SRGD Gene ID 470 BLASTp at NCBI n/a n/a  
OrganismsAt ,Sb ,Vv ,Mt ,Os ,Gm ,Zm ,Pp ,Lj ,Pt
Gene count14
Cintron count20
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSSERNQDATAYVGNLDPQLSEDLLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
MTIRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
MTTRITPGVGANLLGQHAAERNQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDR
------------------------------------------------------------
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR
MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDR
2: 0-0
AT2G18510.1 0 0 U2 ..
3: 34-34
LOC_Os10g31900.1 0 0 U2 GTTAGGGT..ACAG
estExt_fgenesh1_pg.C_chr_12143 1 0 U2 GTTAGGGT..ATAG
GRMZM2G102639_T01 0 0 U2 GTTAGGGT..ACAG
GRMZM2G170699_T01 0 0 U2 GTTAGGGT..ATAG
estExt_gwp_gw1.C_700168 0 0 U2 GTGTCTGT..GCAG
GSVIVP00024968001 0 0 U2 GTTCTCTC..GCAG
Glyma09g00310.1 0 0 U2 GTAACTAT..GCAG
Glyma12g36950.1 0 0 U2 GTAACTAT..GCAG
4: 50-50
LOC_Os10g31900.1 1 1 U2 GTAAGTAT..GTAG
estExt_fgenesh1_pg.C_chr_12143 2 1 U2 GTAAGTGG..GTAG
GRMZM2G102639_T01 1 1 U2 GTAAGTGG..GTAG
GRMZM2G170699_T01 1 1 U2 GTAAGTGG..GTAG
estExt_gwp_gw1.C_700168 1 1 U2 GTTAGTGA..ACAG
GSVIVP00024968001 1 1 U2 GTAAGTTC..TCAG
AC139882_12.2 0 1 U2 GTACTATC..TCAG
Glyma09g00310.1 1 1 U2 GTAATATC..TCAG
Glyma12g36950.1 1 1 U2 GTAATTTC..TCAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFVEFRSEEDSDYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNLHQGYGFIEFRSEDDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
------------------------------------------------------------
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
5: 80-80
LOC_Os10g31900.1 2 0 U2 GTAAGTCT..TTAG
estExt_fgenesh1_pg.C_chr_12143 3 0 U2 GTAAGGCT..ACAG
GRMZM2G102639_T01 2 0 U2 GTAAGTCT..ACAG
GRMZM2G170699_T01 2 0 U2 GTAAGTCT..ACAG
estExt_gwp_gw1.C_700168 2 0 U2 GTAAGTAC..GCAG
GSVIVP00024968001 2 0 U2 GTAAGTGT..GCAG
AC139882_12.2 1 0 U2 GTATGTTT..GCAG
Glyma09g00310.1 2 0 U2 GTATGTAA..GCAG
Glyma12g36950.1 2 0 U2 GTATGCTA..GCAG
6: 99-99
LOC_Os10g31900.1 3 0 U2 GTAAGTAC..CCAG
estExt_fgenesh1_pg.C_chr_12143 4 0 U2 GTATTCCC..CCAG
GRMZM2G102639_T01 3 0 U2 GTATTTTC..CCAG
GRMZM2G170699_T01 3 0 U2 GTATTTTC..GCAG
estExt_gwp_gw1.C_700168 3 0 U2 GTGAGCTA..GCAG
GSVIVP00024968001 3 0 U2 GTGTGACA..CCAG
AC139882_12.2 2 0 U2 GTACTTTT..ATAG
Glyma09g00310.1 3 0 U2 GTATGAAT..CCAG
Glyma12g36950.1 3 0 U2 GTATGAAA..CTAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS
PDVDEKLLHDTFSAFGVTVTNPKIMRDPETGNSRGFGFISYGSFXASDAAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQYLC
-----------------------------------------------------MNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC
7: 120-120
LOC_Os10g31900.1 4 0 U2 GTAAAAAC..TCAG
estExt_fgenesh1_pg.C_chr_12143 5 0 U2 GTGAAGGC..ACAG
GRMZM2G102639_T01 4 0 U2 GTGAAGGC..ACAG
GRMZM2G170699_T01 4 0 U2 GTGAAGGC..ACAG
estExt_gwp_gw1.C_700168 4 0 U2 GTAAGTCA..GCAG
GSVIVP00024968001 4 0 U2 GTAAGTAG..GCAG
AC139882_12.2 3 0 U2 GTAAGTCA..GCAG
Glyma09g00310.1 4 0 U2 GTAAGTCA..GCAG
Glyma12g36950.1 4 0 U2 GTAAGTAA..GCAG
8: 142-142
LOC_Os10g31900.1 5 0 U2 GTATCATT..ATAG
estExt_fgenesh1_pg.C_chr_12143 6 0 U2 GTGACACA..AAAG
GRMZM2G102639_T01 5 0 U2 GTGACAGT..GAAG
GRMZM2G170699_T01 5 0 U2 GTGACGCA..AAAG
estExt_gwp_gw1.C_700168 5 0 U2 GTATGGTT..TCAG
GSVIVP00024968001 5 0 U2 GTGACGCC..TCAG
AC139882_12.2 4 0 U2 GTTTTACT..GCAG
Glyma09g00310.1 5 0 U2 GTTTTTCT..GCAG
Glyma12g36950.1 5 0 U2 GTTTTTCT..GCAG
9: 171-171
LOC_Os10g31900.1 6 0 U2 GTAACACA..CCAG
estExt_fgenesh1_pg.C_chr_12143 7 0 U2 GTAATGTA..TCAG
GRMZM2G102639_T01 6 0 U2 GTAATGGA..TCAG
GRMZM2G170699_T01 6 0 U2 GTAATGTA..TCAG
estExt_gwp_gw1.C_700168 6 0 U2 GTAAGCTT..GCAG
GSVIVP00024968001 6 0 U2 GTATATAT..GCAG
AC139882_12.2 5 0 U2 GTATGGCT..ACAG
Glyma09g00310.1 6 0 U2 GTATGCCT..GTAG
Glyma12g36950.1 6 0 U2 GTATGCCT..GTAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNG--
NRQITVSYAYKKDAKGERHGTPAERVLAESNPTNQKSRPHTLFASGPPTL--PTHANGAV
NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT---QGLANG--
NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT---QGLPNG--
NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT---QGHPNG--
NRPITVSYAYKKDTKGERHGTPAERLLASNNPGSQKNRPHTMFASGPPT---QGLPNG--
NRAITVSYAYKKDTKGERHGTLAERMLASSNPNTTKSRPHTLFASGPPSLVGPPQLGQ--
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPTLAGAPQANGTI
NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANGV-
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSAPQANGV-
10: 202-202
LOC_Os10g31900.1 7 1 U2 GTATTGTG..ACAG
estExt_fgenesh1_pg.C_chr_12143 8 1 U2 GTAATGTG..ACAG
GRMZM2G102639_T01 7 1 U2 GTAATGTG..ACAG
GRMZM2G170699_T01 7 1 U2 GTAATGTG..ACAG
estExt_gwp_gw1.C_700168 7 1 U2 GTGTGTAT..GCAG
GSVIVP00024968001 7 1 U2 GTAAGGTT..GCAG
AC139882_12.2 6 1 U2 GTGAGCCC..GCAG
Glyma09g00310.1 7 1 U2 GTGAGGCC..GCAG
Glyma12g36950.1 7 1 U2 GTGAGGTC..GCAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
----LPRPFANGSMQPVPIPAPRQPPPPPPQVYQT-------QPPSW------PSQPQ-Q
MAPVPPRPFANGAVAQGPVPALH-RPPPLNAAFTP-MQV--AGQPAW------RGQPLQQ
--APVPRPFSNGAVPPQIQHVR--PPPPPMQQFPP-MQM--NGQPVW------PPQNTQL
-GPPVPRPYGNGTIPGQIQHMRQ-PPPPPVGQFPPPMQM--HGQPAW------PAQQP-M
-GPPVPRPYGNGTIPGQIQHIRQ-PPPPPVGQFPPPMQM--HGQPTW------PAQHS-M
-GPPVPRPFGNGTIPGQIQHIRQPPPPPPVGQFPPPMQM--HGQPAW------PAQHS-M
-GLPPAPPQANGNM-GMPMNGHMHPPPFAGGQGPP-LQ--------W-G--NQPQQMM-Q
AAPVPPRPFANGVAPP---ALRQ-PPPPQAAPFQP---M--PGQPTWHQ--QQPGQ-L-P
GAPMPPRPFANGVVPPVPIPAMR-PPPPQSGAFPP-MQL--AGPPSWQGQPQQPGQPM-Q
PAPVPPRPFANGVAPP-PIHVIQ-PPPPQAPAFQP-MQMPPPGQQVWHQ--QQQGQPM-M
PAPVPPRPFANGVAPP-PIHVIQ-PPPPQAPAFQP-MQMPPPGQQVWHQ--QQQGQPM-M
PAPVPPRPFANGVAPP-PIHVIQ-PPPPQAPAFQP-MQMPPPGQQVWHQ--QQQGQPM-M
-APVPPRPFANGVAPP-AIPALR-PPPPQAAAFQP-MPV--PGQPTWHQ--QQPGQTL-L
-APVPPRPFVNGVAPA-AIPTLR-PPPPQAAAFQP-MPV--PGQPAWHQ--QQPGQTM-L
11: 268-268
estExt_gwp_gw1.C_700168 8 1 U2 GTGGCCCT..CAAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
HSMVPPPM----QFRPPQ----GMPP--PPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGG
GQPMPPPPV---QFRPPPP---NMPR--PP-PQAAP-----MFPRPPPQHMAMEAQ-PQV
PPHMPPQMHYRPAVRPPPPN--MMPP--PP-----L-----GMVRPPPPPSSMPA--PPM
PPPMASQLQYRLPMRPPPPN--MMPP--PV-----------SMVK---------------
PPPMPSQLQYRLPMRPPPPN--MMPP--PV-----------GMVRPPPPPTGMSA--PPM
PPHMSSQLQYRLPMRPPPPN--MMPP--PV-----------GMVRPPPPPTGMSA--PHM
QQGMPPQGMPPPQFRPGPPG--SRPPNMPPPPHGFH-----VGPPGGPPPMGMGG--PPP
PPTMPPPQ-YQ-QFRPPPSGM-QMPP--PP--QGVP-----GPPRHLPPPAVMGGQPPQV
PPMMPPPPLQ--QFRPPPP---SMPP--PP-QQVMQ-----ALSRPPPPPALMGGP-PPV
QQGMPPPMQ---QFRPPHSM--QMPP--PPPPQGMQ-----GPPRPLPPPSVMAGQ-QQV
QQGMPPPMQ---QFRPPHSM--QMPP--PPPPQGMQ-----GPPRPLPPPSVMAGQ-QQV
QQGMPPPMQ---QFRPPHSM--QMPP--PPPPQGMQ-----GPPRPLPPPSVMAGQ-QQV
PPAMPPPPQVQ-QFRPPHPGMQQMPP--PP-----Q-----APPRPLPPPSVMASQPPPV
SPAMPPPQIQ--QFRPPHPGMQQMPP--PP-----Q-----APPRPLPPPSVMASQPPPV
12: 342-342
estExt_fgenesh1_pg.C_chr_12143 9 0 U2 GTAAGGCC..GCAG
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
W------------PPQHMQ----------------------QQGGPPQQQQPPYQHHHMS
W---------QQPPPP--Q----------------------HFSGRP----P-MPQMLMQ
W---------RPPPPP--Q----------------------QAGGMP----P--PPMSMP
----------MRFE------------------------------GLPDIYKLKINSYLCC
W---------MPPPPPP-H----------------------QGGGMP----P--PPMSMP
W---------MPPPPPPSS----------------------QQGGMP----P--PPMSMP
WGRGPPPQGMRPPPPGMQQQQQQQQQQQQQQQQQQMNQQQMQQGLPP----PPRGPPGIP
W---------RPPPPPQYQ----------------------QQVGRP----MAYPQSSMP
W---------RPPPPP--Q----------------------QLAGRP----PTMLQMSMP
W---------RPPPPP--Q----------------------QQGGHP----MGYPQNSMP
W---------RPPPPP--Q----------------------QQGGHP----MGYPQNSMP
W---------RPPPPP--Q----------------------QQGGHP----MGYPQNSMP
W---------R-LPPP--Q----------------------QQGGRP----LPYPQSGMP
W---------RP-PPP--Q----------------------QQGGRP----LPYPQSAML
At~AT2G18510.1
Pt~gw1.57.217.1
Os~LOC_Os10g31900.1
Sb~estExt_fgenesh1_pg.C_chr_12143
Zm~GRMZM2G102639_T01
Zm~GRMZM2G170699_T01
Pp~estExt_gwp_gw1.C_700168
Lj~LjSGA_046448.1
Vv~GSVIVP00024968001
Mt~AC139882_12.2
Mt~AC148818_28.2
Mt~CT009535_3.2
Gm~Glyma09g00310.1
Gm~Glyma12g36950.1
M--PPPPP-----------------------------HQG------
P--RPPPN--------------------------APPPPP------
P--PPPPP------------------------------SG------
VEDE------------------------------------------
P--PPPPP------------------------------SS------
P--PPPPP------------------------------SG------
P--PPPGS--------------------MMGGSGVRPPPPPDSQGR
P--PPPLP----------------------------NNHG------
P--PPPPP-----------------------------AAG------
P--PPPPN-----------------------HHGMRPPSG------
P--PPPPN-----------------------HHGMRPPSG------
P--PPPPN-----------------------HHGMRPPSG------
P--PPPPHIDCNMNILRQSTERLAPQMTQYFHRLIISSRS------
P--PPPPQ--------------------------------------
13: 426-426
Glyma09g00310.1 8 2 U2 GTAACCCT..CTAG
14: 439-439
Glyma09g00310.1 9 0 U2 GTCATATA..TCAG