SRGD Gene ID 418 BLASTp at NCBI n/a n/a  
OrganismsPt ,Zm ,Sb ,Gm ,Vv ,At ,Os ,Lj
Gene count15
Cintron count12
Cintron classesU2 ,absent ,im ,em
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Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
------------------------------------------------------------
MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL
MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL
MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL
MESDQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAV
MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAVV
MDSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVL
---DQGKLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVL
---DQGKLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVL
MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
--------------VDAKRAFSREDQQISVTSRAGNPN--------SGMNSG------NG
DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSN--------SGMNSG------NG
DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSN--------SGMNSE------NG
DRVLQEKHSIDTREVDVKRAMSREEQQ--VSGRTGNLN--------TSRSSG------GD
DAALVDPHTLDGRTVDVKRALSREEQQ---AAKAANPSAGGRHASGGGGGGGGAGGGGGG
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNTG-----GGN
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNTG-----GGN
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNSG--GGGGGG
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNSG--GGGGGG
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNSG--GGGGGG
DRALQDPHTLDGRTVDVKRALSREEQQ---ASKAANPS--------GGRNTGGAGGGGGG
DAVLQEKHTIDGRTVEAKRALSREEQH---TSRPGNSN--------TGRSSS-----GMG
DMVLQDKHTIDGRMV-------KEQQT---NARAGNLN--------PARNTS------GG
DRVLQDTHTIDGRTV-------KEQQT---NARAGNLN--------PARNTS------SG
DRVLQEKHIIDGRTVEAKRALSREEQQ--TSSRAGNFN--------SARNSG------GG
1: 73-74
Glyma10g33320.1 0 0 U2 GTAACTAA..TCAG
Glyma20g34330.1 0 0 U2 GTAACGCT..ACAG
AT4G14300.1 0 0 U2 GTTATTAT..TTAG
LOC_Os10g33230.1 0 0 U2 GTATCCCC..GTAG
GRMZM2G176918_T02 0 0 U2 GTATGGCA..TCAG
GRMZM2G167505_T01 0 0 U2 CAGGACCC..TTTC
GRMZM2G167505_T02 0 0 U2 CAGGACCC..TTTC
GRMZM2G167505_T03 0 0 U2 CAGGACCC..TTTC
estExt_Genewise1.C_chr_14280 0 0 U2 GTATGGCA..TCAG
GSVIVP00028534001 0 0 U2 GTGAGGGA..TCAG
gw1.VIII.2545.1 0 1 U2 GTTAAAGC..AGAG
GSVIVP00020328001 0 0 U2 GTGAATCA..TCAG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
G-----NVRTKKIFVGGLPPTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPQGFGFISFD
G-----NIRTKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFD
G-----NIRTKKIFVGGLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFD
A-----YNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD
GGGDAGGARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFD
GGGDANGARTKKIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFD
GGGDANGARTKKIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFD
GGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFD
GGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFD
GGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFD
GAGDASGARTKKIFVGGLPSTLTEDGFRQYFQTFGSVTDVVVMYDQNTQRPRGFGFITFD
G-----NFKTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFD
G-----NIRTKKIFVGGLPPTLTEDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFISFD
G-----NIRTKKIFVGGLPPTLTDDGFRQYFEAFGLVTDVVIMYDQSTQRPRGFGFISFD
G-----NVKTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFD
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
NEDAVDRVLHKSFHDLNGKQVEVKRALPKDANPGASGRMMGGAGGGGAGIGGYQGYGASG
TEDAVDRVLHKSFHDLNGKQVEVKRALPKDANPGA-----SGRMMGGAGGGGYQGYGASG
TEEAVDRVLHKSFHDLNGKQVEVKRALPKDANPGASGRMMGGAGGGGAGIGGYQGYGASG
SEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGG-----GGRSMGG---GGSGGYQGYG
AEDAVDRVLHKTFHDLSGKMVEVKRALPREANPGSGS---GGRSMGG-GGGGYQSNNGPN
SEDAVDHVLQKTFHDLGGKLVEVKRALPREANPGGSG---SGRSGVS---GGYQSNNGHN
SEDAVDHVLQKTFHDLGGKLVEVKRALPREANPGGSG---SGRSGVS---GGYQSNNGHN
SEDAVDRVLQKTFHDLGGKLVEVKRALPREANPGGSG---GGRSGGG---GGYQSNNGHN
SEDAVDRVLQKTFHDLGGKLVEVKRALPREANPGGSG---GGRSGGG---GGYQSNNGHN
SEDAVDRVLQKTFHDLGGKLVEVKRALPREANPGGSG---GGRSGGG---GGYQSNNGHN
SEDAVDRVLHKTFHDLGGKLVEVKRALPREANPGGSS---GGRSGGS---GGYQSNNGHN
TEDAVDRVLHKTFHDLNGKLVEVKRALPKDANPGG-----GGRS------GGYQGYGASG
TEDAVDRVLQRSFHDLNGKQVEVKRALPKEANPGG-----GGRSMGG-------------
SEDAVDRVLQRTFHDLNGKQVEVKRALPKEANPGG-----GGRSMGG-------------
TEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGG-----GSRSMGG-GAGGYQGYGASG
2: 229-229
GSVIVP00020328001 1 1 U2 GTGCGGTT..GCAG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
GSQNAYDGRMDSSRYMQPQS--AAGGFPPYGSSAYSA--PGYGYGSANNGIGYGAYG--S
GNQNAYDGRMDSSRYMQPQS--AAGGFPPYGSSAYSA--PGYGYGPASNGIGYGAYG--S
GSQNAYDGRMDSSRYMQPQS--AAGGFPPYGSSAYSA--PGYGYGPANNGIGYGAYG--S
GNESSYDGRMDSNRFLQHQS--VGNGLPSYGSSGYGA-----GYGNGSNGAGYGAYG--G
SNSGGYDSRGDASRYGQAQQ--GSGGYPGYGAGGYGAGTVGYGYGHANPGTAYGNYGAGG
TSSGSYDGRSDGGRYGQAQQ--GSGVYP-----GYGAGAAGYGYG-ANPAIGYGNYGAGG
TSSGSYDGRSDGGRYGQAQQ--GSGVYP-----GYGAGAAGYGYG-ANPAIGYGNYGAGG
TSSGSYDGRSDGGRYGQTQQGSGGGGYPGYGAGGYGAGAAGYGYG-ANPAVGYGNYGAGG
TSSGSYDGRSDGGRYGQTQQGSGGGGYPGYGAGGYGAGAAGYGYG-ANPAVGYGNYGAGG
TSSGSYDGRSDGGRYGQTQQGSGGGGYPGYGAGGYGAGAAGYGYG-ANPAVGYGNYGAGG
TSSGSYDGRSDGGRYGQAQQ--GSGGYPGYGAGGYGAGAAGYGYG-ANPAVGYGNYGAGG
ANT----------KWMVIDS----CHLRPLVVVSHHILAMVHQVMAMEQQIVLLVMVVMG
------------------------------------------------------------
------------------------------------------------------------
GNPTTYDGRMDSNRYMQPQN--TGGGFPPYVHLAMGMVLPIMVWDMVVMVVTVALLV---
3: 242-242
GSVIVP00028534001 1 1 U2 GTGCATAT..GTAG
4: 269-269
GSVIVP00020328001 2 1 U2 GTTCTTCT..ACAG
5: 292-292
GSVIVP00020328001 3 0 U2 GTGCCAAT..GGAG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
YGGATAGYGGPAAATYGNPKCPLMLLMIEF------------------------------
YGGATAGYGGPAAATYGNPNVPNAAYAGGPPGGPRSTWPAQAPSGYGSMGYGNTAAWGAP
YGSATAGYGGPAGATYGNPNVPNAAYAGGPPGGPRSSWPAQAPSGYGSMGYGNTAAWGAP
YTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGY
FGGVPAGYGG----HYGNPNAPGSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAW
YGGAPAAYGG----HYGNPGAAGSGYQGGPPGSNRGPWGSQAPSAYGTGGYGGSAGYSAW
YGGAPAAYGG----HYGNPGAAGSGYQGGPPGSNRGPWGSQAPSAYGTGGYGGSAGYSAW
YGGVPAAYGG----HYGNPGAAGSGYQGGHPGSNRGPWGSQAPSAYGTGGYGGSAGYSAW
YGGVPAAYGG----HYGNPGAAGSGYQGGHPGSNRGPWGSQAPSAYGTGGYGGSAGYSAW
YGGVPAAYGG----HYGNPGAAGSGYQGGHPGSNRGPWGSQAPSAYGTGGYGGSAGYSAW
YGGVPAAYGG----HYGNPGAAGSGYQGGPPGSNRGPWGSQAPSAYGT------------
VMVANTGFGGPAG-AYGNPNAPNAGYVSGPPGAMKSQWNNQTPSGYGASGYATGP----W
--------------SY--------------------------------------------
--------------SY--------------------------------------------
---HPMETQM----SQMLVMQVDHLKFMELSSTLRIWWCGLWKCCF--------LGFKRW
6: 301-301
GSVIVP00028534001 2 2 U2 GTTGGTGG..GAAG
7: 324-324
GSVIVP00020328001 4 0 U2 GTGCCCCT..CTAG
8: 350-350
GSVIVP00028534001 3 1 U2 GTTCAAAT..GGAG
9: 359-359
GSVIVP00020328001 5 2 U2 GTGGTGCT..GAAG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
------------------------------------------------------------
SGGAGSGGGGPGSATAGQSPGGAAGYGNQGYGYGGYGGYGGSDSSYGNSGAYGTVGGRTG
SGGAGSGGGGPGSATAGQSPGGAAGYGNQGYGYGGYAGYGGSDSSYGNSSAYGTVGGRTG
---GVPG-AAPPT----QSP---SGYSNQGYGYG---GYSGSDSGYGNQAAYGVVGGRPS
NNSSAGG-NAPTS----QAAGAGTGYGSQGYGYG---GYGGD-ASYGNHGGYGGYGGRGD
NNSSGGG-NAPTS----QAPGGPAGYGSQGFGYG---GYGGD-PSYGSHGGYGAYGARSD
NNSSGGG-NAPTS----QAPGGPAGYGSQGFGYG---GYGGD-PSYGSHGGYGAYGARSD
NNSSGGG-NALNS----QAPGGPAGYGSQGYGYG---GYGGD-PSYASHGGYGAYGARID
NNSSGGG-NALNS----QAPGGPAGYGSQGYGYG---GYGGD-PSYASHGGYGAYGARID
NNSSGGG-NALNS----QAPGGPAGYGSQGYGYG---GYGGD-PSYASHGGYGAYGARID
------------------------------------------------------------
NAPGGAGVSGPMG----QSPSGASGYGSQGFGYG---NYGGSDGSYS--GGYGAAGGRAG
------------------------------------------------------------
------------------------------------------------------------
--CGGTG-SASSG----QSPSGAAGYGNQSYGYG---GYGGSEGSYANPTGYGAVGGRTG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
------------------------------------------------------------
SAPNNNASASGGSELTSSGGSGNYMGGGYGDANGNSGYGNAAWRSEQTHASGNYGTP--Q
SGPNSNASAPGGTELTSSGGSGNYMGGGYGDANGNSGYGNAAWRSEQTHASGNYGTP--Q
GGGSNNPGSGG------------YMGGGYGDG---------SWRSDPSQG----------
GAG--NPAAGGGS---G-------YGAGYGSGNGGSGYPN-AW-ADPSQG-GGFGASVNG
GAG--NPATGGAS---G-------YGAGYGSGGANSGYSS-AW-SDPSQG-GGFGGSVNG
GAG--NPATGGAS---G-------YGAGYGSGGANSGYSS-AW-SDPSQG-GGFGGSVNG
SAG--NPATGGSS---G-------YNAGYGSGGANSGYSS-AW-SDPSQG-GGFGGSVNG
SAG--NPATGGSS---G-------YNAGYGSGGANSGYSS-AW-SDPSQG-GGFGGSVNG
SAG--NPATGGSS---G-------YNAGYGSGGANSGYSS-AW-SDPSQG-GGFGGSVNG
------------------------------------------------------------
SAPSSGGSASGEQGTGG-----GYMGSGYGDANGNQGYSNAGWRSDPSQG----------
------------------------------------------------------------
------------------------------------------------------------
SGP--NSNAGGGE---LQGSGGGYMGGGYGDANGNSGYGNAAWKSDPSQASGNYGAQTNG
Lj~LjSGA_099738.1
Gm~Glyma10g33320.1
Gm~Glyma20g34330.1
At~AT4G14300.1
Os~LOC_Os10g33230.1
Zm~AC198361.3_FGP004
Zm~GRMZM2G176918_T02
Zm~GRMZM2G167505_T01
Zm~GRMZM2G167505_T02
Zm~GRMZM2G167505_T03
Sb~estExt_Genewise1.C_chr_14280
Vv~GSVIVP00028534001
Pt~gw1.X.4570.1
Pt~gw1.VIII.2545.1
Vv~GSVIVP00020328001
---------------------------------------------
GNGGQVGYGVGYGGAQSRQAQQQ----------------------
GNGGQVGYGGGYGGAQSRQAQQQ----------------------
-------YGGGYNDGQGRQGQ------------------------
VSEGQSNYGSGYGGVQPRVAQ------------------------
GSEGQSNYGTGYGSVQPRVAQ------------------------
GSEGQSNYGTGYGSVQPRVAQ------------------------
GAEGQSTYGTGYGSVQPRVAQ------------------------
GAEGQSTYGTGYGSVQPRVAQ------------------------
GAEGQSTYGTGYGSVQPRVAQ------------------------
---------------------------------------------
----AAGYGGGYGGAQRQAQQQ-----------------------
---------------------------------------------
---------------------------------------------
PHGGQCSVPTSPAAVVLLTSVSNRFIIFANPFPFLLMWVIMRGWS
10: 484-484
GSVIVP00020328001 6 0 U2 GTTGGCTA..ATAG
11: 520-520
GSVIVP00020328001 7 0 U2 GTTTCTTA..GCAG


3' UTR introns