SRGD	Gene ID 341	BLASTp at NCBI	n/a	n/a		Organisms At ,Vv ,Mt ,Os ,Gm ,Zm ,Lj ,Sb ,Pt Gene count 16 Cintron count 13 Cintron classes U2 ,im ,absent ,em
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	MSGGLYNHQG--FSPARTLSPQIRSNPEAD-SQYLSELLAEHHKLGPFMQVLPICSRLLN -MSGLYN-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN -MSGLYN-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN -MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN -MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN -MSGLYS-QG--FSPARTLSPQIRSNPDAD-SQYLAELLAEHQKLGPFMQVLPICSRLLN -MSGLYN-NSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLN -MSGLYN-HN--FSPARAVSPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN -MSGLYN-PN--FSPARAASPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPTCSRLLN -MSGLYN-SN--FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKLGPFMQALPICSRLLN -MSGLYN-SN--FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKFGPFMQALPICSRLLN -MSGLYN-QN--FSHARAASPQIRPSSEVD-SQYLSELLAEHQKLGPFLQVLPICSRLLN -MSGLYN-PN--YSPARAASPQIRSTPE-D-SQYLQELLAEHQKLGPFTQVLPICNRLIN -MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN -MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN -MSGLYN-PN--FSPARAASPQIRSNPEVD-SQYLSELLAEHQKLGPFMQVLPICSRLLN	2: 1-1 AT2G38610.1 0 0 U2 .. 3: 29-29 LOC_Os07g12490.1 0 2 U2 GTACGGCC..GCAG estExt_Genewise1Plus.C_chr_21433 0 2 U2 GTACTGAT..GCAG GRMZM2G472052_T01 0 2 U2 GTACTAAT..GCAG GRMZM2G472052_T02 0 2 U2 GTACTAAT..GCAG GSVIVP00033645001 0 2 U2 GTAGGGTT..GTAG estExt_fgenesh4_pm.C_280159 0 2 U2 GTATGCAA..GCAG Glyma03g00370.1 0 2 U2 GTTTGTAT..TCAG Glyma16g34750.1 0 2 U2 GTATTTAT..TCAG AC169178_21.2 0 2 U2 GTATAGTA..GCAG Glyma09g40820.1 0 2 U2 GTGAGTTG..GCAG Glyma09g40820.2 0 2 U2 GTGAGTTG..GCAG Glyma18g44980.1 0 2 U2 GTGAGTTG..GCAG
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	QEIMRVSSMVNDHGFNDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWNGIHQE-RLGFPPP QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF--- QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF--- QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGL--- QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF--- QEIMRVSSMVHDHGFSDLDRRRFRSPSPMSSPIVRPNLHGNGFGPWNGMHQE-RLGF--- QEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLS---- QEIIRVSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQE-RLS---- QEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQE-RLS---- QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQE-RLR---- QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQE-RLR---- QEILRVSGMLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMGAWNSLQQE-RLC---- QEILRVSRMLSNQGFGDFDRLRHRSPSPMASSNIMSNVSGTGLGGWNSLQQE-RFS---- QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQEQRLC---- QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQE-RLC---- QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQE-RLC----	4: 60-60 LOC_Os07g12490.1 1 1 U2 GTGAGATC..TTAG estExt_Genewise1Plus.C_chr_21433 1 1 U2 GTGAGATC..GTAG GRMZM2G472052_T01 1 1 U2 GTGAGAGA..GTAG GRMZM2G472052_T02 1 1 U2 GTGAGAGA..GTAG GSVIVP00033645001 1 1 U2 GTTTGTTT..GCAG estExt_fgenesh4_pm.C_280159 1 1 U2 GTTAGTTC..GTAG Glyma03g00370.1 1 1 U2 GTTTCTTT..GCAG Glyma16g34750.1 1 1 U2 GTTTCTTT..GCAG AC169178_21.2 1 1 U2 GTCTGTTC..GCAG Glyma09g40820.1 1 1 U2 GTCTAGCT..GCAG Glyma09g40820.2 1 1 U2 GTCTAGCT..GCAG Glyma18g44980.1 1 1 U2 GTCTAGCT..GCAG 5: 111-111 LOC_Os07g12490.1 2 0 U2 GTATGTAT..ACAG estExt_Genewise1Plus.C_chr_21433 2 0 U2 GTAGGTGT..ACAG GRMZM2G472052_T01 2 0 U2 GTAGGTGT..ACAG GRMZM2G472052_T02 2 0 U2 GTAGGTGT..ACAG GSVIVP00033645001 2 0 U2 GTAATTGT..ACAG estExt_fgenesh4_pm.C_280159 2 0 U2 GTAATTGC..GCAG Glyma03g00370.1 2 0 U2 GTGACTGC..ACAG Glyma16g34750.1 2 0 U2 GTGACTGC..ACAG AC169178_21.2 2 0 U2 GTGACTGC..ACAG Glyma09g40820.1 2 0 U2 GTGACTGC..AAAG Glyma09g40820.2 2 0 U2 GTGACTGC..GCAG Glyma18g44980.1 2 0 U2 GTGACTGC..GCAG
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	PPPGTSMDWQGAPPSHGSYIVKKIVRMEVPVDAYPNFNFVGRILGPRGNSLKRVEASTGC PPPGTSMDWQGAPPSPGSYIVKKIMRLEVPVDSYPNFNFVGRILGPRGNSLKRVESSTGC PPPGTSMDWQGAPPSPGSYIVKKIMRLEVPVDSYPNFNFVGRILGPRGNSLKRVESSTGC PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC PPPGTSMDWQGAPPSPGSYIVKKIVRLEVPVDSYPNFNFVGRILGPRGNSLKRVEASTGC GTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGC GPHGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC GPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC GTPGMAMDWQVAPASPSSYTVKRILRLEIPVDAYPNFNFVGRLLGPRGNSLKRVEASTGC GTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEASTGC GPPGMNMDWQSAPASPSSFTVKRILRLEIPVDTFPNFNFVGRLLGPRGNSLKRVEATTGC GPPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC GAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC GAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC GPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC	6: 155-155 LOC_Os07g12490.1 3 0 U2 GTATGTGT..CCAG estExt_Genewise1Plus.C_chr_21433 3 0 U2 GTACTGCC..ATAG GRMZM2G472052_T01 3 0 U2 GTACTGCC..CTAG GRMZM2G472052_T02 3 0 U2 GTACTGCC..CTAG GSVIVP00033645001 3 0 U2 GTAAGAGC..TTAG estExt_fgenesh4_pm.C_280159 3 0 U2 GTATGTAC..TTAG Glyma03g00370.1 3 0 U2 GTAAGCTC..TCAG Glyma16g34750.1 3 0 U2 GTAAGCTC..TTAG AC169178_21.2 3 0 U2 GTAAGCTT..TTAG Glyma09g40820.1 3 0 U2 GTAAGCTT..TCAG Glyma09g40820.2 3 0 U2 GTAAGCTT..TCAG Glyma18g44980.1 3 0 U2 GTAAGCTT..TCAG
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	RVFIRGKGSIKDADKEEKLKGKPGYEHLNDPLHILIEAELPANIIDTRLRQAQEIMDELL RVFIRGKGSVKDTEKEDKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL RVFIRGKGSVKDTEKEDKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANVIDTRLRQAQEVMEELL RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL RVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANIVDTRLRQAQEVMEELL RVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELL RVYIRGKGSIKDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANIVDIRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELL RVYIRGKGSIKDPEKEDKLRGRPGYEHLNENLHILIEADLPANVVDIRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDVRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELL RVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELL	7: 194-194 LOC_Os07g12490.1 4 0 U2 GTAACAAA..ATAG estExt_Genewise1Plus.C_chr_21433 4 0 U2 GTAACCAA..TCAG GRMZM2G472052_T01 4 0 U2 GTAACCAA..TTAG GRMZM2G472052_T02 4 0 U2 GTAACCAA..TTAG GSVIVP00033645001 4 0 U2 GTACTCAA..CAAG estExt_fgenesh4_pm.C_280159 4 0 U2 GTAGTATA..AAAG Glyma03g00370.1 4 0 U2 GTAATGAA..AAAG Glyma16g34750.1 4 0 U2 GTAATGAT..ACAG AC169178_21.2 4 0 U2 GTACTATC..CAAG Glyma09g40820.1 4 0 U2 GTAATGAA..GAAG Glyma09g40820.2 4 0 U2 GTAATGAA..GAAG Glyma18g44980.1 4 0 U2 GTAATGAA..TAAG
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	KPVDESQDYYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK--------- KPVDESQDLYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK--------- KPVDESQDLYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRANQASRERFQA KPVEESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGGMKRAK--------- KPVDESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGSMKRAK---PSQASQ KPVDESQDFYKRQQLRELAMLNS-TLREDSPHP---GSVSPFSNGSMKRAK--------- KPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPK--------- KPVDESQDFIKRQQLRELALLNS-NFREESPGPS--GSVSPFNTSGMKRAK--------- KPVDESQDFIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNTSGMKRAK--------- KPVEESEDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVEESEDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVDESQDFIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVDESQDFIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVDESQDYIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVDESQDYIKRQQLRELALLNS-NFREESPGPS--GSVSPFNSSGMKRAK--------- KPVDESQDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAK---------	8: 242-242 LOC_Os07g12490.1 5 0 U2 GTATTAAT..GCAG estExt_Genewise1Plus.C_chr_21433 5 0 U2 GTAAGTTC..GTAG GRMZM2G472052_T01 5 0 U2 GTAAGTTT..GTAG GRMZM2G472052_T02 5 0 U2 GTAAGTTT..GTAG GSVIVP00033645001 5 0 U2 GTATTTAC..GCAG estExt_fgenesh4_pm.C_280159 5 0 U2 GTATCCGT..GCAG Glyma03g00370.1 5 0 U2 GTAAGTTC..GCAG Glyma16g34750.1 5 0 U2 GTAAGTTA..ACAG AC169178_21.2 5 0 U2 GTATGTTC..ACAG Glyma09g40820.1 5 0 U2 GTATGCTC..GCAG Glyma09g40820.2 5 0 U2 GTATGCTC..GCAG Glyma18g44980.1 5 0 U2 GTATGCTC..GCAG 9: 296-296 GRMZM2G472052_T01 6 0 U2 TAGAGGGA..CTCG
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	-------------------------------------------------------PSH-- -------------------------------------------------------PSQ-- LLHPPPLQSFLVQHQQGVPALEPALLRVVGACVRKKRYMHFAAAGRTGGRDEEEIAGR-- -------------------------------------------------------PSQ-- ARPVSSAAAGVWRAGTRPPQPDRFLRFPEPDIRAHTGSGTNRGSDGEEMTHCFSLPGSRG -------------------------------------------------------PSQ-- -------------------------------------------------------TGC-- -------------------------------------------------------TGR-- -------------------------------------------------------TGR-- -------------------------------------------------------TGR-- -------------------------------------------------------TGR-- -------------------------------------------------------PGR-- -------------------------------------------------------PGR-- -------------------------------------------------------TGR-- -------------------------------------------------------TGR-- -------------------------------------------------------TGR--
Os~LOC_Os07g12490.1 Zm~GRMZM2G063643_T01 Zm~GRMZM2G063643_T02 Sb~estExt_Genewise1Plus.C_chr_21433 Zm~GRMZM2G472052_T01 Zm~GRMZM2G472052_T02 At~AT2G38610.1 Vv~GSVIVP00033645001 Pt~estExt_fgenesh4_pm.C_280159 Gm~Glyma03g00370.1 Gm~Glyma16g34750.1 Mt~AC169178_21.2 Lj~LjT28H07.110.nc Gm~Glyma09g40820.1 Gm~Glyma09g40820.2 Gm~Glyma18g44980.1	----------------- ----------------- ----------------- ----------------- GDASRFFGGSVGRGGGG ----------------- ----------------- ----------------- ----------------- ----------------- ----------------- ----------------- ----------------- ----------------- ----------------- -----------------