SRGD Gene ID 469 BLASTp at NCBI n/a n/a  
OrganismsPt ,Pp ,At ,Mt ,Vv ,Os ,Gm ,Zm ,Sb
Gene count14
Cintron count8
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_2180063
Pp~estExt_Genewise1.C_4750009
Os~LOC_Os03g29740.1
Sb~estExt_Genewise1Plus.C_chr_210320
Zm~GRMZM2G057865_T01
Sb~estExt_fgenesh1_kg.C_chr_10370
At~AT2G23930.1
At~AT3G11500.1
Pt~estExt_Genewise1_v1.C_LG_XVI2449
Vv~GSVIVP00021594001
Gm~Glyma03g35490.1
Gm~Glyma19g38130.1
Mt~AC150442_9.2
MSKSGQPPDLKKYMDRKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEVQGAEKNEIGMV
MSKSGQPPDLKKYMDKKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEINGADRNEIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNDKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDDKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV
2: 0-0
AT3G11500.1 0 0 U2 ..
AC150442_9.2 2 0 U2 ..
4: 10-10
LOC_Os03g29740.1 0 2 U2 GTAAGCCT..CCAG
estExt_Genewise1Plus.C_chr_210320 0 2 U2 GTAACATC..CCAG
estExt_fgenesh1_kg.C_chr_10370 0 2 U2 GTAAGCGC..CCAG
AT2G23930.1 0 2 U2 GTAAGCCC..GCAG
estExt_Genewise1_v1.C_LG_XVI2449 1 2 U2 GTAAGCAT..ACAG
GSVIVP00021594001 0 2 U2 GTAAGCTC..ACAG
Glyma03g35490.1 0 2 U2 GTTAGTGT..GCAG
Glyma19g38130.1 0 2 U2 GTAAGTGT..GCAG
5: 18-18
estExt_gwp_gw1.C_2180063 1 1 U2 GTACGTCT..GTAG
estExt_Genewise1.C_4750009 1 1 U2 GTAAGACA..GCAG
LOC_Os03g29740.1 1 1 U2 GTAAGTAA..TCAG
estExt_Genewise1Plus.C_chr_210320 1 1 U2 GTAAGTTC..CCAG
estExt_fgenesh1_kg.C_chr_10370 1 1 U2 GTAAGTGA..TCAG
AT2G23930.1 1 1 U2 GTAAGTTC..GCAG
estExt_Genewise1_v1.C_LG_XVI2449 2 1 U2 GTAAGCTC..GCAG
GSVIVP00021594001 1 1 U2 GTAAGTTC..GCAG
Glyma03g35490.1 1 1 U2 GTAAGTTT..GCAG
Glyma19g38130.1 1 1 U2 GTAAGTCT..GCAG
6: 59-59
estExt_gwp_gw1.C_2180063 2 0 U2 GTATGTCT..GTAG
estExt_Genewise1.C_4750009 2 0 U2 GTGAGGCC..GCAG
LOC_Os03g29740.1 2 0 U2 GTAAGCCT..GCAG
estExt_Genewise1Plus.C_chr_210320 2 0 U2 GTGAGTAT..GCAG
estExt_fgenesh1_kg.C_chr_10370 2 0 U2 GTAAGTTT..GCAG
AT2G23930.1 2 0 U2 GTAAGTCT..GCAG
estExt_Genewise1_v1.C_LG_XVI2449 3 0 U2 GTGAGTCA..GCAG
GSVIVP00021594001 2 0 U2 GTAGGTTA..GCAG
Glyma03g35490.1 2 0 U2 GTGAGTCC..GCAG
Glyma19g38130.1 2 0 U2 GTGAGTCC..GCAG
Pp~estExt_gwp_gw1.C_2180063
Pp~estExt_Genewise1.C_4750009
Os~LOC_Os03g29740.1
Sb~estExt_Genewise1Plus.C_chr_210320
Zm~GRMZM2G057865_T01
Sb~estExt_fgenesh1_kg.C_chr_10370
At~AT2G23930.1
At~AT3G11500.1
Pt~estExt_Genewise1_v1.C_LG_XVI2449
Vv~GSVIVP00021594001
Gm~Glyma03g35490.1
Gm~Glyma19g38130.1
Mt~AC150442_9.2
VIRGNSVVMIEALEVV-----
VIRGNSVVMIEALEAVR----
VVRGNSVVMIEALEPVPKSQ-
VIRGNSVVMIEALEPVAKAQ-
VIRGNSVVMIEALEPVAKSQ-
VIRGNSVVMIEALEPVAKSQQ
VIRGNSIVTVEALEPVGRSS-
VIRGNSIVTVEALEPVGRS--
MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV
VIRGNSVVTVEALEPVSRMQ-
VIRGNSVVTVEALEPVNRT--
VIRGNSVVTVEALEPVNRT--
VIRGNSVVTVEALEPVNRSI-
Pp~estExt_gwp_gw1.C_2180063
Pp~estExt_Genewise1.C_4750009
Os~LOC_Os03g29740.1
Sb~estExt_Genewise1Plus.C_chr_210320
Zm~GRMZM2G057865_T01
Sb~estExt_fgenesh1_kg.C_chr_10370
At~AT2G23930.1
At~AT3G11500.1
Pt~estExt_Genewise1_v1.C_LG_XVI2449
Vv~GSVIVP00021594001
Gm~Glyma03g35490.1
Gm~Glyma19g38130.1
Mt~AC150442_9.2








VIRGNSVVTVEALEPVTRTQ-VIRGNSVVTVEALEPVNRAQ-






3' UTR introns