SRGD	Gene ID 415	BLASTp at NCBI	n/a	n/a		Organisms At ,Zm ,Pp ,Lj ,Vv ,Sb ,Pt ,Os ,Gm Gene count 15 Cintron count 5 Cintron classes U2 ,im ,absent
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	---MDALKAEL-----------ERKRKATSEVSKGRKF-VRRGEIDQRELERKKEQEKKE MREQRVWGRDLQFVMMGHLAPIILRKQHMKFQYKVKVISIRRFDLGLTITGEKIDQSASM ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRHEEHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRLD-EHRQ ---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ ---MDLLREEI-----------LKKRKSLAEESGGKKF-FKRSEIEQKKIQKLREEERRE ---MDLLKQEL-----------LKKRQTLAQDTGGKKF-FKRSEIQQKEIQKLREQEKRE ---MDLLKQEL-----------LKKRQSLAQEAGGKRF-FKRSEIEQRNIQKLREQEKRE ---MDLLKQEL-----------LKKRQSLAEETGGKKF-FKRSEIQQKQIQKLREQEKRE ---MDLLKQEL-----------LKKRQSLAQDTGGKKF-FKRSEIQQKEIQKLREQEKRE ---MDLLKQEL-----------LKKRQSLAQDTGGKKF-FKRSEIQQKEIQKLRQQEKRE	2: 59-59 GRMZM2G053642_T01 0 0 U2 GTGAGGAT..TTAG
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	LLEKAK-KKAAPGT------QDSSAAGTDASVSAPAAAKLSSKSKEV----G-------- LLAKA----------------GTSAPSANSAAAATV------------------------ LLSKAP-PATSSASAAG---SDPSNPNADPAQSSAANPNPNSSSSAA----AASVPPGLA LLAKASASAPSPDSAAAATGSDTSNPDAAAQAAAANPNPSSSSSASS----APSVPPALA LLAKA----------------GTSAPSANSAAAATG------------------------ LLAKS--GGTSAPSANSAAAATGSDPSSFDAAAQTAAANPNPSSSAAATSSAPSVPPALA LLAKA----------------GTSAPSANSAAAATG------------------------ LLAKA----------------GTSTPSANSAAAATG------------------------ LLAKA----------------GTSAPSANSAAAATG------------------------ HELKAQ-RRAAAAASGGDGKSSGSAPGSSNAATSASSKSSASDAAAI----AD------- LEAKSK-RQSSSSSITSS--STTTTPNSSVAASTATTTTTKNSSSTA----TTSKPL--- LEAKAL-RHNNGTASS----STAAAASATSTPSSDAKPDLTSSSSKA----I-------- LEAKSL-KRPSD--------TSATAPSASASASASTDATSTP------------------ LEAKSQ-KRLATSSD-----NAATAPSSSSTASASASSTIASSSAAS----L-------- LEAKSL-KRLATSSD-----TAATAPSSSSTASSSASSTIASASASL-------------
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	-----------SEEETLDELELPRAEVIRRLRYLKQPVTLFGEDDDDRLARLKALLKAGM -----------SEERRIDELDLPQHEVVRRLRVLREPITLFGEDDDARLARFKLVLKSGV GKKTAQDEALLSEERRIDELDLPRHEVVRRLRILREPVTLFGEDDADRLARLKFVLKSGV PKKTTQEEALLSEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV -----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGI PKKTAQEEALLSEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV -----------SEERRIDELDLPRHEVVRR-----EPVTLFGEDDDARLSRFKLVLKSGV -----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGENDDARLARFKLVLKSGV -----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV -----------SKALTDENLILPRQEVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGL -----------TVEQNIDNLVLPKQEVIRRFRFLKQPITLFGEDDDARLDRLKYVLKAGL -----------TDEQKIDEMVLPKQEVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGI -----------TNEQNIDNLVLPKQEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKTGL -----------TNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGV -----------TDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGV
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	---TDPDSELMEGQRNDFLVDMAELRKREKHGRLEPRKEKNKEKDGGDDGDRDGGGGGEQ ---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKSV---DGGDGGAAGGSAD IDDID-DLDMTEGQTNDFLRDMVELRKRQRAGRDTYVKGKGKRAGGGDGGEGGAGGDNAD IDDID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKGKRVGGGDGGDGGAAGDSAD ---ID-DIDMIEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV-----DDGGAAGGSAD IDDID-DIDMTEGQTNDFLRDMIEMRKRQKSGRDTYAKGKSKRVGGGDGGDGGAAGDSAD ---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV-----DDGGAAGGSAD ---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV---DGGDWGAAGGSAD ---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV---DGGDWGAAGGSAD ---FEVDSDMTEGQTNDFLRDIAELKKRQKSG---MMGDRKRKSRDERGRDEGDRGETRE ---FEVDSDMTEGQTNDFLRDIAELRKRQKSG---IVSGRKRKDREDGGGEDGEGGEGDG ---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILSDRKRKN---------------D ---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---IMSDRKRQKPDDGAAEAREGGD--D ---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILGERKRQKADDGAAEDREGGAGDD ---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILGERKRQKADDGAAQDREGGAGDD	3: 222-222 GSVIVP00023725001 0 1 U2 GTCCGGAG..GGAG
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	NITGDG--GFSSGIDNDKDVKRLKANFDELSDEDKILVFFKRLLLEWEQELENRPEAEQR DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDGDGRRS-GDDADADKDSKRMKTKFEELCDEDKILVFFKKLLIEWNQELDEMPELEKR DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDAKG--S-GDDANADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDAKG--S-GDDANADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDAKG--S-GDDVDADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DGDAKG--S-GDDVDADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR DELSGG--E-SSDVDADKDMKRLKANFEDLCDEDKILVFYKKLLIEWKQELDAMENTERR ELGGEC--G-AGGGDNDLDSKRMKANFEELCEEDKILVFFKRLLNEWNQELDEMAEAEKR DLSGDG--G-SSGVDADKDLKRMKANFEELCDEDKILVFFKRLLIEWNQELNEKQEGEKR DDLSEG----SSGPDADKDLKRMKANFDELCDEDKILVFFKKLLNEWKQELHEMPEAQRR DLSDCG--G-SDGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKR DLSDCG--S-SEGAEADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKR	4: 260-260 estExt_gwp_gw1.C_3420016 0 0 U2 GTACATAT..GCAG
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	TGRGKSSVATFKQCARYLKPLFKMCRKKILPDDIRTALMIIVKNCMERDYLTAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRQALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPHDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL TAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKL TAKGKSMVATFKQCARYLNPLFDFSRKKILPSDIRQGLLLMVECCMRRDYLAAMDHYIRL TAKGKSMVATFKQCARYLNPLFKFCRKKVLQDDIRQALLVVVECCMKRDYLAAMDQYIKL TAKGKSNVATFKQCARYLNPLFRFCRKKVLGDDIRQALMLMVDCCMKRDYLAAMDHYIRL TAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMRRDYLAAMDHYIKL TAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKL	5: 327-327 estExt_gwp_gw1.C_3420016 1 0 U2 GTAAGTGC..ACAG GRMZM2G053642_T01 1 0 U2 GTATTAAT..TTAG LOC_Os07g38420.1 0 0 U2 GTGAGAAT..TTAG Sb02g036950 0 0 U2 GTATGAAT..TTAG GRMZM2G046916_T01 0 0 U2 GTATTGAT..TTAG GRMZM2G053622_T01 0 0 U2 GTATTGAT..TTAG GRMZM2G034709_T01 0 0 U2 GTATTGAT..TTAG GRMZM2G034651_T01 0 0 U2 GTATTGAT..TTAG eugene3.00051177 0 0 U2 GTGAGTGC..GTAG GSVIVP00023725001 1 0 U2 GTCAGTAT..GTAG chr4.LjT06I07.140.nd 0 0 U2 GTAACTAT..TCAG Glyma03g31130.1 0 0 U2 GTATTTTC..TCAG Glyma19g33970.1 0 0 U2 GTGAGTTT..ACAG
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPSM AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL TIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIHTNNVAHIMNDETTRKYLQSIKRLMTLSQQRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTM AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTM AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTM AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL
Pp~estExt_gwp_gw1.C_3420016 Zm~GRMZM2G053642_T01 Os~LOC_Os07g38420.1 Sb~Sb02g036950 Zm~GRMZM2G073041_T01 Zm~GRMZM2G046916_T01 Zm~GRMZM2G053622_T01 Zm~GRMZM2G034709_T01 Zm~GRMZM2G034651_T01 At~AT1G03140.1 Pt~eugene3.00051177 Vv~GSVIVP00023725001 Lj~chr4.LjT06I07.140.nd Gm~Glyma03g31130.1 Gm~Glyma19g33970.1	PSKSVEFNSLANGSDLKSLLTEEKNKTGSV--AAEERLRLLAARDEDR-- PSKSVEFNSLANGSDLQALLSVENGSAK----ASEERLRLMPAYAFAD-- PSKSVEFNSLANGSDLQALLSEEKDPGNP---PSEDRLRLMPASKE---- PSKSVEFNSLANGSDLQALLSEENGSGK----ASEERLRLMPASKE---- PSKSVEFNSLSNGSDLQALLSAENGSAK----ASEERLRFMPSQTRLDFK PSKSVEFNSLANGSDLQALLSEENGSGK----ASEERLRLMPALKE---- PSKSVEFNSLANGSDLQALLSEENGSAK----ASEERLRLMPAYAFAN-- PSKLVEFNSLANGSDLQALLSK---------------------------- PSKSVEFNSLANGSDLQALLSEENGSAK----ASEERLRFMPAYAFVD-- PSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPSQSES--- PSKAVEFNSLANGSDLQSLLAEERVFDGNQ--PSEGRLRLMPAPDEN--- PSKAVEFNSLANGSDLQSLLAEERFSGGNQ--ASEERLHLMAPPKES--- PSKAVEFNSLANGSDLQSLLAEERLKGGNQ--TSEERLRIMPAPRES--- PSKAVEFNSLANGSDLHSLLAEERFSGGNQA-ASEERLRIMPAPRDS--- PSKAVEFNSLANGSDLHSLLAEERFSGGNQ--ASEERLRIMPAPRDI---