SRGD Gene ID 463 BLASTp at NCBI n/a n/a  
OrganismsGm ,Zm ,Pp ,Lj ,Sb ,Pt ,Os ,At
Gene count14
Cintron count18
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
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MTWDDIYGDDIADVMTVPTSTMSLESAFSLAGRVIEERHQRLTSDMVEVLSCIKDWPNTL
MTWDDIYGDDIADVMTVPTSTMSLESAFSLAGRVIEERHQRLTSDMVEVLSCIKDWPNTL
MTWDDIYGDDIADVMTVPTSTMSLESAFSLAGRVIEERHQRLTSDMVEVLSCIKDWPNTL
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2: 11-11
GRMZM2G413193_T03 0 1 U2 GTAGTAGT..AAAG
GRMZM2G413193_T01 0 1 U2 GTAGTAGT..AAAG
GRMZM2G413193_T02 0 1 U2 GTAGTAGT..AAAG
3: 54-54
GRMZM2G413193_T03 1 1 U2 GTGAGTTA..TTAG
GRMZM2G413193_T01 1 1 U2 GTGAGTTA..TTAG
GRMZM2G413193_T02 1 1 U2 GTGAGTTA..TTAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
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SCRTWTATKYLDCAQGGRAGPTRDGQRVVPGRAQIVSGDIFGYCSEGALHRGGEPPDVGS
SCRTWTATKYLDCAQGGRAGPTRDGQRVVPGRAQIVSGDIFGYCSEGALHRGGEPPDVGS
SCRTWTATKYLDCAQGGRAGPTRDGQRVVPGRAQIVSGDIFGYCSEGALHRGGEPPDVGS
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4: 102-102
GRMZM2G413193_T03 2 0 U2 GTATGTCC..ATAG
GRMZM2G413193_T01 2 0 U2 GTATGTCC..ATAG
GRMZM2G413193_T02 2 0 U2 GTATGTCC..ATAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
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VGTRDSAYGPSQSLTRMGLLAIDRPSHLMVLELSKGFHWQGFRAQQSLVSLAPTPLATET
VGTRDSAYGPSQSLTRMGLLAIDRPSHLMVLELSKGFHWQGFRAQQSLVSLAPTPLATET
VGTRDSAYGPSQSLTRMGLLAIDRPSHLMVLELSKGFHWQGFRAQQSLVSLAPTPLATET
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Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
----------------YYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
RSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
RSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
RSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQ
-------------MPRYYCDYCDTHLTHDSPSVRKQHCAGYKHKANVRQYYQQFEEQQTQ
----------------------------MQPSVRKQHCAGYKHKANVRQYYQQFEEQQTQ
5: 194-194
AT4G03120.1 0 2 U2 GTATAGGG..GCAG
LOC_Os02g16640.1 0 2 U2 GTGAGTAT..GCAG
fgenesh1_pg.C_chr_4001097 0 2 U2 GTGAGTGC..GCAG
estExt_fgenesh1_pg.C_chr_42362 0 2 U2 GTGAGTGC..GCAG
GRMZM2G413193_T03 3 2 U2 GTGAGTGC..GCAG
GRMZM2G413193_T01 3 2 U2 GTGAGTGC..GCAG
GRMZM2G413193_T02 3 2 U2 GTGAGTGC..GCAG
estExt_Genewise1_v1.C_LG_III1414 0 2 U2 GTACAACC..GCAG
Glyma02g17120.1 1 2 U2 GTACATTA..GCAG
Glyma02g17120.2 0 2 U2 GTACATTA..GCAG
Glyma10g02680.1 0 2 U2 GTACATTA..ACAG
estExt_fgenesh1_pg.C_1550066 0 2 U2 GTTAGTCT..GCAG
6: 209-209
AT4G03120.1 1 0 U2 GTAAGTTT..TCAG
LOC_Os02g16640.1 1 0 U2 GTGAGTTT..GCAG
fgenesh1_pg.C_chr_4001097 1 0 U2 GTTAGTAG..GCAG
estExt_fgenesh1_pg.C_chr_42362 1 0 U2 GTTAGTGT..GCAG
GRMZM2G413193_T03 4 0 U2 GTTAGTGT..GCAG
GRMZM2G413193_T01 4 0 U2 GTTAGTGT..GCAG
GRMZM2G413193_T02 4 0 U2 GTTAGTGT..GCAG
estExt_Genewise1_v1.C_LG_III1414 1 0 U2 GTAAGTTC..TCAG
Glyma02g17120.1 2 0 U2 GTAAGTTG..GCAG
Glyma02g17120.2 1 0 U2 GTAAGTTG..GCAG
Glyma10g02680.1 1 0 U2 GTAAGTTG..GCAG
estExt_fgenesh1_pg.C_1550066 1 0 U2 GTGAGTCT..GTAG
7: 223-223
AT4G03120.1 2 0 U2 GTACATAA..TCAG
LOC_Os02g16640.1 2 0 U2 GTATCTAT..CTAG
fgenesh1_pg.C_chr_4001097 2 0 U2 GTATTTAT..CTAG
estExt_fgenesh1_pg.C_chr_42362 2 0 U2 GTATTTAT..CTAG
GRMZM2G413193_T03 5 0 U2 GTATTTAT..GTAG
GRMZM2G413193_T01 5 0 U2 GTATTTAT..GTAG
GRMZM2G413193_T02 5 0 U2 GTATTTAT..GTAG
estExt_Genewise1_v1.C_LG_III1414 2 0 U2 GTACTTTT..TTAG
Glyma02g17120.1 3 0 U2 GTACCATG..TCAG
Glyma02g17120.2 2 0 U2 GTACCATG..TCAG
Glyma10g02680.1 2 0 U2 GTACCGTG..TCAG
estExt_fgenesh1_pg.C_1550066 2 0 U2 GTGAGATG..TCAG
fgenesh1_pg.scaffold_267000046 0 0 U2 GTGAGAAA..TCAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
SLIDQRIKEHLGQAAAF---QQVGVAYN-HL---------M-----VPRPGG----PPLL
SLIDQRIKEHLGQTGGY---QQVGAVFNQHM---------------LARPRP-----PMM
SLIDQRIKEHLGQAAAF----QVGAPFNQHL---------LSFPGGVPRPRL-----PIL
SLIDQRIKEHLGQAAAF----QAGAPFNQHM---------LTFPGAVARPRL-----PIL
SLIDQRIKEHLGQAAAF----QAGAPFNQHM---------LAFPGAVARPRL-----PIL
SLIDQRIKEHLGQAAAF----QAGAPFNQHL---------LAFPGAMARPRL-----PIL
SLIDQRIKEHLGQAAAF----QAGAPFNQHL---------LAFPGAMARPRL-----PIL
SLIDQRIKEHLGQAAAF----QAGAPFNQHL---------LAFPGAMARPRL-----PIL
SIIDQRIKEHLGQTAAF---QQVGAAYNQHL---------M-----VQRPRL-----PVL
SLIDQRIKEHLGQAAAF---QQVGVAYN-HL---------M-----VQRPNL----PPVL
SLIDQRIKEHLGQAAAF---QQVGVAYN-HL---------M-----VQRPNL----PPVL
SLIDQRIKEHLGQAAAF---QQVGVAYN-HL---------M-----VQRPNL----PPVL
SLIDQKVKEHLGQTAAALAQQQVGGAVYSHLATLGGGYKPMAAPGLLRPPVLAAVRPPVL
SLIDQKVKEHLGQTAAALAQQQVGGAVYSHLAGMGGGYKPMAASGLLRPPMLAAVRPPVL
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
PMPQPRFPMPGNVQMPGGQPLMPGMRPLMPLPRPVPGAPGEYICADSF------------
L-PPGSMPM--------------GMRPPV-LPRPMMPPQG-YMPPPGV-------PQ---
--PTPGMPL-GVPQVP-GAPLMPGVRPPI-LPAP--GIPG-YPGAPNV--------P---
--PTPGMPH-GFPQAP-GAPLMPGVRPPI-LPAP--------------------------
--PTPGMPH-GFPQ----APLMPGVRPPI-LPAP--GVPG-YPGAPPTMPQPGAPPG---
--PTPGMPH-GFPQAP-GAPLMPGIRPPI-LPAP--GKQGCY------------------
--PTPGMPH-GFPQAP-GAPLMPGIRPPI-LPAP-----G-YPGPPPTMQQPGAPPG---
--PTPGMPH-GFPQAP-GAPLMPGIRPPA-------------------------------
--PTPVMPIGGN-----NAPLFPGMRPPV-LPRPMPGAPG-YMNPPMM-------PP---
--PPPRLPIPGNAQIPGSQPLMPGMRPPV-FPRP-PGAPG-YVSAPTM-------PP---
--PPPRLPIPGNAQIPGSQPLMPGMRPPV-FPRP-PGAPG-YVSAPTM-------PP---
--PPPRLPIPGNAQIPGGQPLMQGMRPPV-FPRP-PGAPG-YVSAHTM-------PP---
--PPPSGPSSGY-----GSGALPSYRPPV-VPPPGGSSNQYYNNNGPSQYSTSNGAPQYS
--PPPSGPASGY-----GSGALPSYRPPV-VQPPGSGSTQYYNGPSQLQYSTSNGASQYS
8: 309-309
estExt_fgenesh1_pg.C_1550066 3 1 U2 GTATAATT..TCAG
fgenesh1_pg.scaffold_267000046 1 1 U2 GTACAACT..TCAG
9: 325-325
GRMZM2G413193_T02 6 1 U2 CCCCGATT..GCAC
10: 333-333
GRMZM2G413193_T01 6 1 U2 GTAAACAG..TCAG
11: 338-338
AT4G03120.1 3 1 U2 GTAATTTC..GCAG
LOC_Os02g16640.1 3 1 U2 GTAACAGA..TCAG
estExt_fgenesh1_pg.C_chr_42362 3 1 U2 GTAAACAG..TCAG
estExt_Genewise1_v1.C_LG_III1414 3 1 U2 GTAAACTG..CCAG
Glyma02g17120.1 4 1 U2 GTGAATTT..ACAG
Glyma02g17120.2 3 1 U2 GTGAATTT..ACAG
Glyma10g02680.1 3 1 U2 GTGAATTT..ACAG
12: 357-357
estExt_fgenesh1_pg.C_1550066 4 0 U2 GTTAATGC..GCAG
fgenesh1_pg.scaffold_267000046 2 0 U2 GTTAGTCC..GCAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
--------------------------------PDLYKLPSLLIEAFNLAWDVFMFSVSHL
---MMAPPGAP---LPPPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNGLP
---TMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPP-----TSGAPGAPIPNSGA
----------------------------------------------------------GI
---SMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPP-----TSGVPGAPIPNSAA
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---SMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPP-----TSGVPGAPIPNSGA
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---MMAPPGAP------------SLPGQMNGIPRPPTMIAQPNVPGSTAAPTPSGPPSMG
---MLPPPGAP------------QAPGQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMV
---MLPPPGAP------------QAPGQLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMV
---MLPPPGAP------------QVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMV
VNNSLVPQSYSSSSSGAQSQYMSSANGGQAQYQTSSGANGIPRSFFSDDEFKAFLAGRCG
VNNSSVPQSYSSSSTGAQSQYVSSINGGQAQYQTSSGGSQQ--QQYSNGPTRAPIPSTYN
13: 396-396
estExt_fgenesh1_pg.C_1550066 5 1 U2 GTACCCAG..GCAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
ETSCFL---------------------SN--------------------LKKTIRSVMVY
PPPPYH---------------------TN---P----------------AAPPSGNFNNP
PPAMYQ---------------------TN---PPQPAGPTSGAPPPVSAPPPAAPPQAPF
PEYWYT-------------------------------------------------RYLPY
PPAIYQ---------------------AN---PPAPAGPTSGAP-----PAPPTAPQPAF
---LYH---------------------SL-------------------------------
PPAIYQ---------------------AN---PQASAGPTSGAP-----PAPPTAPQPAF
---IYQ---------------------AN---PQASAGPTSGAP-----PAPPTAPQPAF
PPVTYQ---------------------AN---Q----------------AATTSGGFDSF
SSAMYQ---------------------AN---P----------------PAPSSGSYDNY
SSAMYQ---------------------AN---P----------------PAPSSGSYDNY
SSAMYQ---------------------AN---P----------------PAPSSGSYDNY
ADSLVECLSNWKGVVEDNGNRFGTELVSNYFMVSESYTASSRRLVKIILYVEQEGSTGSV
PGPAYQRCSLTRLAILLFLAFVMKCVQEN---PVAYMSSIKGTEVQY--HKGTGGFQQPF
14: 420-420
fgenesh1_pg.C_chr_4001097 3 1 U2 GTAAACAG..ATAG
estExt_fgenesh1_pg.C_1550066 6 1 U2 GTAGTGTT..GTAG
15: 425-425
fgenesh1_pg.scaffold_267000046 3 2 U2 GTAGACTG..CCAG
16: 444-444
estExt_fgenesh1_pg.C_1550066 7 0 U2 GTATCTTC..CTAG
17: 465-465
estExt_fgenesh1_pg.C_1550066 8 0 U2 GTTTGTTC..AAAG
Lj~LjSGA_022586.1
At~AT4G03120.1
Os~LOC_Os02g16640.1
Sb~fgenesh1_pg.C_chr_4001097
Sb~estExt_fgenesh1_pg.C_chr_42362
Zm~GRMZM2G413193_T03
Zm~GRMZM2G413193_T01
Zm~GRMZM2G413193_T02
Pt~estExt_Genewise1_v1.C_LG_III1414
Gm~Glyma02g17120.1
Gm~Glyma02g17120.2
Gm~Glyma10g02680.1
Pp~estExt_fgenesh1_pg.C_1550066
Pp~fgenesh1_pg.scaffold_267000046
VY------GAKCLDVT--------------
NLNNPNPSAESPESNE--------------
SY------AQPPEGNH--------------
VS----------------------------
SY------ALPSEGNH--------------
------------------------------
SY------APPSEGNH--------------
SY------APPSEGNH--------------
NVN-----AAAPEANH--------------
NAS-----AQAPEGNH--------------
NAS-----AQAPEGNH--------------
NTS-----AQAPEGNH--------------
SIKPWRFSAAVIPLNHTVSTPSTYNQGLAC
SIESTV--CLRHQHTTKDWCVKDRMMRAKC


3' UTR introns