SRGD Gene ID 344 BLASTp at NCBI n/a n/a  
OrganismsZm ,Mt ,Vv ,Os ,Gm ,Pp ,Lj ,Sb ,Pt ,At
Gene count16
Cintron count9
Cintron classesU2 ,im ,GC ,U12 ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_330029
Pp~fgenesh1_pm.scaffold_33000008
Zm~GRMZM2G115176_T03
Zm~GRMZM2G115176_T01
Os~LOC_Os02g01250.1
Os~LOC_Os03g13760.1
Zm~GRMZM2G115925_T01
Sb~Sb01g041430
At~AT1G20580.1
Pt~eugene3.00020086
Pt~estExt_Genewise1_v1.C_LG_V2071
Vv~GSVIVP00002878001
Gm~Glyma05g31950.1
Gm~Glyma08g15260.1
Mt~AC141113_9.2
Lj~chr3.CM0164.220.nd
MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL
MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLDNITFTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDGKVSQL
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDGKVSQL
MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDGKVSQL
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL
MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL
2: 0-0
AC141113_9.2 0 0 U2 ..
3: 52-52
estExt_fgenesh1_pg.C_330029 0 0 U2 GTGAATTT..TCAG
fgenesh1_pm.scaffold_33000008 0 0 U2 GTGAATTT..TCAG
GRMZM2G115176_T03 1 0 U2 GTTGGTTT..CCAG
GRMZM2G115176_T01 1 0 U2 GTTGGTTT..CCAG
LOC_Os02g01250.1 0 0 U12 GTACCCTT..ATAG
LOC_Os03g13760.1 0 0 U2 GTATGAGC..GCAG
GRMZM2G115925_T01 0 0 U2 GTATGCTC..GCAG
Sb01g041430 0 0 U2 GTATGCTC..GCAG
AT1G20580.1 0 0 U2 GTAATCAA..ACAG
eugene3.00020086 0 0 U2 GTACCACT..ACAG
estExt_Genewise1_v1.C_LG_V2071 0 0 GC GCACTACT..ACAG
GSVIVP00002878001 0 0 U2 GTACTACT..ACAG
Glyma05g31950.1 0 0 U2 GTTCTCTT..TCAG
Glyma08g15260.1 0 0 U2 GTTCCCTT..TCAG
chr3.CM0164.220.nd 0 0 U2 GTACCCAC..TCAG
Pp~estExt_fgenesh1_pg.C_330029
Pp~fgenesh1_pm.scaffold_33000008
Zm~GRMZM2G115176_T03
Zm~GRMZM2G115176_T01
Os~LOC_Os02g01250.1
Os~LOC_Os03g13760.1
Zm~GRMZM2G115925_T01
Sb~Sb01g041430
At~AT1G20580.1
Pt~eugene3.00020086
Pt~estExt_Genewise1_v1.C_LG_V2071
Vv~GSVIVP00002878001
Gm~Glyma05g31950.1
Gm~Glyma08g15260.1
Mt~AC141113_9.2
Lj~chr3.CM0164.220.nd
EHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSSGVGVGRGRASTMQAKARSAARG
EHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSSGVGVGRGRASTMQAKARSAARG
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-VGVGRGRAVAMRARVISSCFL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-VGVGRGRAVAMRARA-AAGRG
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-ASGRG
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA-IGVGRGRAVAMRARA-AAGRG
EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSS-LGVGRGRGAMRGKPAAGPGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS-LGVGRGRSVAMRSKAQATGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS-LGVGRGRSVAMRSKAQAAGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSA-LGVGRGRAVAMRARAQAAGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS-LGVGRGRAVAMRAKAQAAGRG
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGAS-LGVGRGRAVAMRAKAQSAGRG
4: 69-69
estExt_fgenesh1_pg.C_330029 1 2 U2 GTGTGTTT..GCAG
fgenesh1_pm.scaffold_33000008 1 2 U2 GTGTGTTT..GCAG
LOC_Os03g13760.1 1 2 U2 GTAACCCA..GCAG
GRMZM2G115925_T01 1 2 U2 GTAATAAA..ACAG
Sb01g041430 1 2 U2 GTAATCGG..GCAG
AT1G20580.1 1 2 U2 GTGCTGTA..ACAG
eugene3.00020086 1 2 U2 GTAGCTAA..ACAG
estExt_Genewise1_v1.C_LG_V2071 1 2 U2 GTACCTAA..ACAG
GSVIVP00002878001 1 2 U2 GTATCAAA..CCAG
Glyma05g31950.1 1 2 U2 GTATGAAT..ACAG
Glyma08g15260.1 1 2 U2 GTACGAAT..ACAG
chr3.CM0164.220.nd 1 2 U2 GTATGAAT..ACAG
5: 92-92
estExt_fgenesh1_pg.C_330029 2 0 U2 GTGCAATA..GCAG
fgenesh1_pm.scaffold_33000008 2 0 U2 GTGCAATA..GCAG
GRMZM2G115176_T03 2 0 U2 GTTGGCAC..GCAG
GRMZM2G115176_T01 2 0 U2 GTTGGCAC..GCAG
LOC_Os02g01250.1 1 0 U2 GTATTTCT..GCAG
LOC_Os03g13760.1 2 0 U2 GTTGGTGA..GTAG
GRMZM2G115925_T01 2 0 U2 GTTTGTGA..GTAG
Sb01g041430 2 0 U2 GTTTGTGA..GTAG
AT1G20580.1 2 0 U2 GTATATAT..GTAG
eugene3.00020086 2 0 U2 GTATCTCC..GAAG
estExt_Genewise1_v1.C_LG_V2071 2 0 U2 GTATGATC..GAAG
GSVIVP00002878001 2 0 U2 GTACTCAT..GAAG
Glyma05g31950.1 2 0 U2 GTACCTTC..GAAG
Glyma08g15260.1 2 0 U2 GTAACTTC..GAAG
chr3.CM0164.220.nd 2 0 U2 GTACCTTC..GAAG
6: 111-112
estExt_fgenesh1_pg.C_330029 3 0 U2 GTTAGTGT..ACAG
fgenesh1_pm.scaffold_33000008 3 0 U2 GTTAGTGT..ACAG
GRMZM2G115176_T01 3 0 U2 GTAATCAG..GTAG
LOC_Os02g01250.1 2 0 U2 GTAATCAT..GCAG
LOC_Os03g13760.1 3 0 U2 GTAATGGT..GCAG
GRMZM2G115925_T01 3 0 U2 GTAATGTT..TTAG
Sb01g041430 3 0 U2 GTAATGTT..TTAG
AT1G20580.1 3 0 U2 GTAAGTTC..AAAG
eugene3.00020086 3 0 U2 GTAAGCAT..GCAG
estExt_Genewise1_v1.C_LG_V2071 3 0 U2 GTAAGCAT..GCAG
GSVIVP00002878001 3 0 U2 GTAAGTTT..GCAG
Glyma05g31950.1 3 0 U2 GTACTTAT..GTAG
Glyma08g15260.1 3 0 U2 GTACTTAT..GTAG
chr3.CM0164.220.nd 3 0 U2 GTATTTAC..GCAG
Pp~estExt_fgenesh1_pg.C_330029
Pp~fgenesh1_pm.scaffold_33000008
Zm~GRMZM2G115176_T03
Zm~GRMZM2G115176_T01
Os~LOC_Os02g01250.1
Os~LOC_Os03g13760.1
Zm~GRMZM2G115925_T01
Sb~Sb01g041430
At~AT1G20580.1
Pt~eugene3.00020086
Pt~estExt_Genewise1_v1.C_LG_V2071
Vv~GSVIVP00002878001
Gm~Glyma05g31950.1
Gm~Glyma08g15260.1
Mt~AC141113_9.2
Lj~chr3.CM0164.220.nd
SVPPPMGGRGAAPPMRR
SVPPPMGGRGAAPPMRR
-------STSTT----C
GGPV---GRGGAPPVRR
GGPV---GRGGAPPVRR
GGPV---GRGGAPPVRR
GGPV---GRGSAPPVRR
GGPV---GRGSAPPVRR
TG-----GRGAVPPVRR
AAP----GRGVVPPVRR
APP----GRGVVPPVRR
APP----GRGVVPPVRR
AAP----GRGV-PPVRR
AAP----GRGV-PPVRR
APP----GRGV-PPVRR
AAP----GRGA-PPVRR