma11g01770.1 1 0 U2 GTATCTCT..TTAG
GSVIVP00034829001 1 0 U2 GTGAGCAA..CAAG
gw1.I.755.1 1 0 U2 GTAAGAAA..CAAG
gw1.IX.3616.1 1 0 U2 GTAAGCTA..CAAG
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
MNGAELLTQNVSVDWAFSSGPSGGESYRRKNSRYG-------------------------
LDGAELYKQRMSVDWAFSSGP-----AKRRNTRKSCVSL--------------------L
LDGAELHEQIMSVDWAFSSGP-----AKRRNTRKR-------------------------
LDGAELYEQKMSVDWAFSSGP-----AKRRFTRKR-------------------------
LDGTELLTQIISVDWAFSNGP-----VKRRNIRKR-------------------------
MDGTELVTQIINVDWAFSSGP-----VKRRNVRWR-------------------------
MNGKQLLTQTISVNWAFSSGP-----LHRRNVRRR-------------------------
QNGKQLLTQTISVNWAFSSGP-----LHRRNVRRR-------------------------
LNGSELLTQNIYVDWAFSSGPI-NESIRRKNARHPVMNLNIYFKTGQLVIGAPGALAGDI
LNGSELLTQTIYVDWAFSSGPI-NESVRRKNARPP-------------------------
LNGSELLTQTIYVDWAFSSGPI-NESVRRKNARPP-------------------------
MNGTELLTQTISVDWAFSNGP-----FKRRNMRRR-------------------------
MNGGTLLEQIIYVDWAFSNGPS-NWASRRKNMRSV-------------------------
MNGGTLLEQVINVDWAFSNGPS-NWALKRKNMRFV-------------------------
5: 211-213
estExt_fgenesh1_pm.C_chr_90084 2 2 U2 GTATTTGC..ACAG
LOC_Os05g04850.1 2 2 U2 GTATGTTT..TCAG
estExt_Genewise1.C_chr_33529 2 2 U2 GTCTGTCT..GCAG
chr2.CM0018.160.nd 2 2 U2 GTATGTTT..ATAG
Glyma01g43710.1 2 2 U2 GTATGTTT..GCAG
Glyma11g01770.1 2 2 U2 GTATGTTT..GCAG
GSVIVP00034829001 2 2 U2 GTTAGTCC..GCAG
6: 224-224
chr2.CM0018.160.nd 3 1 U2 GTCAGAAC..TCAG
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
-------------------------RSQ----------RSRSP-RRRY------------
DPNIWVVLVTTKSSFKDPTQEKALMFPQHVLNYLLCVTESKKSGDSKYYLGVCGSPDFDG
-------------------------ARSLLVFFLLVSLLDSFPFWC--------------
-------------------------SPP--------RARSRTPPRRRH------------
-------------------------SPR----------RSRSPPRRRY------------
---------------------------------------SRSPVRRRY------------
-------------------------CDS----------YLCFSWSDRYLMF---------
------------------------------------------------------------
DVVCIGNLIVPLCELLNEQFVFYWSRSGNFFQYLCSPFRQNTPWLLRIL-----------
-------------------------RER----------RSRSP-RRRY------------
-------------------------RER----------RSRSP-RRRY------------
-------------------------SPR--------GHRSRSP-RRRY------------
-------------------------S----------------------------------
-------------------------S----------------------------------
At~AT1G51510.1
Zm~AC233958.1_FGP002
Sb~estExt_fgenesh1_pm.C_chr_90084
Zm~GRMZM2G172399_T01
Os~LOC_Os05g04850.1
Sb~estExt_Genewise1.C_chr_33529
Pp~e_gw1.31.212.1
Pp~e_gw1.136.78.1
Lj~chr2.CM0018.160.nd
Gm~Glyma01g43710.1
Gm~Glyma11g01770.1
Vv~GSVIVP00034829001
Pt~gw1.I.755.1
Pt~gw1.IX.3616.1
--
GY
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