SRGD	Gene ID 344	BLASTp at NCBI	n/a	n/a		Organisms Zm ,Mt ,Vv ,Os ,Gm ,Pp ,Lj ,Sb ,Pt ,At Gene count 16 Cintron count 9 Cintron classes U2 ,im ,GC ,U12 ,absent ,em
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_330029 Pp~fgenesh1_pm.scaffold_33000008 Zm~GRMZM2G115176_T03 Zm~GRMZM2G115176_T01 Os~LOC_Os02g01250.1 Os~LOC_Os03g13760.1 Zm~GRMZM2G115925_T01 Sb~Sb01g041430 At~AT1G20580.1 Pt~eugene3.00020086 Pt~estExt_Genewise1_v1.C_LG_V2071 Vv~GSVIVP00002878001 Gm~Glyma05g31950.1 Gm~Glyma08g15260.1 Mt~AC141113_9.2 Lj~chr3.CM0164.220.nd	MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDGKVSQL MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL MSRSLGIPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDGKVSQL MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDGKVSQL MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL	2: 0-0 AC141113_9.2 0 0 U2 .. 3: 52-52 estExt_fgenesh1_pg.C_330029 0 0 U2 GTGAATTT..TCAG fgenesh1_pm.scaffold_33000008 0 0 U2 GTGAATTT..TCAG GRMZM2G115176_T03 1 0 U2 GTTGGTTT..CCAG GRMZM2G115176_T01 1 0 U2 GTTGGTTT..CCAG LOC_Os02g01250.1 0 0 U12 GTACCCTT..ATAG LOC_Os03g13760.1 0 0 U2 GTATGAGC..GCAG GRMZM2G115925_T01 0 0 U2 GTATGCTC..GCAG Sb01g041430 0 0 U2 GTATGCTC..GCAG AT1G20580.1 0 0 U2 GTAATCAA..ACAG eugene3.00020086 0 0 U2 GTACCACT..ACAG estExt_Genewise1_v1.C_LG_V2071 0 0 GC GCACTACT..ACAG GSVIVP00002878001 0 0 U2 GTACTACT..ACAG Glyma05g31950.1 0 0 U2 GTTCTCTT..TCAG Glyma08g15260.1 0 0 U2 GTTCCCTT..TCAG chr3.CM0164.220.nd 0 0 U2 GTACCCAC..TCAG
Pp~estExt_fgenesh1_pg.C_330029 Pp~fgenesh1_pm.scaffold_33000008 Zm~GRMZM2G115176_T03 Zm~GRMZM2G115176_T01 Os~LOC_Os02g01250.1 Os~LOC_Os03g13760.1 Zm~GRMZM2G115925_T01 Sb~Sb01g041430 At~AT1G20580.1 Pt~eugene3.00020086 Pt~estExt_Genewise1_v1.C_LG_V2071 Vv~GSVIVP00002878001 Gm~Glyma05g31950.1 Gm~Glyma08g15260.1 Mt~AC141113_9.2 Lj~chr3.CM0164.220.nd	EHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSSGVGVGRGRASTMQAKARSAARG EHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSSGVGVGRGRASTMQAKARSAARG EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-VGVGRGRAVAMRARVISSCFL EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-VGVGRGRAVAMRARA-AAGRG EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-ASGRG EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSS-LGVGRGRGAMRGKPAAGPGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS-LGVGRGRSVAMRSKAQATGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS-LGVGRGRSVAMRSKAQAAGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSA-LGVGRGRAVAMRARAQAAGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGAS-LGVGRGRAVAMRAKAQSAGRG	4: 69-69 estExt_fgenesh1_pg.C_330029 1 2 U2 GTGTGTTT..GCAG fgenesh1_pm.scaffold_33000008 1 2 U2 GTGTGTTT..GCAG LOC_Os03g13760.1 1 2 U2 GTAACCCA..GCAG GRMZM2G115925_T01 1 2 U2 GTAATAAA..ACAG Sb01g041430 1 2 U2 GTAATCGG..GCAG AT1G20580.1 1 2 U2 GTGCTGTA..ACAG eugene3.00020086 1 2 U2 GTAGCTAA..ACAG estExt_Genewise1_v1.C_LG_V2071 1 2 U2 GTACCTAA..ACAG GSVIVP00002878001 1 2 U2 GTATCAAA..CCAG Glyma05g31950.1 1 2 U2 GTATGAAT..ACAG Glyma08g15260.1 1 2 U2 GTACGAAT..ACAG chr3.CM0164.220.nd 1 2 U2 GTATGAAT..ACAG 5: 92-92 estExt_fgenesh1_pg.C_330029 2 0 U2 GTGCAATA..GCAG fgenesh1_pm.scaffold_33000008 2 0 U2 GTGCAATA..GCAG GRMZM2G115176_T03 2 0 U2 GTTGGCAC..GCAG GRMZM2G115176_T01 2 0 U2 GTTGGCAC..GCAG LOC_Os02g01250.1 1 0 U2 GTATTTCT..GCAG LOC_Os03g13760.1 2 0 U2 GTTGGTGA..GTAG GRMZM2G115925_T01 2 0 U2 GTTTGTGA..GTAG Sb01g041430 2 0 U2 GTTTGTGA..GTAG AT1G20580.1 2 0 U2 GTATATAT..GTAG eugene3.00020086 2 0 U2 GTATCTCC..GAAG estExt_Genewise1_v1.C_LG_V2071 2 0 U2 GTATGATC..GAAG GSVIVP00002878001 2 0 U2 GTACTCAT..GAAG Glyma05g31950.1 2 0 U2 GTACCTTC..GAAG Glyma08g15260.1 2 0 U2 GTAACTTC..GAAG chr3.CM0164.220.nd 2 0 U2 GTACCTTC..GAAG 6: 111-112 estExt_fgenesh1_pg.C_330029 3 0 U2 GTTAGTGT..ACAG fgenesh1_pm.scaffold_33000008 3 0 U2 GTTAGTGT..ACAG GRMZM2G115176_T01 3 0 U2 GTAATCAG..GTAG LOC_Os02g01250.1 2 0 U2 GTAATCAT..GCAG LOC_Os03g13760.1 3 0 U2 GTAATGGT..GCAG GRMZM2G115925_T01 3 0 U2 GTAATGTT..TTAG Sb01g041430 3 0 U2 GTAATGTT..TTAG AT1G20580.1 3 0 U2 GTAAGTTC..AAAG eugene3.00020086 3 0 U2 GTAAGCAT..GCAG estExt_Genewise1_v1.C_LG_V2071 3 0 U2 GTAAGCAT..GCAG GSVIVP00002878001 3 0 U2 GTAAGTTT..GCAG Glyma05g31950.1 3 0 U2 GTACTTAT..GTAG Glyma08g15260.1 3 0 U2 GTACTTAT..GTAG chr3.CM0164.220.nd 3 0 U2 GTATTTAC..GCAG
Pp~estExt_fgenesh1_pg.C_330029 Pp~fgenesh1_pm.scaffold_33000008 Zm~GRMZM2G115176_T03 Zm~GRMZM2G115176_T01 Os~LOC_Os02g01250.1 Os~LOC_Os03g13760.1 Zm~GRMZM2G115925_T01 Sb~Sb01g041430 At~AT1G20580.1 Pt~eugene3.00020086 Pt~estExt_Genewise1_v1.C_LG_V2071 Vv~GSVIVP00002878001 Gm~Glyma05g31950.1 Gm~Glyma08g15260.1 Mt~AC141113_9.2 Lj~chr3.CM0164.220.nd	SVPPPMGGRGAAPPMRR SVPPPMGGRGAAPPMRR -------STSTT----C GGPV---GRGGAPPVRR GGPV---GRGGAPPVRR GGPV---GRGGAPPVRR GGPV---GRGSAPPVRR GGPV---GRGSAPPVRR TG-----GRGAVPPVRR AAP----GRGVVPPVRR APP----GRGVVPPVRR APP----GRGVVPPVRR AAP----GRGV-PPVRR AAP----GRGV-PPVRR APP----GRGV-PPVRR AAP----GRGA-PPVRR