SRGD Gene ID 412 BLASTp at NCBI n/a n/a  
OrganismsGm ,At ,Vv ,Os ,Zm ,Pp ,Lj ,Sb ,Pt
Gene count15
Cintron count16
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
MVRLTADLILRSSQYFNAVRERELDLRGNKIGVIENLGATEDQYASIDLSDNEIVKLEGF
MVRLSADLILRSPQYFNAVREREVDLRGNKIGVIENLGAIEDQYASIDLSDNEIVKLEGF
MVRVTADLILRSPQYFNAVRERELDLRGNKIGVIENLGATEDQYASIDLSDNEIVKLEGF
MVRLTADLIWKSPHFFNAVKDRELDIRGNKIPIIENLGATEDQFDTIDLSDNEIVKLENF
MVRLTADLIWKSPHFFNAVKERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLENF
MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENF
MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF
-------------------------------CLID-------------------CQLENI
MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV
MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV
MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV
MVRLTADLIWKSPHFFNTIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENV
MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENL
MVRLTADLVWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM
MVRLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENM
2: 0-0
AT1G09760.1 0 0 U2 ..
3: 26-26
estExt_fgenesh1_pg.C_1520025 0 1 U2 GTATTGTC..TCAG
gw1.134.46.1 0 1 U2 GTAATTCC..TCAG
estExt_Genewise1.C_490074 0 1 U2 GTACTGTC..GCAG
LOC_Os02g13990.1 0 1 U2 GTTTGCGC..GCAG
estExt_fgenesh1_kg.C_chr_10010 0 1 U2 GTTTGCCC..GCAG
GSVIVP00006250001 0 1 U2 GTATTCCA..TCAG
eugene3.00010586 0 1 U2 GTCTCTTC..GCAG
estExt_fgenesh4_pm.C_LG_III0531 0 1 U2 GTCCCCTC..GCAG
4: 40-40
estExt_fgenesh1_pg.C_1520025 1 0 U2 GTGCGAGA..TCAG
gw1.134.46.1 1 0 U2 GTATAACA..CCAG
estExt_Genewise1.C_490074 1 0 U2 GTATGTAT..TTAG
LOC_Os02g13990.1 1 0 U2 GTGAGCTC..ATAG
estExt_fgenesh1_kg.C_chr_10010 1 0 U2 GTGAGCTC..ACAG
Glyma10g24350.1 2 0 U2 GTGCACAA..GCAG
Glyma10g24350.2 2 0 U2 GTGCACAA..GCAG
Glyma20g18440.1 2 0 U2 GTGCAAAA..GCAG
Glyma20g18440.2 2 0 U2 GTGCAAAA..GCAG
GSVIVP00006250001 1 0 U2 GTGTGTTT..GCAG
eugene3.00010586 1 0 U2 GTACTTCA..CCAG
estExt_fgenesh4_pm.C_LG_III0531 1 0 U2 GTACTACT..CCAG
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
PHLKRLTTLLVNNNRIARINSNIGAALPKLETLVLTNNRLSNLVDLDHLRTLVNLQNLCL
PHLKRLTTLLLNNNRIARINPNIGAALPNLETLVLTNNRLSNLVDLDHLATLKNLQNLCL
PHLKRLTTLLLNNNRIARINPNIGAALPKLETLVLTNNRLSNLVDLDHLATLGNLLNLCL
PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL
PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL
PYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEIDPLASLPKLQFLSL
PYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSL
PYLNRLGTLLINNNRVTRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLQFLSL
PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL
PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL
PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL
PYLNRLGTMLINNNRITRINPNIGEFLPNLHTLVLTNNRIVNLVEIDPLASLPKLHFLSL
PYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSL
PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLINNRLVNLAEIDPLASLPKLHFLSL
PYLNRLGTLIINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSLPKLQFLSL
5: 83-83
estExt_fgenesh1_pg.C_1520025 2 1 U2 GTATTTTC..GCAG
gw1.134.46.1 2 1 U2 GTATTTCT..GCAG
estExt_Genewise1.C_490074 2 1 U2 GTGTTTCC..GCAG
LOC_Os02g13990.1 2 1 U2 GTAAGATT..CTAG
estExt_fgenesh1_kg.C_chr_10010 2 1 U2 GTAAGAAC..GCAG
Glyma10g24350.1 3 1 U2 GTACAGTT..GCAG
Glyma10g24350.2 3 1 U2 GTACAGTT..GCAG
Glyma20g18440.1 3 1 U2 GTACAATT..GCAG
Glyma20g18440.2 3 1 U2 GTACAATT..GCAG
GSVIVP00006250001 2 1 U2 GTAAGCTG..GCAG
eugene3.00010586 2 1 U2 GTCAGCCT..GCAG
estExt_fgenesh4_pm.C_LG_III0531 2 1 U2 GTAAGTTT..GCAG
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
LDNVVTKRPNYRLYLIHKLPKLRLLDFKKVKLKQYMEAFGLEKQEAKKLFAAENGRPAEI
LDNVVTKRPNYRLHLIYKLPKLRLIDFKKVKLK--------EREEAKKLFATENGPPSKA
LDNVVTKRPNYRLHLIHKLPKLRLLDFKKVKLK--------ERQEAKKLFATENGAPAKA
LDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQ--------ERIAAAQKFHSKE--AEEE
LDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQ--------ERVAAAKKFHSKE--AEEE
LDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQ--------ERVAAAKKFHSKE--AEEE
LDNNITKKANYRLYVIHKLKSLRVLDFIKIKAK--------ERAEAASLFSSKE--AEEE
LDNNITKKPNYRLYVISKLDSLRVLDFKKVKNK--------ERLEAKNLFGSEE--AIE-
LDNNITKKPNYRLYVINKLKSLRVLDFKKVKNK--------ERLEAKNLFSSKE--VIEE
LDNNITKKPNYRLYVINKLKSLRVLDFKKVKNK--------ERLEAKNLFSSKE--VIEE
LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNK--------ERLEAKNLFASKE--VIEE
LDNNITKKPNYRLYVINNLKSLRVLDFKKVKNK--------ERLEAKNLFASKE--VIEE
LDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNK--------ERLEAENLFASKE--VEEE
LDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGK--------ERAEAEHLFASKE--VEEE
LDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAK--------ERAEAEHLFSSKE--VEEE
6: 152-152
estExt_fgenesh1_pg.C_1520025 3 0 U2 GTACATAC..TCAG
gw1.134.46.1 3 0 U2 GTACATAC..GCAG
estExt_Genewise1.C_490074 3 0 U2 GTACATTT..GCAG
LOC_Os02g13990.1 3 0 U2 GTTAGCAA..GTAG
estExt_fgenesh1_kg.C_chr_10010 3 0 U2 GTGAGCAA..GTAG
Glyma10g24350.1 4 0 U2 GTAATGTT..ATAG
Glyma10g24350.2 4 0 U2 GTAATGTT..ATAG
Glyma20g18440.1 4 0 U2 GTAATTCC..ATAG
Glyma20g18440.2 4 0 U2 GTAATTCC..ATAG
GSVIVP00006250001 3 0 U2 GTGAGGTT..ATAG
eugene3.00010586 3 0 U2 GTGAGACT..GTAG
estExt_fgenesh4_pm.C_LG_III0531 3 0 U2 GTGAGACT..GCAG
7: 160-160
estExt_fgenesh1_pg.C_1520025 4 0 U2 GTGTTTGT..CCAG
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
PPPPPAKTFVPGEIPSDDVPETIPPEAEEPSRKGPTPEQIIAIKTAIANSQTLEEVARLE
LPPPPAKTFIPGEIPS----------DDIPESIP--AESFLVIQTAIANSQTLEEVARLE
PPPPPAKTFVPGEIPSEDSLEATPVEVEEPSRKGPTPEQIIAIKTAIANSQTLEEVARLE
AKKVPAKTFTPGQVVD---AQDTTMEEQGPKVVAPTPEQITAIKAAIVNSQTLEEVARLE
AKKVPAKTFTPG-LPD---AQDITMEPQGPKVVAPTPEQITAIKAAIANAHTLEEAARLE
AKKVAVKTFTPG-LPD---AQDITMEPQGPKVVAPTPEQITAIKAAIVNAHTLEEAARLE
VKKVSRE-----EVKK---VSETAENPETPKVVAPTAEQILAIKAAIINSQTIEEIARLE
------------------------------------------------------------
IQRTPTKS----ETPN---VSEVIEEQQMPKVVAPTPEQIIAIKAAIVNSQTLEEVARLE
IQRTPTKS----ETPN---VSEVIEEQQMPKVVAPTPEQIIAIKAAIVNSQTLEEVARLE
IQRTPAKTFSTGETPN---VSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLE
IQRTPAKTFSTGETPN---VSEAIEEQQTPKVVAPTPEQIIAIKAAIVNSQTLEEVARLE
AKQEPLKTFTPGEMPN---ALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLE
ARRESVKTFTPGEVPN---VLEGAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEEVARLE
AKRESVKTFTPGEIPN---IPEVAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEEVARLE
8: 217-217
gw1.134.46.1 4 0 U2 GTTGAGGA..GTAG
9: 223-223
estExt_fgenesh1_pg.C_1520025 5 0 U2 GTATTGTA..TCAG
estExt_Genewise1.C_490074 4 0 U2 GTATTGCA..TCAG
LOC_Os02g13990.1 4 0 U2 GTACTATT..GCAG
estExt_fgenesh1_kg.C_chr_10010 4 0 U2 GTAATAAT..GTAG
Glyma10g24350.1 5 0 U2 GTACAATG..GCAG
Glyma10g24350.2 5 0 U2 GTACAATG..GCAG
Glyma20g18440.1 5 0 U2 GTACAATG..GCAG
Glyma20g18440.2 5 0 U2 GTACAATG..GCAG
GSVIVP00006250001 4 0 U2 GTATTATT..GCAG
eugene3.00010586 4 0 U2 GTACTATG..GCAG
estExt_fgenesh4_pm.C_LG_III0531 4 0 U2 GTACTATG..GCAG
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
KALKLGQLPSDIVLPGNDTSGKPVTDTNSDGPP-------------NTQETEETTEMEEG
KALKLGQLPSDIELP---------------------------------------------
KALKLGQLPSDIVLPGEDGSRKSTTDSNIDVPP-------------STQQSEEITAMEEE
KALSTGQIPAEFAIPKPDANMADASEETEKMETDGQNQENGAD---EKKQNEESTPIEED
QVLSTGQVPAEFAVPRPDANMAEASDGAEKMDTDGENQEGGEAD--GQKQGEGSTPIQED
QVLSTGQVPAEFAVPKPDANMAEASEGAEKMDTDGQNQE-GEAD--GQKQDDESTPIQED
QALKFGQVPAGLIIP--------------------------------DPATNDSAPMEE-
------------------------------------------------------------
KALKSGQLPADLLL-------DNVDEKHEDMIHDDRGQADGESNDTQEQRNTDSASMEQD
KALKSGQLPADLLL-------DNVDEKHEDMIHDDRGQADGESNDTQEQRNTDSASMEQD
KALKSGQLPADLISLSDNIMLDNVDEKHEDMIHDDRSQADGKSNDTQEQRNTDSASMEQD
KALKSGQLPADLISLSDNIMLDNVDEKHEDMIHDDRSQADGKSNDTQEQRNTDSASMEQD
KALKSGQLPADLKSLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVEEQKNDDVAPMEQV
KALNSGQLPADLKIL-DGTGSNSVKEQDDKMATDNQNEA--EPNNLEEQKDNEATPMEQE
KALNSGQLPADLKIL-DDTGSNSVKEQDDKMATDSQNEA--EPNNLEEQKDNEATPMEQE
10: 240-240
estExt_fgenesh1_pg.C_1520025 6 0 U2 GTAGCACT..GCAG
gw1.134.46.1 5 0 U2 GTATGAGT..GCAG
estExt_Genewise1.C_490074 5 0 U2 GTACTACT..GCAG
LOC_Os02g13990.1 5 0 U2 GTAGCATG..TTAG
estExt_fgenesh1_kg.C_chr_10010 5 0 U2 GTAATGCC..TCAG
Glyma10g24350.1 6 0 U2 GTGCTTGC..GCAG
Glyma10g24350.2 6 0 U2 GTGCTTGC..GCAG
Glyma20g18440.1 6 0 U2 GTGCCTGC..GCAG
Glyma20g18440.2 6 0 U2 GTGCCTGC..GCAG
GSVIVP00006250001 5 0 U2 GTGCTGTC..GTAG
eugene3.00010586 5 0 U2 GTGCATCT..ACAG
estExt_fgenesh4_pm.C_LG_III0531 5 0 U2 GTGCATCC..ACAG
11: 298-298
estExt_fgenesh1_pg.C_1520025 7 0 U2 GTACTTTT..CCAG
estExt_Genewise1.C_490074 6 0 U2 GTACTTTC..GCAG
LOC_Os02g13990.1 6 0 U2 GTAATGAT..ACAG
estExt_fgenesh1_kg.C_chr_10010 6 0 U2 GTAATGAC..GCAG
Glyma10g24350.1 7 0 U2 GTATATGG..GCAG
Glyma10g24350.2 7 0 U2 GTATATGG..GCAG
Glyma20g18440.1 7 0 U2 GTATATGG..GCAG
Glyma20g18440.2 7 0 U2 GTATATGG..GCAG
eugene3.00010586 6 0 U2 GTATCATT..TCAG
estExt_fgenesh4_pm.C_LG_III0531 6 0 U2 GTATCATT..TCAG
Pp~estExt_fgenesh1_pg.C_1520025
Pp~gw1.134.46.1
Pp~estExt_Genewise1.C_490074
Os~LOC_Os02g13990.1
Zm~GRMZM2G021742_T01
Sb~estExt_fgenesh1_kg.C_chr_10010
At~AT1G09760.1
Lj~LjSGA_002348.1
Gm~Glyma10g24350.1
Gm~Glyma10g24350.2
Gm~Glyma20g18440.1
Gm~Glyma20g18440.2
Vv~GSVIVP00006250001
Pt~eugene3.00010586
Pt~estExt_fgenesh4_pm.C_LG_III0531
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LVCILCGFLAVYFNFICSLTLLFWIRMIWPFLF
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