SRGD Gene ID 474 BLASTp at NCBI n/a n/a  
OrganismsOs ,Gm ,Pt ,Mt ,Sb ,At ,Zm ,Pp ,Lj
Gene count14
Cintron count8
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT1G49590.1
Pp~e_gw1.269.82.1
Mt~AC151621_39.2
Zm~GRMZM2G080120_T01
Sb~estExt_fgenesh1_kg.C_chr_100089
Os~LOC_Os06g11170.1
Os~LOC_Os06g11170.2
Pt~estExt_fgenesh4_pg.C_LG_IX0581
Gm~Glyma02g18640.1
Gm~Glyma01g34940.1
Gm~Glyma10g13810.1
Gm~Glyma01g34940.2
Mt~AC151621_38.2
Lj~chr4.CM0079.120.nd
----------------MTEYWVSQGNKWCEFCKIWIQNNPTSIRNHDLGKRHRECVDKKL
----------------Q--YWVSQGKKWCDYCKIFIANNATSLRNHEIGQRHKEAMAQRL
----------------M-------------------------------------------
----------------MTEYWVSQGNKWCDFCKIYIANNSFSIRTHELGKRHKDNVTKRL
----------------MTEYWVSQGNKWCDFCKIYIANNSFSIRTHELGKRHKDNVTKRL
----------------MTEYWVSQGNKWCDFCKIYIANNPLSIRTHEIGKRHKDNVTKRL
--------------------MNYHALLFVTYCSL--------------------------
----------------MTEYWVSQGNKWCDFCKIFISNNPTSIRNHELGQRHKDNVAKKL
----------------MTEYWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRL
----------------MTEYWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRL
----------------MTEYWVSQGNKWCDFCKIYISNNPGSIRNHELGQRHKDNVSKRL
------------------------------------------------------------
----------------MTEYWVSQGNKWCDVCKIYISNNPSSIRNHELGTRHKENVTKRL
MHYMVFVDFYLFTVCSCFQYWVSQGNKWCDFCKIYISNNPSSIRNHELGTRHKDNVAKRL
2: 18-18
AT1G49590.1 0 0 U2 GTAAATCA..TCAG
GRMZM2G080120_T01 0 0 U2 GTACTCTC..TCAG
estExt_fgenesh1_kg.C_chr_100089 0 0 U2 GTACTCTC..TCAG
LOC_Os06g11170.1 0 0 U2 GTACGCTC..CCAG
estExt_fgenesh4_pg.C_LG_IX0581 0 0 U2 GTAAGTAA..GCAG
Glyma02g18640.1 0 0 U2 GTAAATGC..TCAG
Glyma01g34940.1 0 0 U2 GTAAACGC..TTAG
Glyma10g13810.1 0 0 U2 GTAAACGC..TTAG
AC151621_38.2 0 0 U2 GTTTGATC..GCAG
At~AT1G49590.1
Pp~e_gw1.269.82.1
Mt~AC151621_39.2
Zm~GRMZM2G080120_T01
Sb~estExt_fgenesh1_kg.C_chr_100089
Os~LOC_Os06g11170.1
Os~LOC_Os06g11170.2
Pt~estExt_fgenesh4_pg.C_LG_IX0581
Gm~Glyma02g18640.1
Gm~Glyma01g34940.1
Gm~Glyma10g13810.1
Gm~Glyma01g34940.2
Mt~AC151621_38.2
Lj~chr4.CM0079.120.nd
TDMRERSAAKDKELKKNEKLLQQIEAKATRSYQKDIATAQQVAKANGAPEDGTSD--WML
TIMRKDNIAKEKEKQQALKDLERIEQQAKRSYERDVAAAERLAGSANYSAQRAAH--WTL
-------------------------QKAERSYLKDKAKFEEARESHELDSQGE----WEF
STMQKESETKEKEQQQAARALQQIEAKAKKSYQKDLENNQRNVDGDTSAAPGDG---WVL
STMQKESEAKEKEQQQAARALQQIEAKAKKSYQKDLENNQRNVDGDTS-APGDG---WVF
ATMQKEGAAKEKEQQQAARALKQIEAKAKKSYQKDLENSQRNVDGDTSAAPGDG---WEF
-------------------------QKAKKSYQKDLENSQRNVDGDTSAAPGDG---WEF
DSMRKDNIAKEKQQKEAARALEQIEAKANRSYQKDVANLKEASSLRALDIQEDGQEKWDY
AAMRKDNIAKEKEQKETARAIEQIEAKAQRSYQKDKAKFEETRESHELDDQE-----WEF
AAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESHELDDQE-----WEF
AAMRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESHELDDQE-----WEF
--MRKENIAKEKEQKETARAIEQIEAKAQRSYQKDKVKFEETRESHELDDQE-----WEF
ATMRKENAAKDKEHKETANALVQIEA----------------------------------
------------------------------------------------------------
3: 85-85
AT1G49590.1 1 0 U2 GTGAGTAA..TCAG
GRMZM2G080120_T01 1 0 U2 GTAAGTTC..GCAG
estExt_fgenesh1_kg.C_chr_100089 1 0 U2 GTAAGTTC..GCAG
LOC_Os06g11170.1 1 0 U2 GTAAGTTT..GCAG
estExt_fgenesh4_pg.C_LG_IX0581 1 0 U2 GTAAGTGA..ATAG
Glyma02g18640.1 1 0 U2 GTAAGGGT..GCAG
Glyma01g34940.1 1 0 U2 GTAAGGGT..GCAG
Glyma10g13810.1 1 0 U2 GTAAGGGT..GCAG
Glyma01g34940.2 1 0 U2 GTAAGGGT..GCAG
AC151621_38.2 1 0 U2 GTAAGACT..TTAG
4: 110-115
AT1G49590.1 2 1 U2 GTAAGTAT..GCAG
AC151621_39.2 0 1 U2 GTAAGTAT..GCAG
GRMZM2G080120_T01 2 1 U2 GTTGTGTA..GCAG
estExt_fgenesh1_kg.C_chr_100089 2 1 U2 GTTGTGTA..GCAG
LOC_Os06g11170.1 2 1 U2 GTGTGTAT..GCAG
LOC_Os06g11170.2 1 1 U2 GTGTGTAT..GCAG
estExt_fgenesh4_pg.C_LG_IX0581 2 1 U2 GTAAGTAG..ACAG
Glyma02g18640.1 2 1 U2 GTTGTAAG..GTAG
Glyma01g34940.1 2 1 U2 GTTGTAAG..GTAG
Glyma10g13810.1 2 1 U2 GTTGTAAG..GTAG
Glyma01g34940.2 2 1 U2 GTTGTAAG..GTAG
At~AT1G49590.1
Pp~e_gw1.269.82.1
Mt~AC151621_39.2
Zm~GRMZM2G080120_T01
Sb~estExt_fgenesh1_kg.C_chr_100089
Os~LOC_Os06g11170.1
Os~LOC_Os06g11170.2
Pt~estExt_fgenesh4_pg.C_LG_IX0581
Gm~Glyma02g18640.1
Gm~Glyma01g34940.1
Gm~Glyma10g13810.1
Gm~Glyma01g34940.2
Mt~AC151621_38.2
Lj~chr4.CM0079.120.nd
DSASGYYYNQTNGLHYDSQSGFYYSDSIGHWVTQDEAY-AAVKTSS--GTKVPLVK----
DEKSGYYFNAATGYYYDPNSGFYYSDILGKWTTQEEAHQASLKAHAEAGIAPASSTMSKQ
DSSSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAY-ASPHFASNAERNVPSGKKGKI
DSASGYYHDKSTGLYYDSNSGFYYSDSLGKWVTQEEAYKSVQASKSDAGQSSASQTKAPA
DSASGYYHDKSTGLYYDSNSGFYYSDSLGKWVTQEEAYKSVQISKTDIGQSSTSQTKAP-
DSTSGYYYDKSTGLYFDSNSGFYYSDGLGKWVTQEEAYAWAKTSQANAGQSSSSQTKPTA
DSTSGYYYDKSTGLYFDSNSGFYYSDGLGKWVTQEEAYAWAKTSQANAGQSSSSQTK-PT
DSTSGYYYNQSNGLHYDPNSGFYYSDAIGKWVTQEEAY-AAVRISSGSRNKESSFKKPLP
DSSSGYYYHKTNGFYYDQKSGFYYSDTMGKWVTQEEAY-ASPHFTSNARHNGPTVKKSLS
DSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAY-ASPHFTSNAGHNGPTAKKSLS
DSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAY-ASPHFTSNAGHNGPTAKKSLS
DSSTGYYYHKTNGFYYDQKSGFYYSDAIGKWVTQEEAY-ASPHFTSNAGHNGPTAKKSLS
------HYHK--------------------------------------------------
------------------------------------------------------------
5: 147-147
AT1G49590.1 3 1 U2 GTATGTAA..ACAG
AC151621_39.2 1 1 U2 GTATGAGT..ACAG
GRMZM2G080120_T01 3 1 U2 GTAATTTC..GCAG
estExt_fgenesh1_kg.C_chr_100089 3 1 U2 GTAATTTT..GCAG
LOC_Os06g11170.1 3 1 U2 GTACTTCT..GCAG
LOC_Os06g11170.2 2 1 U2 GTACTTCT..GCAG
estExt_fgenesh4_pg.C_LG_IX0581 3 1 U2 GTACAGGG..ACAG
Glyma02g18640.1 3 1 U2 GTACAATG..ACAG
Glyma01g34940.1 3 1 U2 GTACATGC..ACAG
Glyma10g13810.1 3 1 U2 GTACATGC..ACAG
Glyma01g34940.2 3 1 U2 GTACATGC..ACAG
At~AT1G49590.1
Pp~e_gw1.269.82.1
Mt~AC151621_39.2
Zm~GRMZM2G080120_T01
Sb~estExt_fgenesh1_kg.C_chr_100089
Os~LOC_Os06g11170.1
Os~LOC_Os06g11170.2
Pt~estExt_fgenesh4_pg.C_LG_IX0581
Gm~Glyma02g18640.1
Gm~Glyma01g34940.1
Gm~Glyma10g13810.1
Gm~Glyma01g34940.2
Mt~AC151621_38.2
Lj~chr4.CM0079.120.nd
----KPVSS-SGAGPSVGKPPGRLVTASLN------------PKRAVKGAASSVDLGNNK
PSHSKEEPK-ISSSAATVSHPKAAVTTSSTAAQASVPKQKALPSKGGKG--VASSLEVTK
TLQSISDDEYKPNKHHKGTLPVRVN-----------------PMRNAKTA-AASSLAVGK
AAET------AVPAIKGGAAPGRVVTKPLN------------PMRPIKGTPAPSAVAVNK
AAET------AVPAIKGGPAPGRVVTKPLN------------PMRPIKGTPAPSAVAVNK
SVA-------TVPTIKGGQAPGLVVKKPLN------------PMRTVKG--APSAIAVNK
ASVA------TVPTIKGGQAPGLVVKKPLN------------PMRTVKG--APSAIAVNK
ASAVSSVKE-NKVAAQSGPPPGPVVSASLN------------PRRSVKG--APSKFAVNK
TSQSKSDGN-QANKFNNRSSPGPVVTT-LN------------PKRNVKA--APSSLAVGK
TSQSKSDEN-KGNKFNNGSSPGPVVTTSLN------------PKRNVKA--APSSLAVGK
TSQSKSDEN-KGNKFNNGSSPGPVVTTSLN------------PKRNVKA--APSSLAVGK
TSQSKSDEN-KGNKFNNGSSPGPVVTTSLN------------PKRNVKA--APSSLAVGK
------------------------------------------------------------
------------------------------------------------------------
At~AT1G49590.1
Pp~e_gw1.269.82.1
Mt~AC151621_39.2
Zm~GRMZM2G080120_T01
Sb~estExt_fgenesh1_kg.C_chr_100089
Os~LOC_Os06g11170.1
Os~LOC_Os06g11170.2
Pt~estExt_fgenesh4_pg.C_LG_IX0581
Gm~Glyma02g18640.1
Gm~Glyma01g34940.1
Gm~Glyma10g13810.1
Gm~Glyma01g34940.2
Mt~AC151621_38.2
Lj~chr4.CM0079.120.nd
RKRQDEKPKKVSAEEKAALKAREAARKRVEDREKPLLGLYNRPF
RRR-DEKTGPVSSEEAAALAAREAAKKRVLDREKSLLGLYQAY-
RKRPNEKPKVISQEEKEALKAREAARKRVEQREKPLLGLYNKPY
RKRDDGKPKAVSKEEEAALKAREAARKRVEDREKPLMGLYKTY-
RKREDGKPKVISKEEEAALKAREAARKRVEDREKPLMGLYKTY-
RKREDGKPKVISKEEEAALKAREAARKRMEDREKPLMGLYRSY-
RKREDGKPKVISKEEEAALKAREAARKRMEDREKPLMGLYRSY-
RKRPDEKPKA----------------------------------
RKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY
RKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY
RKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY
RKRPGEKSKVISDEEKAALKAREAARKRVQEREKPLLGLYNKPY
--------------------------------------------
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