SRGD Gene ID 341 BLASTp at NCBI n/a n/a  
OrganismsAt ,Vv ,Mt ,Os ,Gm ,Zm ,Lj ,Sb ,Pt
Gene count16
Cintron count13
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
MSGGLYNHQG--FSPARTLSPQIRSNPEAD-SQYLSELLAEHHKLGPFMQVLPICSRLLN
-MSGLYN-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN
-MSGLYN-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN
-MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN
-MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN
-MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN
-MSGLYN-NSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLN
-MSGLYN-HN--FSPARAVSPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN
-MSGLYN-PN--FSPARAASPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPTCSRLLN
-MSGLYN-SN--FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKLGPFMQALPICSRLLN
-MSGLYN-SN--FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKFGPFMQALPICSRLLN
-MSGLYN-QN--FSHARAASPQIRPSSEVD-SQYLSELLAEHQKLGPFLQVLPICSRLLN
-MSGLYN-PN--YSPARAASPQIRSTPE-D-SQYLQELLAEHQKLGPFTQVLPICNRLIN
-MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN
-MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN
-MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN
2: 1-1
AT2G38610.1 0 0 U2 ..
3: 29-29
LOC_Os07g12490.1 0 2 U2 GTACGGCC..GCAG
estExt_Genewise1Plus.C_chr_21433 0 2 U2 GTACTGAT..GCAG
GRMZM2G472052_T01 0 2 U2 GTACTAAT..GCAG
GRMZM2G472052_T02 0 2 U2 GTACTAAT..GCAG
GSVIVP00033645001 0 2 U2 GTAGGGTT..GTAG
estExt_fgenesh4_pm.C_280159 0 2 U2 GTATGCAA..GCAG
Glyma03g00370.1 0 2 U2 GTTTGTAT..TCAG
Glyma16g34750.1 0 2 U2 GTATTTAT..TCAG
AC169178_21.2 0 2 U2 GTATAGTA..GCAG
Glyma09g40820.1 0 2 U2 GTGAGTTG..GCAG
Glyma09g40820.2 0 2 U2 GTGAGTTG..GCAG
Glyma18g44980.1 0 2 U2 GTGAGTTG..GCAG
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
QEIMRVSSMVNDHGFNDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWNGIHQE-RLGFPPP
QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF---
QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF---
QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGL---
QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF---
QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF---
QEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLS----
QEIIRVSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQE-RLS----
QEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQE-RLS----
QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQE-RLR----
QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQE-RLR----
QEILRVSGMLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMGAWNSLQQE-RLC----
QEILRVSRMLSNQGFGDFDRLRHRSPSPMASSNIMSNVSGTGLGGWNSLQQE-RFS----
QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQEQRLC----
QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQE-RLC----
QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQE-RLC----
4: 60-60
LOC_Os07g12490.1 1 1 U2 GTGAGATC..TTAG
estExt_Genewise1Plus.C_chr_21433 1 1 U2 GTGAGATC..GTAG
GRMZM2G472052_T01 1 1 U2 GTGAGAGA..GTAG
GRMZM2G472052_T02 1 1 U2 GTGAGAGA..GTAG
GSVIVP00033645001 1 1 U2 GTTTGTTT..GCAG
estExt_fgenesh4_pm.C_280159 1 1 U2 GTTAGTTC..GTAG
Glyma03g00370.1 1 1 U2 GTTTCTTT..GCAG
Glyma16g34750.1 1 1 U2 GTTTCTTT..GCAG
AC169178_21.2 1 1 U2 GTCTGTTC..GCAG
Glyma09g40820.1 1 1 U2 GTCTAGCT..GCAG
Glyma09g40820.2 1 1 U2 GTCTAGCT..GCAG
Glyma18g44980.1 1 1 U2 GTCTAGCT..GCAG
5: 111-111
LOC_Os07g12490.1 2 0 U2 GTATGTAT..ACAG
estExt_Genewise1Plus.C_chr_21433 2 0 U2 GTAGGTGT..ACAG
GRMZM2G472052_T01 2 0 U2 GTAGGTGT..ACAG
GRMZM2G472052_T02 2 0 U2 GTAGGTGT..ACAG
GSVIVP00033645001 2 0 U2 GTAATTGT..ACAG
estExt_fgenesh4_pm.C_280159 2 0 U2 GTAATTGC..GCAG
Glyma03g00370.1 2 0 U2 GTGACTGC..ACAG
Glyma16g34750.1 2 0 U2 GTGACTGC..ACAG
AC169178_21.2 2 0 U2 GTGACTGC..ACAG
Glyma09g40820.1 2 0 U2 GTGACTGC..AAAG
Glyma09g40820.2 2 0 U2 GTGACTGC..GCAG
Glyma18g44980.1 2 0 U2 GTGACTGC..GCAG
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
PPPGTSMDWQGAPPSHGSYIVKKIVRMEVPVDAYPNFNFVGRILGPRGNSLKRVEASTGC
PPPGTSMDWQGAPPSPGSYIVKKIMRLEVPVDSYPNFNFVGRILGPRGNSLKRVESSTGC
PPPGTSMDWQGAPPSPGSYIVKKIMRLEVPVDSYPNFNFVGRILGPRGNSLKRVESSTGC
PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC
PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC
PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC
GTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGC
GPHGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
GPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
GTPGMAMDWQVAPASPSSYTVKRILRLEIPVDAYPNFNFVGRLLGPRGNSLKRVEASTGC
GTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEASTGC
GPPGMNMDWQSAPASPSSFTVKRILRLEIPVDTFPNFNFVGRLLGPRGNSLKRVEATTGC
GPPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
GAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
GAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
GPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC
6: 155-155
LOC_Os07g12490.1 3 0 U2 GTATGTGT..CCAG
estExt_Genewise1Plus.C_chr_21433 3 0 U2 GTACTGCC..ATAG
GRMZM2G472052_T01 3 0 U2 GTACTGCC..CTAG
GRMZM2G472052_T02 3 0 U2 GTACTGCC..CTAG
GSVIVP00033645001 3 0 U2 GTAAGAGC..TTAG
estExt_fgenesh4_pm.C_280159 3 0 U2 GTATGTAC..TTAG
Glyma03g00370.1 3 0 U2 GTAAGCTC..TCAG
Glyma16g34750.1 3 0 U2 GTAAGCTC..TTAG
AC169178_21.2 3 0 U2 GTAAGCTT..TTAG
Glyma09g40820.1 3 0 U2 GTAAGCTT..TCAG
Glyma09g40820.2 3 0 U2 GTAAGCTT..TCAG
Glyma18g44980.1 3 0 U2 GTAAGCTT..TCAG
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
RVFIRGKGSIKDADKEEKLKGKPGYEHLNDPLHILIEAELPANIIDTRLRQAQEIMDELL
RVFIRGKGSVKDTEKEDKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL
RVFIRGKGSVKDTEKEDKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL
RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANVIDTRLRQAQEVMEELL
RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL
RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL
RVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELL
RVYIRGKGSIKDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANIVDIRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELL
RVYIRGKGSIKDPEKEDKLRGRPGYEHLNENLHILIEADLPANVVDIRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDVRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELL
RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELL
7: 194-194
LOC_Os07g12490.1 4 0 U2 GTAACAAA..ATAG
estExt_Genewise1Plus.C_chr_21433 4 0 U2 GTAACCAA..TCAG
GRMZM2G472052_T01 4 0 U2 GTAACCAA..TTAG
GRMZM2G472052_T02 4 0 U2 GTAACCAA..TTAG
GSVIVP00033645001 4 0 U2 GTACTCAA..CAAG
estExt_fgenesh4_pm.C_280159 4 0 U2 GTAGTATA..AAAG
Glyma03g00370.1 4 0 U2 GTAATGAA..AAAG
Glyma16g34750.1 4 0 U2 GTAATGAT..ACAG
AC169178_21.2 4 0 U2 GTACTATC..CAAG
Glyma09g40820.1 4 0 U2 GTAATGAA..GAAG
Glyma09g40820.2 4 0 U2 GTAATGAA..GAAG
Glyma18g44980.1 4 0 U2 GTAATGAA..TAAG
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
KPVDESQDYYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK---------
KPVDESQDLYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK---------
KPVDESQDLYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRANQASRERFQA
KPVEESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK---------
KPVDESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGSMKRAK---PSQASQ
KPVDESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGSMKRAK---------
KPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPK---------
KPVDESQDFIKRQQLRELALLNS-NFREESPGPS--GSVSPFNTSGMKRAK---------
KPVDESQDFIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNTSGMKRAK---------
KPVEESEDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVEESEDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVDESQDFIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVDESQDFIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVDESQDYIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVDESQDYIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
KPVDESQDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------
8: 242-242
LOC_Os07g12490.1 5 0 U2 GTATTAAT..GCAG
estExt_Genewise1Plus.C_chr_21433 5 0 U2 GTAAGTTC..GTAG
GRMZM2G472052_T01 5 0 U2 GTAAGTTT..GTAG
GRMZM2G472052_T02 5 0 U2 GTAAGTTT..GTAG
GSVIVP00033645001 5 0 U2 GTATTTAC..GCAG
estExt_fgenesh4_pm.C_280159 5 0 U2 GTATCCGT..GCAG
Glyma03g00370.1 5 0 U2 GTAAGTTC..GCAG
Glyma16g34750.1 5 0 U2 GTAAGTTA..ACAG
AC169178_21.2 5 0 U2 GTATGTTC..ACAG
Glyma09g40820.1 5 0 U2 GTATGCTC..GCAG
Glyma09g40820.2 5 0 U2 GTATGCTC..GCAG
Glyma18g44980.1 5 0 U2 GTATGCTC..GCAG
9: 296-296
GRMZM2G472052_T01 6 0 U2 TAGAGGGA..CTCG
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
-------------------------------------------------------PSH--
-------------------------------------------------------PSQ--
LLHPPPLQSFLVQHQQGVPALEPALLRVVGACVRKKRYMHFAAAGRTGGRDEEEIAGR--
-------------------------------------------------------PSQ--
ARPVSSAAAGVWRAGTRPPQPDRFLRFPEPDIRAHTGSGTNRGSDGEEMTHCFSLPGSRG
-------------------------------------------------------PSQ--
-------------------------------------------------------TGC--
-------------------------------------------------------TGR--
-------------------------------------------------------TGR--
-------------------------------------------------------TGR--
-------------------------------------------------------TGR--
-------------------------------------------------------PGR--
-------------------------------------------------------PGR--
-------------------------------------------------------TGR--
-------------------------------------------------------TGR--
-------------------------------------------------------TGR--
Os~LOC_Os07g12490.1
Zm~GRMZM2G063643_T01
Zm~GRMZM2G063643_T02
Sb~estExt_Genewise1Plus.C_chr_21433
Zm~GRMZM2G472052_T01
Zm~GRMZM2G472052_T02
At~AT2G38610.1
Vv~GSVIVP00033645001
Pt~estExt_fgenesh4_pm.C_280159
Gm~Glyma03g00370.1
Gm~Glyma16g34750.1
Mt~AC169178_21.2
Lj~LjT28H07.110.nc
Gm~Glyma09g40820.1
Gm~Glyma09g40820.2
Gm~Glyma18g44980.1
-----------------
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GDASRFFGGSVGRGGGG
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