SRGD Gene ID 465 BLASTp at NCBI n/a n/a  
OrganismsOs ,At ,Gm ,Pt ,Sb ,Lj ,Vv ,Zm ,Pp
Gene count14
Cintron count12
Cintron classesU2 ,em ,absent ,im
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 MEKGAPSSLFVNDGSFMEKFKQLQQGNGKEQ---EKDKGAAEKDSKPKTIVSGSVTPKPS
MDKGAPSSLFVNDGSFMEKFKQLQQGNGKEQ---EKDKGAAEKDSKPKTIVSGTVTPKPS
MDKGAPPSIFVNDGSFMERFRQLQQEKDK-----DKDKVVQVEDSKPVKIIS---NPKPA
------------------------------------------------------------
MEKGAAPSLFVNDGSFMERFKQLQQENEK-----EKGKGAKLEEPKQRMVVPATSTPNSI
MDKGVPPSLFVNDGSFMERFKQLQQEQ-------EKGKNVKLEDSKPIKVNSGSLSPNHS
MDKGVPPSLFVNDGSFMERFKQLQQEQ-------DKGKNVKLEDSKPIKVISGSLSPNPS
MDKGPPHSLFVNDGSFMARFKQLQQEQ-------GKGKNTKLEDSKPIKVVSRPLTPNPS
---MADKGLFANDGSFMERFKQMQEKEKEKAAAASSSAAAAAKATNPKPVVVAANTP--S
---MADKGLFANDGSFMERFKQMQEKEKEKAAAASSSAAAAAKATNPKPVVVAANTP--S
----MDKGLFTNDGSFMERFKQMQQEAQEKEKAAAAAASSAPKHANPKQGFAVAANK---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 FGKVTMQLKANDGRKTPPTASGGKLAFSLKQKSKLMAPAVKLGEDEEDEDEVDAVNASGD
FGKVTMQFKTNDASKTSQTASSGKLAFSLKQKSKLVAPAVKLGEDDEDEDEADAVNTSGG
ANKISIGLKPNDAQK-----KGGKLAFSLKQKSKLLAPPVKLG-TEEDEDDEDVKHEQGF
------------------------------------------------------------
PSKTNNVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPPVKLG-ADEDEEETDAGNLSSD
ITKTPVDLKVNDTRKTSQGGSSGKLAFSLKQKSKLVPPPVKLS-ADED-EETEAGYVSND
FTKTPVDLKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLS-ADEDEEETEAGYVSND
IGKAT------DARKTSQAGSSGKLAFSLKQKSKLVPPPIKL--TDEDEEETNAGDVSND
ASKRPLELKGGEVKKAGSISSGAKLAFSLK-KNKVAVAPVKFAADDEDEEDVGADREE--
ASKRPLELKGGEVKKAGSISSGAKLAFSLK-KNKVAVAPVKFAADDEDEEDVGADREE--
--------RPFELKKAAPVASSGKLAFSLK-KAKVAVAPV-FSADDEDEDAADVEREE--
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 VSAKRQKLGQLDTSEQSSRRLD-VAPPPPSDPTVKNVADKLASFVAKHGRQFENVTRQKN
VSAKRQKLGQLDASEQSLKRLD-VAPPPPSDPTVKNVADKLASFVAKHGRQFENVTRQKN
GSVKRQKLEQRDTPVKSAKVSD-VAPPPPSDPTVKKVADKLASFVAKHGRPFEHITRQKN
---------------------------------VKKVADKLALFVAKNGRQFEEITRRKN
APMKRQKLGQKDSSEHPSPQVD-VAPPSPSDPAVKKVADKLASFVAKNGRQFEDVTRQRN
APLKRQKLGQEEGIDQSSRQLD-VAPHSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKN
APLKRQKLGQEEGIDQSSRQLD-VAPHSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKN
APSKRQKLGQDDDAEQSSRPLD-VAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKN
-PVKRQKYAQPEAPASVAALSGVVAPSPPNDMTVKQVADKLANFVAKNGRQFENVTRQRN
-PVKRQKYAQPEAPASVAALSGVVAPSPPNDMTVKQVADKLANFVAKNGRQFENVTRQRN
-PAKRQKSVQADAPVAAAPSGA-VAPPPPNDITVRQVADKLASFVAKNGRQFENITRQRN
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
2: 143-143
gw1.I.1893.1 0 1 U2 GTAATTAC..GCAG
estExt_fgenesh4_pg.C_LG_IX0951 0 1 U2 GTAATTAC..GCAG
AT3G52120.1 1 1 U2 GTAATGCC..GCAG
GSVIVP00008843001 0 1 U2 GTAATTAC..GCAG
Glyma08g16200.1 1 1 U2 GTAATTAC..GCAG
Glyma15g42690.1 1 1 U2 GTAATTAC..GCAG
chr3.LjT46L11.80.nc 0 1 U2 GTAATTAC..GCAG
LOC_Os09g10930.1 1 1 U2 GTAATCAT..GCAG
LOC_Os09g10930.2 1 1 U2 GTAATCAT..GCAG
e_gw1.2.20313.1 0 1 U2 GTAATCAT..GCAG
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 PGDTPFKFLFDENCADFKYYEYRLAEEEKALSQSRDSQISSSG--YTSASKSTGSYQSLQ
PGDTPFKFLFDENCADFKYYQYRLAEEEKALSQNRDSHISSSGGTSTSASKSTGSSRRSQ
PGDTPFKFLFDENCADYKYYVFRLAEEEKLISQTKDSGVLHSGDAGSRTSTAAIPLQKPA
PGNTPFSFLYDMESVEYKYYLHRVAQEEAVLAS--EVGAFQTSNSGGGSSNQSNSWRQSS
PGDTPFKFLFDEGCADYKYYEYRLAEEEKTLSQTRDSQTSQSGGTSTSAPKSTSGSQRSV
PGDTPFKFLFDERCAEYKYYEYRLAQEEDALGQSRESQVPRNGGTSTSSSKQASGHQRSS
PGDTPFKFLFDERCAEYKYYEYRLAQEENALVQSRESQVPRNGGTSTSSSKQTNGHQRSS
PGDTPFKFLFDERCADYKYYEYRLGQEEKTLLQYREPQAIHYG-TSISSSRPANGPQRSS
PGDTPFKFLFDKNCSDYKYYEFRLAEEEMLLAQSKEAQASKHASSSTPSSRAPSAPQRSS
PGDTPFKFLFDKNCSDYKYYEFRLAEEEMLLAQSKEAQASKHASSSTPSSRAPSAPQRSS
PGDTPFKFLFDKHCSDYKYYEFQLAEEERALAQSKEAEASKSANSGIASFKAPGGTHRSS
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
3: 185-185
gw1.I.1893.1 1 2 U2 GTTAGTCA..GCAG
estExt_fgenesh4_pg.C_LG_IX0951 1 2 U2 GTGAGTCA..GCAG
AT3G52120.1 2 2 U2 GTATGTAT..CCAG
GSVIVP00008843001 1 2 U2 GTATGTTT..ACAG
Glyma08g16200.1 2 2 U2 GTAAGTAT..GCAG
Glyma15g42690.1 2 2 U2 GTAAGTAT..GCAG
chr3.LjT46L11.80.nc 1 2 U2 GTATGTTT..GCAG
LOC_Os09g10930.1 2 2 U2 GTATGCAG..TCAG
LOC_Os09g10930.2 2 2 U2 GTATGCAG..TCAG
e_gw1.2.20313.1 1 2 U2 GTACGACT..GCAG
4: 221-222
gw1.I.1893.1 2 2 U2 GTACTTTG..CAAG
estExt_fgenesh4_pg.C_LG_IX0951 2 1 U2 GTCAGTCC..ATAG
AT3G52120.1 3 1 U2 GTAAGTAT..CCAG
GSVIVP00008843001 2 1 U2 GTGGTACT..ATAG
Glyma08g16200.1 3 1 U2 GTTAGTAT..TCAG
Glyma15g42690.1 3 1 U2 GTTAGTAT..TCAG
chr3.LjT46L11.80.nc 2 1 U2 GTTAGTTT..CTGG
LOC_Os09g10930.1 3 1 U2 GTTTGTGA..TCAG
LOC_Os09g10930.2 3 1 U2 GTTTGTGA..TCAG
e_gw1.2.20313.1 2 1 U2 GTTCGTGG..GCAG
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 -QQHSNYQIPASALYDDAEELKGSMST------SSGRTGNSTYHAPAGTDPIAMMEFYMK
-QQQSNYQIPASALYEAAEEPKGSLST------SSGRAGESS--APAGTDPIEMMEFYMK
-YQQTGYQIPASALYDTPVEPGASSRSAQASITRPSDSDSFS--GPRGADPLSMMEFYMK
EGQQLRYQTPASALYSGGSEHQRPSFSSGYN--Q----------HPYANDSVAMMEFYTK
-QQRSNYQIPTSALYEATEDTRASGSSVQAA--LAGRAGESS--APTGADPIAMMEFYMK
--QQHTYQIPASALYESPDNPRASGFSIQTS--PVGSSEEPS--GSSNADSLALMEFYMK
--QQHTYQIPASALYESADNPRASGFSIQTS--SVGSSEEPS--GSSNADSLALMEFYMK
-EQRPTYQIPASALYESGDVPRTSGSSVQAL--SVVSSAEPS--GSSNADSLALMEFYMK
FEQKTNYQTPASALYGAYEGSSSQGSSSGY--------------GEPPKDPVALMEFYMK
FEQKTNYQTPASALYGAYEGSSSQGSSSGY--------------GEPPKDPVALMEFYMK
FEQKSNYQTPASALYGAYEGSSSQGSSSSYANLVAGDH------MTPPSDPVALMEFYAK
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
5: 269-269
LOC_Os09g10930.1 4 1 U2 GTAAATTA..GCAG
LOC_Os09g10930.2 4 1 U2 GTAAATTA..GCAG
e_gw1.2.20313.1 3 1 U2 GTAAAAGT..CTAG
6: 276-277
estExt_fgenesh4_pg.C_LG_IX0951 3 1 U2 GTAATAGC..GCAG
AT3G52120.1 4 1 U2 GTATGTTC..GCAG
GSVIVP00008843001 3 1 U2 GTTATGGT..GTAG
Glyma08g16200.1 4 1 U2 GTAATTGT..GCAG
Glyma15g42690.1 4 1 U2 GTAATTGT..GCAG
chr3.LjT46L11.80.nc 3 1 U2 GTAAGGGA..GCAG
7: 282-282
gw1.I.1893.1 3 2 U2 GTATGCAA..CTAG
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 KAAHEERRRQPKHSKDEMPPPASLQGYYMLCVQRNC-----------------LSKKGHH
KAAQEERRRQPKLSKDEMPPPASLQAA--------------------------SSLKGHH
KAAQEEKMRRPRQSKDEMPPPASLQGPSETSSTD-------------------PGKRGHH
KAAQEALRKPPKQSKDEMPPPPGLHPPP-------------------------SGKKGHH
KAAQEERRRQPKQSKDEMPPPASLQT---------------------------PGKKGHH
KAAREEKYKQPKHSKDEMPPPASLLG-----------------------------KKGHH
KAAREEKYKQPKHSKDEMPPPASLLG-----------------------------KKGHH
KAAREERSKQPKQSKDEMPPPASLQG-----------------------------KKGHH
KAAQEERKRPPKQSKDEMPPPPSLQAP--------------------------SSKKGHH
KAAQEERKRPPKQSKDEMPPPPSLQAP--------------------------SSKKGHH
KAAQEERKRPPRQSKDEMPPPPSLQGTSATLLSLLKEC---------------PPKKGHH
-----------------MPPPPSLQG---------------------------PPKKGHH
-----------------MPPPPSLQG---------------------------PPKKGHH
-----------------MPPPPSLQGTYTTLFSLLKECRSFNVYSSTTNSCAGPPKKGHH
8: 324-327
estExt_fgenesh4_pg.C_LG_IX0951 4 1 U2 GTATATGC..ACTG
AT3G52120.1 5 1 U2 GTGAGAAT..TCAG
GSVIVP00008843001 4 1 U2 GTTTGTAT..CCAG
Glyma08g16200.1 5 1 U2 GTTAAAAT..CCAG
Glyma15g42690.1 5 1 U2 GTTAAAAT..CCAG
chr3.LjT46L11.80.nc 4 1 U2 GTACAAAT..TCAG
LOC_Os09g10930.1 5 1 U2 GTACCCTT..GCAG
LOC_Os09g10930.2 5 1 U2 GTACCCTT..GCAG
9: 334-336
gw1.I.1893.1 4 1 U2 GTGGTCTC..GCAG
e_gw1.2.20313.1 4 1 U2 GTACAAAC..GCAG
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 MGDYIPPVELEKFLSTCNDAAARKAATEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSR
MGDYIPPEELEKFLATCNDVAATKAAKEAAERARIQADNVGHKLLSKMGWKEGEGLGSSR
MGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSR
MGDYIPPEELEKFLAKCNDA---KAAKATAGRAKIQADNVGHRLLSKMGWKEGEGLGSGR
MGDYIPQEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGHKLLSKMGWKEGEGLGSSR
MGDFIPPEELEKFLATCNDAAAQKAAREAAERAKIQADNVGHRLLSKMGWKEGEGLGGSR
MGDFIPPEELEKFLATCNDAAAQKAAMEAAERAKIQADNVGHRLLSKMGWKEGEGLGGSR
MGDYIPLEELEKFMASCNDAGAQKVLKETAEKAKIQADNVGHKLLSKMGWKEGEGLGGSR
MGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
MGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
MGDFIPPEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
MGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
MGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
MGDFIPQEELEKFMARCNDAAAQKATKEAAEKAKIQADNIGHKLLSKMGWREGEGLGSER
10: 411-411
gw1.I.1893.1 5 1 U2 GTCCCCCC..TCAG
estExt_fgenesh4_pg.C_LG_IX0951 5 1 U2 GTTCTGAG..TCAG
AT3G52120.1 6 1 U2 GTGCTTAC..ACAG
GSVIVP00008843001 5 1 U2 GTTCTACA..GCAG
Glyma08g16200.1 6 1 U2 GTGCTTTG..CCAG
Glyma15g42690.1 6 1 U2 GTGCTTTG..CCAG
chr3.LjT46L11.80.nc 5 1 U2 GTGCTGTA..CCAG
LOC_Os09g10930.1 6 1 U2 GTTAGTCC..GCAG
LOC_Os09g10930.2 6 1 U2 GTTAGTCC..GCAG
e_gw1.2.20313.1 5 1 U2 GTTTGTCC..GTAG
Pt~gw1.I.1893.1
Pt~estExt_fgenesh4_pg.C_LG_IX0951
At~AT3G52120.1
Pp~e_gw1.2.614.1
Vv~GSVIVP00008843001
Gm~Glyma08g16200.1
Gm~Glyma15g42690.1
Lj~chr3.LjT46L11.80.nc
Os~LOC_Os09g10930.1
Os~LOC_Os09g10930.2
Sb~e_gw1.2.20313.1
Zm~GRMZM2G384327_T01
Zm~GRMZM2G384327_T03
Zm~GRMZM2G384327_T02
 NGISNPIMAGDVKKDHLGVGAHNPGEVTADDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY
SGISNPIMAGNVKKDHLGVGAHNPGEVSPDDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY
KGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQYKKRMMLGYKHRPNPLGNPRKAYY
RGMADPVQAGSVKVNNLGVGAEQPGEVTAEDDIYEQYKKRMMLGYRFRPNPLNNPRKAYY
NGIADPIMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
KGIADPIMAGNVKKNNLGVGAQEPGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
KGIADPIMAGNVKKNNLGVGAQEPGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
KGISDPIMAGNVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY
SGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
SGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
RGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKSYY
RGRADPVMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKSYY
RGRADPVMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKSYY
RGRADPVMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKSYY
11: 471-471
gw1.I.1893.1 6 0 U2 GTATTATC..GCAG
estExt_fgenesh4_pg.C_LG_IX0951 6 0 U2 GTATTATC..ACAG
AT3G52120.1 7 0 U2 GTATTTTA..ACAG
GSVIVP00008843001 6 0 U2 GTATAACC..ACAG
Glyma08g16200.1 7 0 U2 GTAAAAAA..GCAG
Glyma15g42690.1 7 0 U2 GTAAACAA..GCAG
chr3.LjT46L11.80.nc 6 0 U2 GTAAATGA..ACAG
LOC_Os09g10930.1 7 0 U2 GTATGTTG..ACAG
LOC_Os09g10930.2 7 0 U2 GTATGTTG..ACAG
e_gw1.2.20313.1 6 0 U2 GTATATTG..GCAG


3' UTR introns