SRGD Gene ID 345 BLASTp at NCBI n/a n/a  
OrganismsAt ,Pp ,Vv ,Os ,Gm ,Zm ,Lj ,Sb ,Pt
Gene count16
Cintron count33
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
MAKSTGKPRAASPSVTTESSSYTGSSSASG---------SRSRSQSSSSS----------
MAKTVGKPRAASPSVTTGSSSYTGSSSASG---------SRSRSPSSSSS----------
MAKLGGKSKAASPSVTSGSSSYSGSSSASG---------SRSRSRSSSSS----------
MAKPRRGRSASRSSSGSSSRSPSRSASSGSGS---SRSRSRSRSFSSSSSPSRSRSPPAA
MAKPRRGRSASRSSSGSSSRSPSRSASSGSGS---SRSRSRSRSFSSSSSPSRSRSPPAA
MAKPRRGRSASRSSSGSSSRSPSHSVSSGSVS---SRSRSRSRSFSSSSSQSR-------
MAKPRRGRSASRSTSGSSSRSPSHSVSSGSVS-------SRSRSFSSSSSQSRSRSPPPA
MAKPRRGRSASRSSSGSSSRSLSHSVSSGSVS---SRSRSRSRSFSSSSSQSRSRSPPQA
MAKPRRGRSASRSSSGSSSRSLSHSVSSGSVS---SRSRSRSRSFSSSSSQSRSRSPPQA
MAKPSRGRRSP-SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSR-------
------------------------------------------------------------
MAKPGRGRRSH---SGSVSGSSSRSSSPSD-----SRSSSRSRSVSRSRSPSRSRSSSPS
MAKPGRGRRSP---SGSVSGSSSRSSSPSD-----SRSSSRSRSLSRSRSPSRSRSSSPS
------------------------------------------------------------
MAKPGRGRPSPPSGSASGSSSRSRSRSYSGSD---SRSSSRSRSPSRSRSFSSSSSQS--
MAKPTRGRPTSRSGSGSGSSSRSRSYSGSD-----SRSSSRSRSVSRSRSRSRSLSSSSS
2: 0-0
AT1G16610.1 0 0 U2 ..
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
-----GSETSRSRSPPAKT----------------------RKLRSSIPESTVLHVGFLT
-----GSEVSGSRSPPAKTSGVSGAKKIRSSSPPPKRISPAKKLRTPTPESTVLHVGCLT
-----GSETSRSRSPPAKSSD--VAKKTRASPPPPTKSSAPKKLRTPTPESTVLHVGCLT
KASSPGARRGRSPSSPAKRGS--PSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLS
KASSPGARRGRSPSSPAKRGS--PSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLS
----------SRSPPPAKRGK------------------------ASPAESAVLCIDHLS
KRSSPGARKGRSPSPPPKKGS--PSKKVRSPSPPPKK-ASPPRKASPPAESVVLCIDHLS
KRSSPGARKGRSPSPPPKKGS--PSKKVRSPSPPLKK-ASPPRKVSPPAESAVLCIDHLS
KRSSPGARKGRSPSPPPKKGS--PSKKVRSPSPPLKK-ASPPRKVSPPAESAVLCIDHLS
-----SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLS
-------------------------------------------KPSPTRESLVLHVEKLS
SSSPSRSSRSRSPPPQRRRSPADAARRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLS
SSSSSRSSRSRSPPPQRRRSPADATRRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLS
------------------------------------------------------------
-----RSVSSRSRSVSPKRKSPEVAKRGRSPPPQSKRTSPPPRKVSPIRESLVLHIGSLS
SPSR-SASSGSRSPPPRKRSPAEGARRGRSPPPQSKKVSPPPRKASPIRESLVLHVDSLT
3: 61-61
LOC_Os01g72890.1 0 2 U2 GTGAGACC..GCAG
LOC_Os01g72890.2 0 2 U2 GTGAGACC..GCAG
GRMZM2G133926_T01 0 2 U2 GTGAGGCC..CCAG
GRMZM2G060540_T01 0 2 U2 GTGAGGCT..CCAG
GRMZM2G060540_T02 0 2 U2 GTGAGGCT..CCAG
4: 77-79
fgenesh1_pg.scaffold_157000058 0 2 U2 GTAGTTTT..ACAG
estExt_fgenesh1_pm.C_350034 0 2 U2 GTAGTCTG..GCAG
estExt_fgenesh1_pg.C_1180104 1 2 U2 GTAATCTA..GCAG
fgenesh1_pg.C_chr_3004174 0 2 U2 GTGAGGCT..TCAG
Glyma08g18310.1 0 2 U2 GTAACGCT..GTAG
Glyma15g40710.1 0 2 U2 GTACTGCT..GTAG
GSVIVP00025760001 0 2 U2 GTTCTTCT..ACAG
estExt_fgenesh4_pg.C_LG_XI1221 0 2 U2 GTGAATTC..AAAG
5: 100-101
estExt_fgenesh1_pm.C_350034 1 2 U2 GTAAGGAA..GCAG
estExt_fgenesh1_pg.C_1180104 2 2 U2 GTAAGTAC..ACAG
LOC_Os01g72890.1 1 2 U2 GTTCAGTT..TCAG
LOC_Os01g72890.2 1 2 U2 GTTCAGTT..TCAG
GRMZM2G133926_T01 1 2 U2 GTATATAA..TCAG
GRMZM2G060540_T01 1 2 U2 GTATATAC..TCAG
GRMZM2G060540_T02 1 2 U2 GTATATAC..TCAG
Glyma08g18310.1 1 2 U2 GTAGTGTG..TCAG
Glyma15g40710.1 1 2 U2 GTAGTGTG..TCAG
GSVIVP00025760001 1 2 U2 GTAACTCA..TCAG
estExt_fgenesh4_pg.C_LG_XI1221 1 2 U2 GTAAATTT..TCAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
RNVSEAHVKEIFVVKSSSFLFEVFSQQFWTRVTFKVNLPKGYGYVEFKTRVDAEKALAHM
RNVNETHLREIFGNYGEIVHVELAMDRT-------VNLPKGYGYVEFKTRVDAEKALAHM
RNVNEAHLKEIFGLYGEIVHVELAMDRT-------VNLPKGYGYVEFKRRGDAEKALAHM
RNVNEAHLKEIFGNFGEVVNVELSMDRM-------VNLPRGYGYIEFKKRTDAEKALLYM
RNVNEAHLKEIFGNFGEVVNVELSMDRM-------VNLPRGYGYIEFKKRTDAEKALLYM
RNVNEAHLKEIFGNFGEIVNVELSMDRM-------VNLPRGYGYIEFKKRADAEKALLYM
RNVNEAHLKEIFGNFGEVVNVELSMDRM-------VNLPRGYGYIEFKKRADAEKALLYM
RNVNEAHLKEIFGNFGEVVNVELSMDRM-------VNLPRGYGYIEFKKRADAEKALLHM
RNVNEAHLKEIFGNFGEVVNVELSMDRM-------VNLPRGYGYIEFKKRADAEKALLHM
RNVNEAHLKEIFGNFGEVIHVEIAMDRA-------VNLPRGHGYVEFKARADAEKAQLYM
RNVNEGHLKEIFSNYGEVVSVELAMDRI-------VNLPKRIAYVPFRARGDAKKALLYM
RNVNEGHLKEIFSNFGEVISVELAMDRT-------VNLPKGYGYVQFKTRGEAEKALLYM
RNVNEGHLKEIFSNFGEVISVELAMDRT-------VNLPKGYGYVQFKTRGDAEKALLYM
-------------NYGEVVSVELAMDRI-------VNLPKGYAYVQFKARGDAEKALLYM
RNVNEGHLKEIFSNFGEVVHVELAMDRT-------VNLPKGYGYVEFKTRSDAEKAQLYM
RNVNEGHLREIFSNFGEVVHVELAMDRT-------VNLPKGFGYVEFKTRADAEKALLYM
6: 131-131
fgenesh1_pg.scaffold_157000058 1 1 U2 GTAAGTAT..GAAG
estExt_fgenesh1_pm.C_350034 2 1 U2 GTATGTTT..ACAG
estExt_fgenesh1_pg.C_1180104 3 1 U2 GTACGTAT..GCAG
LOC_Os01g72890.1 2 1 U2 GTGAGTTT..TCAG
LOC_Os01g72890.2 2 1 U2 GTGAGTTT..TCAG
fgenesh1_pg.C_chr_3004174 1 1 U2 GTGAGCTT..TCAG
GRMZM2G133926_T01 2 1 U2 GTGAGTTT..TCAG
GRMZM2G060540_T01 2 1 U2 GTGAGTTT..TCAG
GRMZM2G060540_T02 2 1 U2 GTGAGTTT..TCAG
Glyma08g18310.1 2 1 U2 GTATGCTT..TCAG
Glyma15g40710.1 2 1 U2 GTATGTTT..TCAG
GSVIVP00025760001 2 1 U2 GTATGTTT..CTAG
estExt_fgenesh4_pg.C_LG_XI1221 2 1 U2 GTGAGTTC..TCAG
7: 147-147
estExt_fgenesh1_pm.C_350034 3 0 U2 GTAAGGCA..ACAG
estExt_fgenesh1_pg.C_1180104 4 0 U2 GTAAGTAG..ACAG
LOC_Os01g72890.1 3 0 U2 GTAAGTTA..TTAG
LOC_Os01g72890.2 3 0 U2 GTAAGTTA..TTAG
fgenesh1_pg.C_chr_3004174 2 0 U2 GTAAGTGA..TTAG
GRMZM2G133926_T01 3 0 U2 GTATTGAA..TTAG
GRMZM2G060540_T01 3 0 U2 GTAAGTGA..TTAG
GRMZM2G060540_T02 3 0 U2 GTAAGTGA..TTAG
Glyma08g18310.1 3 0 U2 GTAAGTTT..CCAG
Glyma15g40710.1 3 0 U2 GTAAGTTT..CCAG
GSVIVP00025760001 3 0 U2 GTAAGTTT..GTAG
estExt_fgenesh4_pg.C_LG_XI1221 3 0 U2 GTAAGTCT..GCAG
8: 154-154
fgenesh1_pg.scaffold_157000058 2 0 U2 GTACAAAT..TCAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
DGGQIDGNIVSAQVLLVPRKKASALPLKRGVSPPPKRELSG-----------------RD
DGGQIDGNIVSAQFILVPRKKASPPL-KRGVSPPPKREIMG-----------------RD
DGGQIDGNVVSAQFILVPRRKPTPPPVKRQVSPAPKREIVG-----------------RE
DGGQIDGNVVKLRFTLAPRQRASSPM--KAPPPPPKRDVPHNEKGAPSAEKD--VQQRRE
DGGQIDGNVVKLRFTLAPRQRASSPM--KAPPPPPKRDVPHNEKGAPSAEKD--VQQRRE
DGGQIDGNVVKLRFTLQPRQRAASPM--KAPPPPPKRDAPQIEKGVTSAEKD-AQQRPRE
DGGQIDGNVVKLRFTLQPRQRAVSPM--KAPPPPPKRDVAQIEKGLSSAEKD-AQQRPRE
DGGQIDGNIVKLRFTLQPRQRAASPV--KAPPPPPKRDALQIEKGVSSAEKD-AQQRPKE
DGGQIDGNIVKLRFTLQPRQRAASPV--KAPPPPPKRDALQIEKGVSSAEKD-AQQRPKE
DGAQIDGKVVKATFTLPPRQKVSSPP--KPVSAAPKRDAPKSDNAAADAEKDGGPRRPRE
E-----------------------------------------------------------
DGAQIDGNVIKARFTLPPRQKVSPPP--KTSAVAPKREIPRTDNASADVDKD-GPKRQRE
DGAQIDGNVIKARFTLPPRQKVSPPP--KASAVAPKRDTPRADNASADVDKD-GPKRQRE
DGAQIDGNVIKARFTLPPRQKVSPPP--KPSALAPKREAPRTDNAGADIEKD-GPKRQRE
DGAQIDGNVVRAKFTLPQRQKISSPP--KAVATASKRDGPKTDNVGADVEKD-GPKRQRE
DGAQIDGNVVRAKFTLPPRQKLSPPP--KPIAAAPKRDAPKTDNASADAEKD-GPKRQRE
9: 181-181
fgenesh1_pg.scaffold_157000058 3 0 U2 GTTTGTGA..GCAG
estExt_fgenesh1_pm.C_350034 4 0 U2 GTTTGTGT..GCAG
estExt_fgenesh1_pg.C_1180104 5 0 U2 GTATGTGA..GCAG
LOC_Os01g72890.1 4 0 U2 GTATGTTT..GCAG
LOC_Os01g72890.2 4 0 U2 GTATGTTT..GCAG
fgenesh1_pg.C_chr_3004174 3 0 U2 GTATGCAT..TCAG
GRMZM2G133926_T01 4 0 U2 GTATGCAT..ACAG
GRMZM2G060540_T01 4 0 U2 GTATGCAT..CCAG
GRMZM2G060540_T02 4 0 U2 GTATGCAT..CCAG
Glyma08g18310.1 4 0 U2 GTAGGTTT..GCAG
Glyma15g40710.1 4 0 U2 GTAGGTTT..GCAG
GSVIVP00025760001 4 0 U2 GTATGGTT..GCAG
estExt_fgenesh4_pg.C_LG_XI1221 4 0 U2 GTAGGTCA..GCAG
10: 239-239
LOC_Os01g72890.1 5 1 U2 GTAAGCTT..ACAG
LOC_Os01g72890.2 5 1 U2 GTAAGCTT..ACAG
fgenesh1_pg.C_chr_3004174 4 1 U2 GTAAGCTT..GCAG
GRMZM2G133926_T01 5 1 U2 GTAAGCTT..GTAG
GRMZM2G060540_T01 5 1 U2 GTACGCTT..GCAG
GRMZM2G060540_T02 5 1 U2 GTACGCTT..GCAG
Glyma08g18310.1 5 1 U2 GTATATAT..CCAG
Glyma15g40710.1 5 1 U2 GTATATAT..CCAG
GSVIVP00025760001 5 1 U2 GTACTCTT..TCAG
estExt_fgenesh4_pg.C_LG_XI1221 5 1 U2 GTATGGCT..TCAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
VPPRDGLKDGPRRLDFP---HVLTLQQIYNRISLYQVSSPENTRQ------------PCR
GPPRDGLKDGSRRRDSPPPRRGRSP-------------SPPPRRRSVSPRRRMADSPPRR
VPPRDGVKDGLRRRDSPPIRRGRSP-------------SPPPRRRSGSPRRRMPDSPPRR
PSPRRKPASPPRKRTPP-NRRIESPRRQPDPSPRRRPDSPPIRRRADASPVRRGDTPPRR
PSPRRKPASPPRKRTPP-NRRIESPRRQPDPSPRRRPDSPPIRRRADASPVRRGDTPPRR
SSPRRKPASPPRKRSP--NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDTPPRR
SSPRRKPASPPRKRSP--NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGGTPPRR
SSPRRKPASPLRKRSP--NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDT-PRR
SSPRRKPASPLRKRSP--NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDT-PRR
TSPQRKTGLSPRRRSPL-PRRGLSPRR-------RSPDSP-HRRRPGSPIRRRGDTPPRR
------------------------------------------------------------
SSPRRKPPPSPRRRSPV-PRRAGSPRRP--DSPRRRADSP-VRRRVDSPYRRGGDTPPRR
SSPRRKPPPSPRRRSPV-PRRAGSPRRP--DSPRRRADSP-VRRRLDSPYRRGGDTPPRR
SSPRRKPPPSPRRRSPV-PRRVGSPRRP--DSPRRRVDSP-VRRRLDSPYRRGGDTPPRR
ASPRRKPPSPPRRRSPAPGRRGGSPRR--------QLDSP--QRRLESPY-RRGETPPRR
PSPHRKPLASPRRRSPV-ARRGGSPRRQLDSPPRRRADSP-GRRRVESPY-RRGETPPRR
11: 254-254
fgenesh1_pg.scaffold_157000058 4 1 U2 GTAAGTGG..GCAG
estExt_fgenesh1_pm.C_350034 5 1 U2 GTAAGTGT..GCAG
estExt_fgenesh1_pg.C_1180104 6 1 U2 GTAAGTGT..TCAG
12: 284-284
GSVIVP00025760001 6 1 U2 GTGGAGAG..CGAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
TTALSASMQKAVC------WVENSVKAVQRVVRVIGLLKNQLYRSMIKSP--PSGRRVRS
RPALASP-RRRSP-SPFRRRRRSPIRSPPRRIRGSPVGRQRSPPPPYRRRSPPPGRRLRS
RAPAVSPRRRRSP--SPFRRRRSPIRSPPRRIRGSPVRRPRSPPPYRRRS-PPPGRRARS
RPG--SPVRRRSP-SPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPPPRRPRS
RPG--SPVRRRSP-SPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPPPRRPRS
RPL--SPVRRRSP-SPPPRRHRSPMRPSPRRGRGSPSPRRRSPGPLRRRGRGPPLRRGRS
RPL--SPVRRRSP-S-PPRRHRSPMRPSPRRGRGSPSPRRRSPGPLRRRS--PPPRRLRS
RPP--SPVRRRSP-SPPPRRHRSPMRLSPRRGRGSPSPRRRSPGPLRRRS--PPPRRLRS
RPP--SPVRRRSP-SPPPRRHRSPMRLSPRRGRGSPSPRRRSPGPLRRRS--PPPRRLRS
RPA--SPSRGRSPSSPPPRRYRSPPRGSPRRIRGSPV-RRRSPLPLRRRS--PPPRRLRS
------------------------------------------------------------
RPV--SPGRGRSP-S-PPRRLRSPARLSPRRMRGSPGRRRSPPPPPRRRS---PPRRPRS
RPV--SPGRGRSP-S-PPRRLRSPARLSPRRIRGSPGRRRSPPPPPRRRS---PPRRPRS
RPV--SPGRGRSP-S-PPRRLRSPARVSPRRLRGSPGRRRSPPPPPRRRS--PPPRRARS
RPA--SPSRGRSP-LSPPRRHRSPARASPRRMRGSPV-RRRSPPPPRRRS---PPRRARS
RPA--SPARGRSP-SSPPRRYRSPLRASPRRMRGSPV-RRRSPPP--RRR--TPPRRARS
13: 309-309
fgenesh1_pg.scaffold_157000058 5 0 U2 GTAAGTAA..CCAG
14: 324-324
estExt_fgenesh1_pm.C_350034 6 2 U2 GTGTGCAG..ACAG
estExt_fgenesh1_pg.C_1180104 7 2 U2 GTATGGTG..TCAG
LOC_Os01g72890.1 6 2 U2 GTGAGCAA..ACAG
LOC_Os01g72890.2 6 2 U2 GTGAGCAA..ACAG
fgenesh1_pg.C_chr_3004174 5 2 U2 GTAATCAA..CCAG
GRMZM2G133926_T01 6 2 U2 GTAATCAA..CCAG
GRMZM2G060540_T01 6 2 U2 GTAATCAA..CCAG
GRMZM2G060540_T02 6 2 U2 GTAATCAA..CCAG
Glyma08g18310.1 6 2 U2 GTTGGCTT..GTAG
Glyma15g40710.1 6 2 U2 GTAGGCTT..GTAG
GSVIVP00025760001 7 2 U2 GTCAGTGA..GAAG
estExt_fgenesh4_pg.C_LG_XI1221 6 2 U2 GTAGGTAG..CTAG
15: 346-348
fgenesh1_pg.scaffold_157000058 6 2 U2 GTGTCTTA..GCAG
estExt_fgenesh1_pm.C_350034 7 2 U2 GTAAGTGA..TCAG
estExt_fgenesh1_pg.C_1180104 8 2 U2 GTAATTGA..ACAG
LOC_Os01g72890.1 7 2 U2 GTGAGTCA..CCAG
LOC_Os01g72890.2 7 2 U2 GTGAGTCA..CCAG
fgenesh1_pg.C_chr_3004174 6 2 U2 GTGAGTTT..GCAG
GRMZM2G133926_T01 7 2 U2 GTGAGTTT..CTAG
GRMZM2G060540_T01 7 2 U2 GTGAGTTT..GTAG
GRMZM2G060540_T02 7 2 U2 GTGAGTTT..GTAG
Glyma08g18310.1 7 2 U2 GTAATTTT..CCAG
Glyma15g40710.1 7 2 U2 GTAATTTT..GCAG
GSVIVP00025760001 8 2 U2 GTAATTGA..TCAG
estExt_fgenesh4_pg.C_LG_XI1221 7 2 U2 GTAATTAT..ACAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
P--PPRRSPPRHRTSRSPPPRRPFRSRSRSHSAPS------------------RAIANS-
P--PPRRSPPRRRTSRSPPPRRPLRSRSRSRSPPRR-----------ARSPVGKRRKS--
P--PPRRSPPRRRASRSPPPRRPLRSRSRSRSAPRRYINFHSNSFSWARSPINKRKRS--
P--PGRRLPPPRRHSRSPPPRRPPHSRSRSISPRT------------RRGPPLRRGRSD-
P--PGRRLPPPRRHSRSPPPRRPPHSRSRSISPRT-------------RGPPLRRGRSD-
D--------SSYSRSPTPPPRKVSVATDMVFVASN------------TKGQEGYQGAAAL
P--P-RRPPPPRRYSRS-PPRRPLRSR--SISPRR------------GRGPLLRRGRSG-
P--P-RRPPPPRRFSRS-PPRRPLRSRSRSISPRR------------GRGPPLRRGRSD-
P--P-RRPPPPRRFSRS-PPRRPLRSRSRSISPRR------------GRGPPLRRGRSD-
P--P-RRSPI-RRRSRS-PIRRPGRSRSSSISPRK------------GRGPAGRRGRS--
------------------------------------------------------------
P--P-RRSPIGRRRTRS-PIRRSARSRSRSFSPRR------------GR-PPVRRGRS--
P--P-RRSPIGRRRTRS-PIRRSARSRSRSFSPRR------------GR-PPVRRGRS--
P--P-RRSPIGRRRSRS-PIRRPARSNSRSFSPRR------------GR-PPVRRGRS--
PPMP-RRSPVNRRRSRSPPVRRPVRSRSRSISPRR------------GRALAARHRRS--
P--P-RRSPL-RRRSRS-PICRPARSRSRSLSPRR------------GRAPGARRGRS--
16: 393-394
fgenesh1_pg.scaffold_157000058 7 2 U2 GTATTAAC..ACAG
estExt_fgenesh1_pm.C_350034 8 2 U2 GTATTATA..GCAG
LOC_Os01g72890.1 8 2 U2 GTAATAAA..GCAG
LOC_Os01g72890.2 8 2 U2 GTAATAAA..GCAG
GRMZM2G133926_T01 8 2 U2 GTAGTGGA..GCAG
GRMZM2G060540_T01 8 2 U2 GTAGTGGG..GCAG
GRMZM2G060540_T02 8 2 U2 GTAGTGGG..GCAG
Glyma08g18310.1 8 2 U2 GTAATTTT..ACAG
Glyma15g40710.1 8 2 U2 GTAATTTT..ACAG
GSVIVP00025760001 9 2 U2 GTAACACC..ACAG
estExt_fgenesh4_pg.C_LG_XI1221 8 2 U2 GTAAACAT..GCAG
17: 405-407
estExt_fgenesh1_pg.C_1180104 9 2 U2 GTGTTCTA..GCAG
fgenesh1_pg.C_chr_3004174 7 2 U2 GTAATACT..ATAG
Pp~fgenesh1_pg.scaffold_157000058
Pp~estExt_fgenesh1_pm.C_350034
Pp~estExt_fgenesh1_pg.C_1180104
Os~LOC_Os01g72890.1
Os~LOC_Os01g72890.2
Sb~fgenesh1_pg.C_chr_3004174
Zm~GRMZM2G133926_T01
Zm~GRMZM2G060540_T01
Zm~GRMZM2G060540_T02
At~AT1G16610.1
Lj~LjSGA_083953.1
Gm~Glyma08g18310.1
Gm~Glyma15g40710.1
Lj~LjSGA_010297.2
Vv~GSVIVP00025760001
Pt~estExt_fgenesh4_pg.C_LG_XI1221
NPSGRAYSP--------PSPSKSSQALAKPIPVIN-----------------------
TSYPSSPSPAKKRTSPPRGAKDFSKSRSPKKTIAN---SSPSGRSSSSPSPSKSSQ--
TSYSTSPSPVKRVS--PPGAKKFLKSRSPKKAFAN---SSPSGRSSSPSPSKSSQ---
SSYSRSPSPPR------KGPRRVSRSRTPPRHRRG-RSISSDSRSSSSPSPRRR----
SSYSRSPSPPR------KGPRRVSRSRTPPRHRRG-RSISSDSRSSSSPSPRRR----
EGLLEEEASLVTAEAAVHLPLDAAGRRNPWHCVSGRCPKVFIYFVGKSSSTLPL----
SSYSRSPTPPPR-----KGPRRVSRSRSPRRPPRG-RSISSDSRSSSSPSPRRGR---
SSYSRSPTPPPR-----KGPRRVSRSRSPRK---------------------------
SSYSRSPTPPPR-----KGPRRVSRSRSPRKPPRAGRSVSSDSRSSSSPSPRRGR---
SSYSSSPSP--R-----RIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPPPRKT-
----------------------------------------------------------
SSYSDSPSP--R-----KVSRR-SKSRSPRRPLRGRGSSNSSSSSSPPPPPPPPPRKP
SSYSDSPSP--R-----KVSRR-SKSRSPRRPLRGRGSSNSSSSSSPPPPPPPPTRKP
SSFSDSPSP--R-----KVSRR-SRSRSPRRPLRGGRASSNSSSSSSPPPPPPPARK-
SSYSGSPSP--R-----KAVRKMSRSGSPRRPLRG---KSSSNSSSSGTPPRKP----
SSYSGSPSP--R-----KATRKISRSRSPRRPLRG---RSSSNSSSSSSPPRKP----
18: 420-420
fgenesh1_pg.C_chr_3004174 8 1 U2 GTAACATA..GCAG
19: 430-431
estExt_fgenesh1_pm.C_350034 9 0 U2 GTGACTAA..GTAG
estExt_fgenesh1_pg.C_1180104 10 0 U2 GTTAATAA..CCAG
20: 437-437
LOC_Os01g72890.1 9 0 U2 GTAAATGC..ATAG
LOC_Os01g72890.2 9 0 U2 GTAAATGC..ATAG
GRMZM2G133926_T01 9 0 U2 GTGAGTGC..ATAG
GRMZM2G060540_T01 9 0 U2 GTGAGTGC..ATAG
GRMZM2G060540_T02 9 0 U2 GTGAGTGC..ATAG
Glyma08g18310.1 9 0 U2 GTATGTGT..ACAG
Glyma15g40710.1 9 0 U2 GTATGCGT..ACAG
GSVIVP00025760001 10 0 U2 GTTTGTTT..ACAG
estExt_fgenesh4_pg.C_LG_XI1221 9 0 U2 GTTGGTGC..ACAG
21: 443-443
fgenesh1_pg.scaffold_157000058 8 2 U2 GTAAGATG..GCAG
22: 449-449
estExt_fgenesh1_pm.C_350034 10 2 U2 GTAAGAAT..TCAG
estExt_fgenesh1_pg.C_1180104 11 2 U2 GTAAGCTG..ACAG
LOC_Os01g72890.1 10 2 U2 GTAACATG..TCAG
LOC_Os01g72890.2 10 2 U2 GTAACATG..TCAG
GRMZM2G133926_T01 10 2 U2 GTAACATA..GCAG
GRMZM2G060540_T02 10 2 U2 GTAACATA..GCAG
Glyma08g18310.1 10 2 U2 GTAATGCA..GTAG
Glyma15g40710.1 10 2 U2 GTAATGTA..GTAG
GSVIVP00025760001 11 2 U2 GTAGTATT..GCAG
estExt_fgenesh4_pg.C_LG_XI1221 10 2 U2 GTAATTCA..GTAG
23: 454-454
fgenesh1_pg.C_chr_3004174 9 2 U2 GTAAAGCC..TAAG


3' UTR introns