SRGD Gene ID 472 BLASTp at NCBI n/a n/a  
OrganismsOs ,Pt ,Gm ,Vv ,Mt ,Zm ,Pp ,Lj ,Sb ,At
Gene count14
Cintron count14
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944
 ----------------------------------------------------------MS
----------------------------------------------------------MS
----------------------------------------------------------MS
--------------------------------------------MLIQYDMWCYETLFQS
----------------MKILSLCVYSNPYYHFRIGTSLFIVAQTQISTIRSPTLRELSMS
----------------------------------------------------------MS
----------------------------------------------------------MS
----------------------------------------------------------MS
----------------------------------------------------------MS
----------------------------------------------------------MS
MYGQGPALFLGEFFPLPPLRPCRAAAAASTVRAKIRSSLSAIFGRRRQQDLREGFRVEMA
----------------------------------------------------------MA
----------------------------------------------------------MA
2: 17-17
Glyma05g28190.1 0 1 U2 GTAAAAAA..CAAG
3: 58-58
estExt_gwp_gw1.C_1900008 0 0 U2 GTACAGGA..TTAG
estExt_Genewise1.C_350284 0 0 U2 GTATGATT..TCAG
AT2G03870.1 0 0 U2 GTAAAGTT..ACAG
Glyma05g28190.1 1 0 U2 GTAAGATT..ACAG
LOC_Os08g08040.1 1 0 U2 GTAAGTTG..GCAG
Glyma08g11160.1 0 0 U2 GTAAGTTT..ACAG
estExt_Genewise1_v1.C_LG_IX3230 1 0 U2 GTAATTGA..TCAG
chr3.LjT46L11.10.nc 0 0 U2 GTGAGTAG..TCAG
GRMZM2G106105_T01 0 0 U2 GTAAGCGT..TCAG
estExt_Genewise1.C_chr_67944 0 0 U2 GTAAGCGT..TCAG
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944
 GRKETVLDLAKFVDRGVSVKLSGGRQVTGILKGYDQLLNLVLDEATENLRDSDDPMKTTD
GRKETVLDLAKFVDRGVSVKLSGGRQVTGTLKGYDQLLNLVLDEATENLRDSDDPLKTTD
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTD
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTD
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTD
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKLSG
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTD
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTD
----------------------------------------------------------MS
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-----------
GRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENEREQDDPLKLSG
GRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYEREQDDPLKLSG
GRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKLSG
4: 85-85
estExt_gwp_gw1.C_1900008 1 1 U2 GTGAGCAG..GCAG
estExt_Genewise1.C_350284 1 1 U2 GTTGGTTA..GCAG
AT2G03870.1 1 1 U2 GTAATAAA..GCAG
GSVIVP00008837001 0 1 U2 GTCTTGAA..ACAG
Glyma05g28190.1 2 1 U2 GTTAGGTT..GCAG
LOC_Os08g08040.1 2 1 U2 GTTGGTTG..GCAG
Glyma08g11160.1 1 1 U2 GTTAGGTT..GCAG
chr3.LjT46L11.10.nc 1 1 U2 GTGTGTGT..TCAG
GRMZM2G106105_T01 1 1 U2 GTTGATTT..CCAG
estExt_Genewise1.C_chr_67944 1 1 U2 GTTGATTT..CCAG
5: 109-109
estExt_gwp_gw1.C_1900008 2 1 U2 GTCAGGTG..TCAG
estExt_Genewise1.C_350284 2 1 U2 GTGAGGTT..GCAG
AT2G03870.1 2 1 U2 GTATCTTT..TCAG
GSVIVP00008837001 1 1 U2 GTAAATCA..GCAG
Glyma05g28190.1 3 1 U2 GTAACTAA..GCAG
LOC_Os08g08040.1 3 1 U2 GTACTGCT..GTAG
Glyma08g11160.1 2 1 U2 GTAACTAA..GCAG
GRMZM2G106105_T01 2 1 U2 GTATTTTG..GTAG
estExt_Genewise1.C_chr_67944 2 1 U2 GTATTTTC..GTAG
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944
 QIRQLGLIVCRGTAVMLVAPTDGTEEIPNPFLQNETPAAT
QMRQLGLIVCRGTAVMLVAPTDGTEEIANPFLANETPAAT
QTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVTAEAV---
QTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA---
QTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS---
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPF-QSDGA---
QTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS---
QTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA---
GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD
----------------------------------------
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPFL-ADGA---
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPFL-AEGA---
KTRQLGLIVCRGTAVMLVSPTDGTDEIANPFL-ADGA---
6: 127-127
estExt_gwp_gw1.C_1900008 3 0 U2 GTAAGTTC..GCAG
estExt_Genewise1.C_350284 3 0 U2 GTAAGTTC..TCAG
AT2G03870.1 3 0 U2 GTATGATT..TTAG
GSVIVP00008837001 2 0 U2 GTATGTTC..GCAG
Glyma05g28190.1 4 0 U2 GTAAGTTC..GCAG
LOC_Os08g08040.1 4 0 U2 GTAAGTTT..GCAG
Glyma08g11160.1 3 0 U2 GTAAGTTC..GCAG
GRMZM2G106105_T01 3 0 U2 GTAAGTAT..GTAG
estExt_Genewise1.C_chr_67944 3 0 U2 GTAAGTAT..GCAG
7: 143-143
estExt_Genewise1_v1.C_LG_IX3230 2 1 U2 GTCGATAC..TCAG
8: 167-167
estExt_Genewise1_v1.C_LG_IX3230 3 1 U2 GTAACCAT..GCAG
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944







GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD
9: 185-185
estExt_Genewise1_v1.C_LG_IX3230 4 0 U2 GTATGTTT..ACAG
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944







QTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA---QTRRLGLIVCRGTAVMLVSP
Pp~estExt_gwp_gw1.C_1900008
Pp~estExt_Genewise1.C_350284
At~AT2G03870.1
Vv~GSVIVP00008837001
Gm~Glyma05g28190.1
Os~LOC_Os08g08040.1
Gm~Glyma08g11160.1
Mt~AC142224_16.2
Pt~estExt_Genewise1_v1.C_LG_IX3230
Lj~chr3.LjT46L11.10.nc
Zm~GRMZM2G016097_T01
Zm~GRMZM2G106105_T01
Sb~estExt_Genewise1.C_chr_67944







TDGTDEIANPFVQPDGA---


3' UTR introns