SRGD Gene ID 478 BLASTp at NCBI n/a n/a  
OrganismsOs ,Pt ,At ,Pp ,Lj ,Vv ,Sb ,Gm ,Zm
Gene count14
Cintron count19
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 --------------MGKREIHFTPVGRQVQRVLEYPLRLENRSPMSYSRRSRYSPSLSPY
--------------------------------------------MSYSRGSRY--ESDSY
--------------------------------------------MSYSRGSRY--ESDSY
--------------------------------------------MSYSRG-----SSERY
-----------MEQTLDITVVIHSVFQKFIQFYFRYVHKVIIYKMSYSRGSSFFPSSERY
--------------------------------------------MSYTRRSRYSLSPSPY
---------------------------------------------MLLHLFRYSRSPSPY
--------------------------------------------MSYSRRSRYSRSPSPY
MNTLIYGTWRNYPVCNFCLAYSGLGYISLSLIIRSADVSFLFLFGCLLNFGRCHTQEDQG
--------------------------------------------MPYSREGRSVSPANSG
------------------------------------------------------------
------------------------------------------------------------
---------------------------------------------------RYSSSPSPR
------------------------------------------------------------
2: 14-14
AT1G07350.1 0 0 U2 ..
3: 20-20
estExt_fgenesh1_pg.C_chr_14113 0 2 U2 GTATGGTG..GCAG
4: 43-43
estExt_fgenesh1_pg.C_chr_14113 1 0 U2 GTTGTATA..GCAG
5: 50-50
LOC_Os03g15890.1 1 2 U2 GTACGCAT..ATAG
LOC_Os03g15890.2 1 2 U2 GTACGCAT..ATAG
estExt_fgenesh1_pg.C_chr_14113 2 2 U2 GTATGCAC..ATAG
Glyma08g45200.1 0 2 U2 GTGAGACG..ATAG
GSVIVP00002571001 0 2 U2 GTGAGCTT..CTAG
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 -------DKRRGRSVSRSLSRSP----TRSVSSDAENPGNSLYVTGLSHRVTERDLEDHF
--------STSPRRSSRSRYRSR---SRSVDSSDVENPGNNLYVTGLSARVTDRDLEKHF
--------STSPRRSSRSRYRSR----SSVDSSDVENPGNNLYVTGLSARVTDRDLEKHF
------GSRSPYSRSTRYRSRSR-----SVDSSDAENPGNNLYVTGLSARVTDRDLEKHF
------GSRSPYSRSSYSRYRSR---SRSVDSSDAENPGNNLYVTGLSTRVTDRDLEKHF
RRDSRPDSRSLSRSSSRSRSRSR----SRSYSRDVENPGNNLYVTGLSPRITKKELEKHF
--------RRYGRSMSRSLSSPR----SRSRSSEVENPGNNLYVTGLSTRVTKRELEKHF
----KRYSRSVSRSLSRTSSRSR----SRSLSRDAENPGNNLYVTGLSPRITKRELEKHF
ILFLLLQTGDTGLCPGLFQGPNPEAVQGRSFSPDVENPGNNLYVTGLSPRITKRELEKHF
--SPIRGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTRVNASDLEKYF
------------------RNRDR-----SDVREDATNPGNNLYVTGLSTRVTEKDLDEHF
---------------------------RSRREPDINNPGNNLYVTGLSTRVNEKDLQEHF
-------ERERERLPERSRSRSP----VRRGEPDALNPGNNLYVTGLSTRVNEKDLLEHF
-----------------------------RGEPDALNPGNNLYVTGLSTRVNEKDLQEHF
6: 86-88
LOC_Os03g15890.1 2 2 U2 GTATGGTA..TTAG
LOC_Os03g15890.2 2 2 U2 GTATGGTA..GAAG
estExt_fgenesh1_pg.C_chr_14113 3 2 U2 GTATGTCC..TTAG
estExt_fgenesh4_pm.C_LG_IX0568 1 2 U2 GTAATGTC..GTAG
Glyma08g45200.1 1 2 U2 GTAGGAAT..TTAG
GSVIVP00002571001 1 2 U2 GTATATAT..TTAG
gw1.27.117.1 0 2 U2 GTTAGTTC..GAAG
7: 91-91
GSVIVP00024167001 0 2 U2 GTACTTGT..CAAG
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 AKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEKARRRR
SAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYLDRSVLEGRVITVEKAKRRR
SAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYLDRSVLEGRVITVEKAKRRR
STEGEVIDASVVYDPWTRESRGFGFVTMAAVKDADRCIKYLDRSVLQGRVITVEKAKRRR
STEGEVIDASVVHDPWTRESRGFGFVTMATVKEADRCIKYLDRSVLEGRVITVEKAKRRR
SAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEADHCIKYLDRSVLEGRVITVEKAKRKR
ASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEANRCIKYLDRSVLEGRVITVEKARRRR
SAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEADRCVKYLNRSVLEGRVITVEKAKRRR
ATEGKVIDVHLVVDPWTRESRGFGFVTMDTLEDANRCVKYLNRSVLEGRVITVEKARRRR
NSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRLITVEKAKRRR
SREGKVVECRLVVDPRTRESRGFGFVTMDNADDADRCVKYLNRSTLEGRIITVEKAKRKR
SREGKVLECRLVLDPRTRESRGFGFVTMEHLEDAERCIKYLNRSTLEGRMITVEKAKRKR
SQEGKVLECRLVLDPRTRESRGFGFVTMEHLEDAERCIKYLNRSTLEGRIITVEK-----
SREGKVLECRLVLDPRTRESRGFGFVTMEHLEDAERCIKYLNRSTLEGR-----------
8: 124-124
LOC_Os03g15890.1 3 0 U2 GTAACCTT..ACAG
LOC_Os03g15890.2 3 0 U2 GTAACCTT..ACAG
estExt_fgenesh1_pg.C_chr_14113 4 0 U2 GTAACCTT..ATAG
estExt_fgenesh4_pm.C_LG_IX0568 2 0 U2 GTAGGGAT..CTAG
GSVIVP00024167001 1 0 U2 GTATGCCA..CTAG
Glyma08g45200.1 2 0 U2 GTAAGCTC..TTAG
GSVIVP00002571001 2 0 U2 GTATATGC..TTAG
gw1.21.172.1 0 0 U2 GTACTTGC..TCAG
e_gw1.234.40.1 0 0 U2 GTGCGTTG..GCAG
gw1.27.117.1 1 0 U2 GTTCGTAT..ACAG
gw1.3.275.1 0 0 U2 GTGACTTC..GCAG
9: 174-174
LOC_Os03g15890.1 4 0 U2 GTATAATC..ACAG
LOC_Os03g15890.2 4 0 U2 GTATAATC..ACAG
estExt_fgenesh1_pg.C_chr_14113 5 0 U2 GTAAAATG..ACAG
estExt_fgenesh4_pm.C_LG_IX0568 3 0 U2 GTAAAATC..GCAG
GSVIVP00024167001 2 0 U2 GTAAATTG..GCAG
Glyma08g45200.1 3 0 U2 GTATACAT..GCAG
GSVIVP00002571001 3 0 U2 GTACAAGC..GCAG
gw1.21.172.1 1 0 U2 GTGAGTTC..GCAG
e_gw1.234.40.1 1 0 U2 GTGAGAAT..GCAG
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 GRTPTPGKYLGLRTA--------RGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPSY
GRTPTPGRYLGTKSS-----CVTPARRYSPSYSPVER----DRYSSRYSPERERSYSPYG
GRTPTPGRYLGTKSS-----CVTPARRYSPSYSPVER----DRYSSRYSPERERSYSPYG
GRTPTPGKYLGTKSS--------RGRRYSTSYSPDRR----GRYSSRYSPDRRDCHG---
GRTPTPGKYLGTKSS--------RGRRYSPSYSPVRR----DRYSSRYSPDRRDRYSSRY
GRTPTPGRYLGLRTIRVHRWTPSNSPYRSPSHSPLRR-SRSRSPRYSSERNRNRSYSPCY
GRTPTPGKYLGLRTV--------RVRRRSPSYSPYHR-SRSSRYSSERDRSRSRSYSPYY
GRTPTPGKYLGLRTIRAQRRSPSDSPRRSPSYSPYRR--SYSRSPYSSDRSRSRSYSPDY
GRTPTPGRYLGLRTHAGALQVTLLAAALQPILLTEEA--IVVLPILQTAAGVDLDLTPLT
GRTPTPGRYHGLRER-----RGRGGRRRSRSYSPRRW-----------------------
ARTPTPGEYLGVRAH---------------------------------------------
ARTPTPGEYLGVRAN---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
10: 192-192
gw1.21.172.1 2 1 U2 GTGTGTAT..CAAG
e_gw1.234.40.1 2 1 U2 GTATTTTG..CAAG
11: 195-195
estExt_fgenesh4_pm.C_LG_IX0568 4 1 U2 GTATGATG..GCAG
Glyma08g45200.1 4 1 U2 GTGTGTTT..ATAG
12: 200-200
LOC_Os03g15890.1 5 1 U2 GTAAGTTT..ACAG
LOC_Os03g15890.2 5 1 U2 GTAAGTTT..ACAG
GSVIVP00002571001 4 1 U2 GTAATTGT..GCAG
13: 203-203
estExt_fgenesh1_pg.C_chr_14113 6 1 U2 GTAAGTGT..TCAG
GSVIVP00024167001 3 1 U2 GTGAGATG..GCAG
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 GRRGRS-------SSYSPFYRRRRFYSPSRSPSPD----DRYNRR-----RDRSYSPYY-
RRRSYS---PYNRRRSYSPYERRRSYSPHERRQSY----SPYGRSPSPYGRRRSYSPYDT
RRRSYS---PYNRRRSYSPYERRRSYSPHERRQSY----SPYGRSPSPYGRRRSYSPYDT
---------------------RDRSYSPYDRRRSY----SPYGRD-------ESYSPYY-
RRDRYSSRYSPERDLSYSPDGRGRSYSPYDRRRSY----SPHGRH-------GSYSPDD-
HRH----------RSYSPYYYNHHRYLSRSR--------SPYSTSPVS-RHDRSYSPYY-
GR-------------------GRRSYSRSH---------SPYSRSPVG-RRNGSYSPYD-
RRRKSNYPYHSRRRSYSPYYSRYRSYSRYDRHRSYSRSCSPYSRSPVSI-RDRSYSPYD-
IGEGGPTLHTTAGEGGLTLHTTAGAAGHIPGLALL----TTAHLSASVTDHTLLMTPDMI
---------------------QDR---------------DPYARD----RRGRSRSPYG-
---------------------SRGYGGDYGG--------RNGGRDSYSDRRAPRYSPYRG
---------------------RRGGGGRNG---------GGYPRDNRNMRHSPEYAPYQG
------------------------------------------------------------
------------------------------------------------------------
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 ---RRRDRSRSYSRNCRARDRSPYYMRRYRSRSRSYSP---RYRARDRSCSPYYRGRDRS
RGSRRRSYSSYRGSRYRSRSPYRYRRERSCSYDHSVSP---YYRR---------------
RGSRRRSYSSYRGSRYRSRSPYRYRRERSCSYDHSVSP---YYRR---------------
---GRRSYSPYYSRRYRSRSPYCYRRR----RSPSVSP---YYRR---------------
---RRRSYSPYYRNRYRSRSPYRYRRR----RSPSVSP---YYSR---------------
-------------SRHYSPDDRYYRRHHYCSVSRSPTP----------------------
-------------NRYYSPDVGYYRRRHYRSISRSLSP---RERR---------------
-------------SRYDSPDDHSYRRHHYRSVSRGASPDDRYYRR---------------
PRTIAPTEGPVTGHSLEVCRPRQGEGQGGATHEVSLLFGGGGTHQ---VCLPVQGGDRGG
------------------RRSDDYSDSNRRRRERSLSG----------------------
RDGR---------DRERSPRHSPY------------------------------------
GGRDR--------GRERSPRHSPYRSH---ARDRSASPQYGSYRR---------------
------------------------------------------------------------
------------------------------------------------------------
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 YSPHYQGRDRSYSPESRY-YRRHRSVSGSVSP-----GGRSMSRSISPRKGRKESRSKSR
----------CYSP-----SARGRSYSRSVSP------QRSYSHSCSPDSQRSGSYSPRK
----------CYSP-----SARGRSYSRSVSP------QRSYSHSCSPDSQRSGSYSPRK
----HRYRSVSKSSSSSP-RARGRSYSCSLSP------QRSYSRSHSPESERSTSYSP-K
----HRYRSVSKSPSVSPTRTRERSYSHSLSP------QRSYSRSHSPESERSTSYSP-K
-------------------CRARRSYSRSISP--------------SPWRRTSRRSYSRT
-------RLRSYSPRE---RRRLRSYSPSVSPRPRRSSRRSSSRSISPRPRRTSRRSYSR
--HHYRSVSRSASPRPR--RRSRRSYSRSATP----VSKRSNSRSVSPRSRKSHSRSSKR
VIQEALERVVVIIPNASI-RDQGAQVGLKLTRSLSFADYSSRYNKSHSCCELTPSPRLAD
---------------------AGRDYP---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
14: 418-418
estExt_fgenesh4_pm.C_LG_IX0568 5 1 U2 GTATATCC..CTAG
At~AT1G07350.1
Os~LOC_Os03g15890.1
Os~LOC_Os03g15890.2
Zm~GRMZM2G073567_T01
Sb~estExt_fgenesh1_pg.C_chr_14113
Pt~estExt_fgenesh4_pm.C_LG_IX0568
Vv~GSVIVP00024167001
Gm~Glyma08g45200.1
Lj~LjB08M07.70.nc
Vv~GSVIVP00002571001
Pp~gw1.21.172.1
Pp~e_gw1.234.40.1
Pp~gw1.27.117.1
Pp~gw1.3.275.1
 RHDRQS------------SMCHSRSARSSTSRSVSP-----
RYSERKPSRSRSSGK-RHSRESYSHSRSSYSRSVSRERSE-
RYSERKPSRSRSSGK-RHSRESYSHSRSSYSRSVSRERSE-
KGSKREPSRSRYSGKSRHSRESHSHSRSSYSRSVSRERSA-
KGSRREPSCSRYSGKRRRSRESYSHSRSSYSRSVSRERSA-
QGGAQGEAAIHAVNSLHQGGARGGVILEALHQG--------
SISPRPRRLKRSPYREAYSGSSGSASSRSVSRSLTPGSASP
SGKYEK----HYSRSPSVSASSRSVSRSNTPRSTSPST---
ARLAPKINRHRETQFPKHHRTTGMVLEVLWIVMVHQIIGHK
-----------------------------------------
-----------------------------------------
-----------------------------------------
-----------------------------------------
-----------------------------------------