SRGD Gene ID 350 BLASTp at NCBI n/a n/a  
OrganismsOs ,Sb ,At ,Pp ,Gm ,Pt ,Lj ,Vv ,Mt ,Zm
Gene count16
Cintron count5
Cintron classesU2 ,absent ,im ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 MAEVEEFRCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERS
MAEAEEFRCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERS
MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA
MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA
MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA
MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA
MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA
MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQA
MADVDEYRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQA
MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA
MSDVEEYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKA
MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA
MSEELEYRCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA
MSDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEA
MSDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKA
MSDVEEFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKA
2: 36-36
e_gw1.26.120.1 0 0 U2 GTATGTAT..GCAG
e_gw1.128.62.1 0 0 U2 GTTATCAT..GCAG
LOC_Os03g61990.1 1 0 U2 GTGATATC..GCAG
LOC_Os03g61990.2 1 0 U2 GTGATATC..GCAG
LOC_Os03g61990.3 0 0 U2 GTGATATC..GCAG
LOC_Os03g61990.4 1 0 U2 GTGATATC..GCAG
LOC_Os03g61990.5 1 0 U2 GTGATATC..GCAG
estExt_fgenesh1_pg.C_chr_10207 1 0 U2 GTAACATG..GCAG
AT3G26420.1 1 0 U2 GTAAATTT..ACAG
Glyma08g08050.1 0 0 U2 GTGATCAG..ACAG
gw1.I.15.1 0 0 U2 GTAATCTT..TTAG
chr4.CM0337.690.nc 0 0 U2 GTATCTTA..ACAG
Glyma05g24960.1 0 0 U2 GTGATCAG..ACAG
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 MDEAIERLHGKELDGRPITVNRAKP-K---GRDG-GGD--RG-GGGGGGGGGGGKGGGGG
MEEAIERLHGKELDGRPITVNRAKP-K---GRDG-GGD--RGYGGGGGGG------RGGG
MEDAIEGMNGLDLDGRAITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDFGGG
MEDAIEGMNGLDLDGRAITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDFGGG
MEDAIEGMNGLDLDGRAITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDFGGG
MEDAIEGMNGLDLDGRAITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDFGGG
MEDAIEGMNGLDLDGRAITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDFGGG
MEDAIEGMNGLDLDGRNITVDKAQP-QGP-GRDR-NGD--RDYDRERGSRYERGRDYGG-
MEDAIEGMNGLDLDGRNITVDKAQP-QGP-GRDR-NGD--RDYDRDRGSRYDRGRDYGS-
MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDN-DGD------RGRDRGYDRDRSRPSG
MDEAIDAMNGMDLDGRTITVDRAQPQQGS-TRG--DGD--RYRDRGR----DRDRDHGGG
MEDAIKEMHGMDLDGRSITVDKAQPNQGS-GRDR-DGD--RDRDRGRDRYNDRDRNRDYG
MEDAIEGMNGMDLDGRTITVDKAQPQQGS-SRDL-DGDRSRDRDRDRDRGHDRDRNRDYG
MEEAIEAMNGIDLDGRTITVDKAQP-QG--SRD--DDD--RHRERGRDSR-DRNRSRDYG
MDEAIDAMNGMDLDGRTITVDKAQP-QGS-SRDRDDGDRYRERGRDRDDRGDRDRSRGYG
MDEAIDAMNGIDLDGRTITVDRAQPQQGS-TRD--DGDRYRERGRDR----DRNRDYGGG
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 G--GGGGGGGGDCFKCGQPGHWARECPTGGGDRGGGG-----------------------
G--GGGGGGGGDCFKCGQPGHWARECPSSGGDRGAGG-----------------------
GRAPRGSGGGGDCYKCGKPGHFARECPSGDGGGRGD------------------------
GRAPRGSGGGGDCYKCGKPGHFARECPSGDGGGRGD------------------------
GRAPRGSGGGGDCYKCGKPGHFARECPSGDGGGRGD------------------------
GRAPRGSGGGGDCYKCGKPGHFARECPSGDGGGRGD------------------------
GRAPRGSGGGGDCYKCGKPGHFARECPSGDGGGRGD------------------------
GRAPRG-GGG--------------------------------------------------
GRAPRG-GGGGDCFKCGKPGHFARECPSGD-GGRGD------------------------
G---RG---GGDCFKCGKPGHFARECP-SESSRDGGGRFSSKDDRYSSKDDRYGAKDDRY
G--GRG-SNGGECFNALVKG------P-GEESMVVG------------------------
G--GRG-SNGGECFKCGKPGHFARECPSSEGAR-GG------------------------
G--GRG-SNSGECFKCGKPGHFARECP-SEGAR---------------------------
G--SRG-SNGGECFKCGKPGHFARECP-SEGER-GG------------------------
G--SRG-SNGGECFKCGKPGHFARECP-SEGERGGG------------------------
G--GRG-SNGGECFKCGKPGHFARECP-GEGSR-GG------------------------
3: 133-133
Glyma08g08050.1 1 2 U2 GTGTGGAA..GGAG
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 -------------------RYSGRDR-------------YDSGRLA--------------
-------------------RYSGRDR-------------YDSGRLAAPLYVCM-------
-------------------RYGGRDDRYGGGGGGG--GRYGSDRGGDR-YSGR-------
-------------------RYGGRDDRYGGGGGGG--GRYGSDRGGDR-YSGR-------
-------------------RYGGRDDRYGGGGGGG--GRYGSDRGGDR-YSGR-------
-------------------RYGGRDDRYGGGGGGG--GRYGSDRGGDR-YSGR-------
-------------------RYGGRDDRYGGGGGGG--GRYGSDRGGDR-YSGR-------
----------------------------GGGGVGV--DMY------------R-------
-------------------RYGGRDDRYGGGGGGG--GRYGSERGGDR-YSGR-------
GAKEDRYGAKDDRYSSKDDRYSSKDDRYGSRDGGG--SRYGPDRSGER-AGGR-------
-------------------KVDMVEAVV-----------VVMDQIEQIVLQGGA------
-------------------RYGGRDDKYGGGGGGGSGGRYGPDRNGDR-YGGR-------
------------------------------------------------------------
-------------------RYVGRESRY----SGG----YGPDRNADRSYGGRDRDSGGR
-------------------RYGGRESR---SSGGG----YGPDRNADRSSGGRS------
-------------------RYGGRESRYGGSSGGG----YGPDRNADRSSGGR-------
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 ------------------------------------------------------------
-----------------------------------LR-----------------------
-----------------------------------SRDGGGYGGGGGDR-YSRDRSGPY-
-----------------------------------SRDGGGYGGGGGDR-YSRDRSGPY-
-----------------------------------SRDGGGYGGGGGDR-YSRDRSGPY-
-----------------------------------SRDGGGYGGGGGDR-YSRDRSGPY-
-----------------------------------SRDGGGYGGGGGDR-YSRDRSGPY-
-----------------------------------EKSAALL------------------
-----------------------------------SRDSLVLEKYVPSR-YESLSTIIRL
-----------------------------------SRDGGSRGAPGGER-HSR---APYD
-----------------------------------AGDGGSHGDSGSDR-FYRDRSGPYE
-----------------------------------SKDAGSRGGSGNDR-YSRDRSGPYE
------------------------------------------------------------
DRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDRDRAGPYE
-----------------------------------SRDGGSHGDSGSDR-YHRDRSGPYE
-----------------------------------SRDGGSHGDSGSDR-YYRDRSGPYE
4: 276-276
estExt_fgenesh1_pg.C_chr_10207 2 1 U2 ATGGCGGC..ACTG
Pp~e_gw1.26.120.1
Pp~e_gw1.128.62.1
Os~LOC_Os03g61990.1
Os~LOC_Os03g61990.2
Os~LOC_Os03g61990.3
Os~LOC_Os03g61990.4
Os~LOC_Os03g61990.5
Zm~AC196125.3_FGP002
Sb~estExt_fgenesh1_pg.C_chr_10207
At~AT3G26420.1
Gm~Glyma08g08050.1
Vv~GSVIVP00002259001
Pt~gw1.I.15.1
Mt~AC187356_26.2
Lj~chr4.CM0337.690.nc
Gm~Glyma05g24960.1
 -----------------------------------
-----------------------------------
-----------------------------------
-----------------------------------
-----------------------------------
-----------------------------------
-----------------------------------
-----------------------------------
VIVSGT-----------------------------
RPR--AGGFH-------------------------
RERRGSGGFR-------------------------
RR---------------------------------
-----------------------------------
--RRGSGGHLLNWRVSVLLQLYLLMTVSLDFFMDV
R-RGSSGGYR-------------------------
RERRGSGGFR-------------------------


3' UTR introns