SRGD Gene ID 415 BLASTp at NCBI n/a n/a  
OrganismsAt ,Zm ,Pp ,Lj ,Vv ,Sb ,Pt ,Os ,Gm
Gene count15
Cintron count5
Cintron classesU2 ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
---MDALKAEL-----------ERKRKATSEVSKGRKF-VRRGEIDQRELERKKEQEKKE
MREQRVWGRDLQFVMMGHLAPIILRKQHMKFQYKVKVISIRRFDLGLTITGEKIDQSASM
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRHEEHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRLD-EHRQ
---MDLLKREL-----------EKKRKAATADFGGKSF-VRRSELEQKQLQKRRD-EHRQ
---MDLLREEI-----------LKKRKSLAEESGGKKF-FKRSEIEQKKIQKLREEERRE
---MDLLKQEL-----------LKKRQTLAQDTGGKKF-FKRSEIQQKEIQKLREQEKRE
---MDLLKQEL-----------LKKRQSLAQEAGGKRF-FKRSEIEQRNIQKLREQEKRE
---MDLLKQEL-----------LKKRQSLAEETGGKKF-FKRSEIQQKQIQKLREQEKRE
---MDLLKQEL-----------LKKRQSLAQDTGGKKF-FKRSEIQQKEIQKLREQEKRE
---MDLLKQEL-----------LKKRQSLAQDTGGKKF-FKRSEIQQKEIQKLRQQEKRE
2: 59-59
GRMZM2G053642_T01 0 0 U2 GTGAGGAT..TTAG
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
LLEKAK-KKAAPGT------QDSSAAGTDASVSAPAAAKLSSKSKEV----G--------
LLAKA----------------GTSAPSANSAAAATV------------------------
LLSKAP-PATSSASAAG---SDPSNPNADPAQSSAANPNPNSSSSAA----AASVPPGLA
LLAKASASAPSPDSAAAATGSDTSNPDAAAQAAAANPNPSSSSSASS----APSVPPALA
LLAKA----------------GTSAPSANSAAAATG------------------------
LLAKS--GGTSAPSANSAAAATGSDPSSFDAAAQTAAANPNPSSSAAATSSAPSVPPALA
LLAKA----------------GTSAPSANSAAAATG------------------------
LLAKA----------------GTSTPSANSAAAATG------------------------
LLAKA----------------GTSAPSANSAAAATG------------------------
HELKAQ-RRAAAAASGGDGKSSGSAPGSSNAATSASSKSSASDAAAI----AD-------
LEAKSK-RQSSSSSITSS--STTTTPNSSVAASTATTTTTKNSSSTA----TTSKPL---
LEAKAL-RHNNGTASS----STAAAASATSTPSSDAKPDLTSSSSKA----I--------
LEAKSL-KRPSD--------TSATAPSASASASASTDATSTP------------------
LEAKSQ-KRLATSSD-----NAATAPSSSSTASASASSTIASSSAAS----L--------
LEAKSL-KRLATSSD-----TAATAPSSSSTASSSASSTIASASASL-------------
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
-----------SEEETLDELELPRAEVIRRLRYLKQPVTLFGEDDDDRLARLKALLKAGM
-----------SEERRIDELDLPQHEVVRRLRVLREPITLFGEDDDARLARFKLVLKSGV
GKKTAQDEALLSEERRIDELDLPRHEVVRRLRILREPVTLFGEDDADRLARLKFVLKSGV
PKKTTQEEALLSEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV
-----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGI
PKKTAQEEALLSEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV
-----------SEERRIDELDLPRHEVVRR-----EPVTLFGEDDDARLSRFKLVLKSGV
-----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGENDDARLARFKLVLKSGV
-----------SEERRIDELDLPRHEVVRRLRVLREPVTLFGEDDDARLARFKLVLKSGV
-----------SKALTDENLILPRQEVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGL
-----------TVEQNIDNLVLPKQEVIRRFRFLKQPITLFGEDDDARLDRLKYVLKAGL
-----------TDEQKIDEMVLPKQEVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGI
-----------TNEQNIDNLVLPKQEVIRRLRFLKQPVTLFGEDDDARLDRLKHVLKTGL
-----------TNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGV
-----------TDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGV
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
---TDPDSELMEGQRNDFLVDMAELRKREKHGRLEPRKEKNKEKDGGDDGDRDGGGGGEQ
---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKSV---DGGDGGAAGGSAD
IDDID-DLDMTEGQTNDFLRDMVELRKRQRAGRDTYVKGKGKRAGGGDGGEGGAGGDNAD
IDDID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKGKRVGGGDGGDGGAAGDSAD
---ID-DIDMIEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV-----DDGGAAGGSAD
IDDID-DIDMTEGQTNDFLRDMIEMRKRQKSGRDTYAKGKSKRVGGGDGGDGGAAGDSAD
---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV-----DDGGAAGGSAD
---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV---DGGDWGAAGGSAD
---ID-DIDMTEGQTNDFLRDMIEMRKRQKAGRDTYAKGKSKRV---DGGDWGAAGGSAD
---FEVDSDMTEGQTNDFLRDIAELKKRQKSG---MMGDRKRKSRDERGRDEGDRGETRE
---FEVDSDMTEGQTNDFLRDIAELRKRQKSG---IVSGRKRKDREDGGGEDGEGGEGDG
---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILSDRKRKN---------------D
---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---IMSDRKRQKPDDGAAEAREGGD--D
---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILGERKRQKADDGAAEDREGGAGDD
---FEVDSDMTEGQTNDFLRDIAELRKRQKTG---ILGERKRQKADDGAAQDREGGAGDD
3: 222-222
GSVIVP00023725001 0 1 U2 GTCCGGAG..GGAG
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
NITGDG--GFSSGIDNDKDVKRLKANFDELSDEDKILVFFKRLLLEWEQELENRPEAEQR
DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDGDGRRS-GDDADADKDSKRMKTKFEELCDEDKILVFFKKLLIEWNQELDEMPELEKR
DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDAKG--S-GDDANADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDAKG--S-GDDADADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDAKG--S-GDDANADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDAKG--S-GDDVDADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DGDAKG--S-GDDVDADKDSKRMRTKFEELCNEDKILVFFKKLLNEWNQELDEMTELEKR
DELSGG--E-SSDVDADKDMKRLKANFEDLCDEDKILVFYKKLLIEWKQELDAMENTERR
ELGGEC--G-AGGGDNDLDSKRMKANFEELCEEDKILVFFKRLLNEWNQELDEMAEAEKR
DLSGDG--G-SSGVDADKDLKRMKANFEELCDEDKILVFFKRLLIEWNQELNEKQEGEKR
DDLSEG----SSGPDADKDLKRMKANFDELCDEDKILVFFKKLLNEWKQELHEMPEAQRR
DLSDCG--G-SDGADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKR
DLSDCG--S-SEGAEADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKR
4: 260-260
estExt_gwp_gw1.C_3420016 0 0 U2 GTACATAT..GCAG
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
TGRGKSSVATFKQCARYLKPLFKMCRKKILPDDIRTALMIIVKNCMERDYLTAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRQALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPHDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKSMVATFKQCARYLSPLFEFCRKKVLPDDIRRALLVIVECCMKRDYLAAMDQYIKL
TAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKL
TAKGKSMVATFKQCARYLNPLFDFSRKKILPSDIRQGLLLMVECCMRRDYLAAMDHYIRL
TAKGKSMVATFKQCARYLNPLFKFCRKKVLQDDIRQALLVVVECCMKRDYLAAMDQYIKL
TAKGKSNVATFKQCARYLNPLFRFCRKKVLGDDIRQALMLMVDCCMKRDYLAAMDHYIRL
TAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMRRDYLAAMDHYIKL
TAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKL
5: 327-327
estExt_gwp_gw1.C_3420016 1 0 U2 GTAAGTGC..ACAG
GRMZM2G053642_T01 1 0 U2 GTATTAAT..TTAG
LOC_Os07g38420.1 0 0 U2 GTGAGAAT..TTAG
Sb02g036950 0 0 U2 GTATGAAT..TTAG
GRMZM2G046916_T01 0 0 U2 GTATTGAT..TTAG
GRMZM2G053622_T01 0 0 U2 GTATTGAT..TTAG
GRMZM2G034709_T01 0 0 U2 GTATTGAT..TTAG
GRMZM2G034651_T01 0 0 U2 GTATTGAT..TTAG
eugene3.00051177 0 0 U2 GTGAGTGC..GTAG
GSVIVP00023725001 1 0 U2 GTCAGTAT..GTAG
chr4.LjT06I07.140.nd 0 0 U2 GTAACTAT..TCAG
Glyma03g31130.1 0 0 U2 GTATTTTC..TCAG
Glyma19g33970.1 0 0 U2 GTGAGTTT..ACAG
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPSM
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL
TIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIHTNNVAHIMNDETTRKYLQSIKRLMTLSQQRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLSQRRYPAL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTM
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTM
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTM
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL
AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTL
Pp~estExt_gwp_gw1.C_3420016
Zm~GRMZM2G053642_T01
Os~LOC_Os07g38420.1
Sb~Sb02g036950
Zm~GRMZM2G073041_T01
Zm~GRMZM2G046916_T01
Zm~GRMZM2G053622_T01
Zm~GRMZM2G034709_T01
Zm~GRMZM2G034651_T01
At~AT1G03140.1
Pt~eugene3.00051177
Vv~GSVIVP00023725001
Lj~chr4.LjT06I07.140.nd
Gm~Glyma03g31130.1
Gm~Glyma19g33970.1
PSKSVEFNSLANGSDLKSLLTEEKNKTGSV--AAEERLRLLAARDEDR--
PSKSVEFNSLANGSDLQALLSVENGSAK----ASEERLRLMPAYAFAD--
PSKSVEFNSLANGSDLQALLSEEKDPGNP---PSEDRLRLMPASKE----
PSKSVEFNSLANGSDLQALLSEENGSGK----ASEERLRLMPASKE----
PSKSVEFNSLSNGSDLQALLSAENGSAK----ASEERLRFMPSQTRLDFK
PSKSVEFNSLANGSDLQALLSEENGSGK----ASEERLRLMPALKE----
PSKSVEFNSLANGSDLQALLSEENGSAK----ASEERLRLMPAYAFAN--
PSKLVEFNSLANGSDLQALLSK----------------------------
PSKSVEFNSLANGSDLQALLSEENGSAK----ASEERLRFMPAYAFVD--
PSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPSQSES---
PSKAVEFNSLANGSDLQSLLAEERVFDGNQ--PSEGRLRLMPAPDEN---
PSKAVEFNSLANGSDLQSLLAEERFSGGNQ--ASEERLHLMAPPKES---
PSKAVEFNSLANGSDLQSLLAEERLKGGNQ--TSEERLRIMPAPRES---
PSKAVEFNSLANGSDLHSLLAEERFSGGNQA-ASEERLRIMPAPRDS---
PSKAVEFNSLANGSDLHSLLAEERFSGGNQ--ASEERLRIMPAPRDI---