SRGD Gene ID 473 BLASTp at NCBI n/a n/a  
OrganismsPp ,Gm ,Pt ,At ,Os ,Sb ,Lj ,Vv ,Zm
Gene count14
Cintron count1
Cintron classesU2 ,em ,absent
Home (Search) Bookmark for this page        Download data


Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
MPQRHSKNNNDLAFFTYDERKKLGYGTQKERLGKDSIKPFDACCICLQPIIDPMSCMKGH
MPQRHSKNNNDLAFFTYDERKKLGYGTQKERLGKDSIKPFDSCCTCLQPVVDPLSCGKGH
MPQRHSKNNNDLAFFTYEEKRKLGYGTQRERLGKDSIKPFDACCLCLKPLIHPLCCPKGH
MPQRHSKNNNDLAFFTYEEKRKLGYGTQRERLGKDSIKPFDACCLCLKPLIDPLCCPKGH
MPQRHSKNNNDLAFFTYEEKRKLGYGTQRERLGKDSIKPFDACCLCLKPLIDPLCCPKGH
MPQRHSKNNNDLAYFTYDEKKKLGYGTQRERLGRDSIKPFDACSLCLKPFIDPMCCHKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPMSCQKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPMSCQKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACCLCLKPFIDPMSCQKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGRDSIKPFDACCLCLKPFIDPLCCQKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGRDSIKPFDACCLCLKPFIDPLCCQKGH
------------------------------------------------------------
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACSLCLKSLIDPMSCQKGH
MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDACSLCLKSLIDPMSCQKGH
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
LFCKECIIECLVAQKKDIKRKLAAFIQQQKSDKEEEIDKVTAEKQQELDAFDRQNNSAVP
LFCKECVFECLLAQKKDIKRKLATFTQQQKSDKEDELEKITVEKQRELDAFVRQNNSAVS
TFCKECILECLLAQKKDIKRKLAAHEAQKKLEKEEEDEKRMLQKSKELDAFDQQNHGAVP
TFCKECILECLLAQKKDIKRKLAAHEAQKKQEKEEEEEKLILQKAKELDAFDQQNHGAVP
TFCKECILECLLAQKKDIKRKLAAHEAQKKQEKEEEEEKLILQKAKELDAFDQQNHGAVP
VFCRECILECFLAQKKDIQRRLAAHSSQKKQDKDEEEERLMLQKARELDEFDQQNHSAMP
VFCKECILECLLAQKKDIQRKLASHELQKKQEKEEEAEKLMSQKARELDAFDQQNHGAVP
VFCKECILECLLAQKKDIQRKLAAHELQKKQEKDEEKEKLMLQKARELDAFDQQNHGAVP
VFCKECILECLLAQKKDIQRKLAAHELQKKQEKDEEKEKFMLQKARELDAFDQQNHGAVP
VFCKECILECLLAQKKDIQRKLAAHAAQLKQEKEEEEERLTLQKARELDAFDQQNHGAVP
VFCKECILECLLAQKKDIQRKLAAHAAQLKQEKEEEEERLTLQKARELDAFDQQNHGAVP
--------------------RLVAHAAQQKQEKDEEEERLTLQKAKELEAFDQQNHGAVP
LFCKECILQCLLSQKKDIQRKLAAHAAQQKQEKEEEEEKLKLQKAKELDAFDQQNHGAVP
LFCKECILQCLLSQKKDIQRKLAAHAAQQKQEKEEEEEKLMLQKAKELDAFDQQNHGAVP
1: 78-78
estExt_fgenesh1_pm.C_2200004 0 2 U2 GTGAGTTG..TCAG
estExt_gwp_gw1.C_2580008 0 2 U2 GTGATATG..GCAG
LOC_Os03g17170.1 0 2 U2 GTACCCCC..CCAG
Sb01g039130 0 2 U2 GTAGGTAG..CCAG
AT1G61620.1 0 2 U2 GTATAAAC..ATAG
eugene3.00110341 0 2 U2 GTAATAGC..CCAG
fgenesh4_pm.C_LG_IV000045 0 2 U2 GTAACAGC..TCAG
estExt_fgenesh4_pg.C_24050001 0 2 U2 GTAACAGC..TCAG
Glyma13g32150.1 0 2 U2 GTATGAAA..ACAG
Glyma15g07150.1 0 2 U2 GTAACAAC..ATAG
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
HQQIAGSSGDRHVFHGANSVRVTSYEEEALRTMKAFWLPSATPGAVERVQAPSTDTVCPE
HQQITGHPGDRHEFHGANSVRVTSYEEEALRTMKAFWLPSATPGAVERVSAPSSDTICPE
QYHDRSGSEDKNGFHGANSVKVTSFEEEALRNMKAFWLPSATPEATAKVEAPSTDTICPE
QYHDRSGSQGKNGFHGANSVKVTSFEEEALRNMKAFWLPSATPEATVKVDAPSADTVCPE
QYHDRSGSQDKNGFHGANSVKVTSFEEEALRNMKAFWLPSATPEATVKVDAPSTDTVCPE
RNSDKNHNEDKNGFHGANSVKTTSFEEEALRTMKAFWLPSATPAASVRVDAPETHTVCPE
QYSDRNHSQDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPVAPVKVDAPSTSTVCPE
QYSDRNHSQDKPGFHGANSVKVTSYEEEALRTMKAFWLPSATPDAPVKVDAPSTSTVCPE
QYSDRNHSQDKPGFHGANSVKVTSYEEEALRTMKAFWLPSATPDAPVKVDAPSTSTVCPE
QYSDKNHTRDKNGFHGANSVKVTSYEEEALRNMKAFWLPSATPEAPVKVEAPSTSTVCPE
QYSDKNHTRDKNGFHGANSVKVTSYEEEALRNMKAFWLPSATPEAPVKVEAPSTSTVCPE
QYSDRNYSRDKNGFHGANSVKTTSYEEEALRTMKAFWLPSATPEAAAKVDAPSTSTICPE
QYSDRNYSRDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEASIKVDAPSNSTICPE
QYSDKTYSRDKNGFHGANSVKVTSYEEEALRTMKAFWLPSATPEASVKVDAPSTSTICPE
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
GKEKLKLKGLFPVVFTEVRNREKKEV-------DLDSFKYMCPSCSVTLTDTLTLVAVST
GNEKLKLKDLFPVVFTEVRNREKKEV-------DLDGFRYMCPSCSVTLTNTLTLVAVSS
GQEKLKLKSLFPISFTEENTDQKNKK-------SVEK-SYMCPSCKSTLTNTMSLVTIST
GQEKLKLKSLFPISFMEETADPKRKK-------AMEK-SYMCPSCKSTLTNTMSLVAVSA
GQEKLKLKSLFPISFTEETVDQKSKK-------TVEK-SYMCPSCKSTLTNTMSLVAVST
GKEKLKLKNLFAIRFTEDNSEEEETKTKSASSSSYDK-SYICPSCKVTLTNTMSLVALSS
GKEKLKLKSLFPVYFTEDTSEKKSSS-------SLDK-TFICPSCKVTLTNTLSLVALSS
GKEKLKLKSLFPVYFTEDTSEKKSSS-------SLDK-TYICPSCKVTLTNTLSLVALSS
GKEKLKLKSLFPVYFTEDTSEKKSSS-------SLDK-TYICPSCKVTLTNTLSLVALSS
GNEKLKLKTLFPIHLTEDRSEQKKSK-------SLDK-TYICPSCKVTLTNTMSLVALSS
GNEKLKLKTLFPIHLTEDRSEQKKSK-------SLDK-TYICPSCKVTLTNTMSLVALSS
GNEKLKLKTLFPVIFTEDTSEPKNPK-------ALDN-SYICPSCKVTLTNTMSLVAISS
GNEKLKLKTLFPVQFTEDTTEQKKSK-------ALDK-TYICPSCKVTLTNTMSLVALST
GKEKLKLKTLFPVQFTEDTSEQKKFK-------ALDK-TYICPSCKVTLTNTMSLVALST
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
CGHVFCKKCADKFVAPDKICLACNNPCKPKNLITLEKGGTGFAGHDENLEAKAFKHVGSG
CGHVFCKRCADKFIATDKVCLDCNKPCRAKNLITLEKGGTGFSGHDENLEAKAFKHVGSG
CGHVFCKKCSDKFLVTDKVCLVCNKPCKERNFVPLEKGGTGFAAHDERLEARDFKHLGSG
CGHVFCKKCSDKFLVKDKVCLECSKSFKERNLVPLEKGGTGFAAHDERLEARDFKHLGSG
CGHVFCKKCSDKFLVKDKACLECSKPFKERNLVPLEKGGTGFAAHDERLEARDFKHLGSG
CGHVFCKKCAEKFMPVDKVCLVCDKPCKDRNLVGLKKGGTGFAEHDDHLEAKEYKHLGSG
CGHVFCKKCADKFMAVDKVCLACGKGCKERNLVNLEKGGTGFAGHDDHLVATDFKHLGSG
CGHVFCKKCSDKFMAVDKVCLVCTKGCKERNLVNLGKGGTGFAGHGDHLMATEFKHLGSG
CGHVFCKKCSDKFMAVDKVCLVCTKGCKERNLVNLGKGGTGFAGHGDHLMATEFKHLGSG
CGHVFCKKCADKFMAVDKVCLVCNKGCKDRNLVPLEKGGTGFAGHGDHLEATDFKHLGSG
CGHVFCKKCAGKFMAVDKVCLVCNKGCKDRNLVPLEKGGTGFAGHGDHLEATDFKHLGSG
CGHVFCKKCANRFMASDKVCLVCNKACKERHLVNLEKGGTGFAGHGDHLEARDFKHLGSG
CGHVFCKKCADRFMAVDKVCLVCNKACKERNLVNLEKGGTGFAGHGDHLEARDFKHLGSG
CGHVFCKKCADRFMAVDKVCLVCNKACKERNLVNLEKGGTGFAGHGDHLEATDFKHLGSG
Pp~estExt_fgenesh1_pm.C_2200004
Pp~estExt_gwp_gw1.C_2580008
Os~LOC_Os03g17170.1
Zm~GRMZM2G171232_T01
Sb~Sb01g039130
At~AT1G61620.1
Pt~eugene3.00110341
Pt~fgenesh4_pm.C_LG_IV000045
Pt~estExt_fgenesh4_pg.C_24050001
Vv~GSVIVP00005291001
Vv~GSVIVP00011001001
Lj~LjSGA_085754.1
Gm~Glyma13g32150.1
Gm~Glyma15g07150.1
TGMGLARPTTKL-
TGMGLSRPTTKL-
SGLGLVKPAPKNY
SGLGLVKPAPKAY
SGLGLVKPAPKAF
SGLGLVRP-VKT-
SGLGLVRPATKT-
SGLGLVRPAAKS-
SGLGLVRPAAKS-
SGLGLVRPAMKT-
SGLGLVRPAMKT-
SGLGLVRPAMK--
SGLGLVRPAMKT-
SGLGLVRPAMKT-