SRGD Gene ID 336 BLASTp at NCBI n/a n/a  
OrganismsPp ,Sb ,Lj ,Vv ,Pt ,Os ,Gm ,At ,Zm
Gene count16
Cintron count4
Cintron classesU2 ,absent ,im ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
MSNPKGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKS-SKT
MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPSKS-SKT
MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPSKS-SKT
MSNPKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRRLPPSKS-SKA
MSISKTSKLLLYINWRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKG--KT
MSISKTSKLLLYINWRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKG--KT
MSISKTSKLLLYINWRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKG--KT
MSMSKTSKLLLYINWRIRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKG--KS
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKI
MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG--KK
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKN
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
TG--EREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAGAGAAMAGPGVGRAAGRGV
TG--DREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAAAGGALAGPGVGRAAGRGV
TG--EREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAAAGGALAGPGIGRAAGRGV
TG--EREERRTLGLLLLRGEEVVSMTVEGPPPPDESRAKAAAAGGALAGPGVGRAAGRGV
QE--EREERRTLGLLLLRGEEVISMTVEGPPPPDESRAKAAAA-AA-GGPGVGRAAGRGI
QE--EREERRTLGLLLLRGEEVISMTVEGPPPPDESRAKAAAA-AA-GGPGVGRAAGRGI
QE--EREERRTLGLLLLRGEEVISMTVEGPPPPDESRAKAAAA-AA-GGPGVGRAAGRGI
QE--EKEERRTLGLLLLRGEEVISMTVEGPPPPDESRAKAAAA-VA-GGPGVGRAAGRGI
NE--EREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSA-AAVAGPGIGRAAGRGV
NE--EREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSV-TAVAGPGIGRAAGRGV
NE--EREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGA-AAMAGPGIGRAAGRGI
NE--EREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSA-AAVAGPGLGRAAGRGI
SD-ADREDRRTLGLVLLRGEEVVSMTVEGPPPPEESRSKAVNA-AALAGPGIGRAAGRGI
AEGGDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGA-AALAGPGIGRAAGRGI
AEGGDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGA-AALAGPGIGRAAGRGI
AEGADREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGA-AALAGPGIGRAAGRGI
2: 83-83
Sb02g003850 0 1 U2 G..G
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
PAGQMLQAQPGLAGPVRGVGGPAPGMMQPQISRPPMPNLSAPPVAYPQ----------VV
PTGPLLQAAPGLAGPVRGVGGPAPGMMQPQISRPPMPNLSAQPVSYPQ----------VV
PTGPLLQAAPGLAGPVRGVGGPAPGMMQPQISRPPMPNLSAQPVSYPQ----------VV
PTGPLLQAAPGLAGPVRGVGGPAPGMMQPQISRPPMPNLSAQPVSYPQ----------VV
PTAPLNQAQPGLAGPARGVGGPAPGMMQP-------------------------------
PTAPLNQAQPGLAGPARGVGGPAPGMMQP-------------------------------
PTAPLNQAQPGLAGPARGVGGPAPGMMQP-------------------------------
PTAPLNQAQPGLAGPARGVGGPAPGMMQPR------PQVSAAPI----------------
PTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISRP--PQLSAPPI---------------I
PTGPLVQAQPGLSGPVRGIGGPAPGMMQPQISRP--PQ-----I---------------I
PTAPLIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPA--------APVI
PTAPLVQAQPGLAGPVRGVGGPSPGMMQPQLSR---PQLSAPPMTYPAGSGLPTGGAPIL
PAAPVIQAQPGLAGPVRGVGGPAPGMMQPQISRP--PQLSAPPVSYPP-------NAPGM
PPAPVVQAQPGLAGPVRGMGGPAPGMMQPQISRP--PQLNAPPVSYPG------GGPPVM
PPAPVVQAQPGLAGPVRGMGGPAPGMMQPQISRP--PQLNAPPVSYPG------GGPPVM
PPAPVVQAQPGLAGPVRGVGGPAPGMMQPQISRP--PQLNAPPVSYPG------GGPPVM
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
RPP---------PGQ-MPPPMRP---PQMP---IPFQRPP----GVPPA-FPGGPP----
RPPQGM-----------PPPMRPGMQPQMP---MPF-RPP----GVPPAPFPGAPQ----
RPPQGM-----------PPPMRPGMPPQMQ---MPF-RPP----GAPPAPFPGAPPQ---
RPPQGM-----------PPPMRPGMPPQMP---MQF-RPP----GAPPAPFPGAPPQ---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
RPPGQMLPPPPFGGQ-GPP-MGRGPPPP-----YGM-RPPPQQFSGPP------PPQYG-
RPPGQMPPQPPFAGQ-G------GPPPP-----YGM-RPP---YPGPP------PPQYGG
RPPGQM---PGYPGQ-APPQIARGPPPPVP-AQFAA-RPG----GAPQPPFQVPPPQYG-
RPPGQM-PPMPYPGQ-GPP-MGRGPPPP--------------------------------
RPPGQM---PGYPGQ-GPPQMGRGPPQPMPPGQFAP-RP-----GGPPPQYGV-PPQFG-
RPPGQM------PGQFAPPPMARGPPPPMPPGQFAPQRP-----GGPPPQFQV-PPQFG-
RPPGQM------PGQFAPPPMARGPPPPMPPGQFAPQRP-----GGPPPQFQV-PPQFG-
RPPGQM------PGQFAPPPMARGPPPPMPPGQFAPPRP-----GGPPPQFQVPPPQFG-
3: 207-207
gw1.XI.1022.1 0 1 U2 GTCCACCT..AGAG
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
-------PPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPP------F---RPGMP
-----------QFMRGPTPMGPPQVRPGMPGPPPPGMRPGMAPPP------FGQPRPGMQ
-----------QFMRGPPPMGPPQVRPGMPGPPPPGMRPGMPPPP------FGQPRPGMP
-----------QYMRGPPPMGPPQVRPGMPGPPPPGMRPGMPPPP------FGQPRPGMP
-------------------------------------RP---------------------
-------------------------------------RP---------------------
-------------------------------------RP---------------------
------------------------------------------------------------
-QRP-MIPPPGGMMRGPPP--PP--H-GMQGPPPP--RPGMPPAPG-G---FAPPRPGMP
QQRPMMIPPPGGMMRG-PP--PP--H-GMQGPPPS--RPGMPP-PG-GAPMFAPPHPGMP
-GRPMVPPP--QMMRGPPP--PP--RPGMQAPPPP--RPGMPPPPGSGVPVFGPPRPGMP
---------------GPPA--PP--RPGMPAPPPP--RPGMPLPPGGHVPVFGPPRPGMP
-QRPMGPPPPGQMMRGPPP--PP--RPGMPGPPPP--RPGMPPPPG-GAPVYAPPRPGMP
-QRPMGPPPPGQMVRGPPA--PP--RPGMPAPPPP--RPGMPPPPGSGVPVFGPPRPGMP
-QRPMGPPPPGQMVRGPPA--PP--RPGMPAPPPP--RPGMPPPPGSGVPVFGPPRPGMP
-QRPMGPPPPGQMVRGPPA--PP--RPGMPAPPPP--RPGMPPPPGSGVPVFGPPRPGMP
Os~LOC_Os07g07220.1
Sb~Sb02g003850
Zm~GRMZM2G021149_T01
Zm~GRMZM2G022041_T01
Pp~estExt_Genewise1.C_3330059
Pp~gw1.333.63.1
Pp~gw1.446.24.1
Pp~estExt_fgenesh1_pg.C_320105
At~AT4G20440.1
At~AT5G44500.1
Vv~GSVIVP00002642001
Pt~gw1.XI.1022.1
Lj~chr2.LjT02E02.160.nd
Gm~Glyma14g02940.1
Gm~Glyma14g02940.2
Gm~Glyma02g45830.1
PPPPGPQQPGQNPPQ
TPPPGPQQPGQNPPQ
PPPPGPQQPGQNPPQ
PPPPGPQQPGQNPPQ
---------------
---------------
---------------
---------------
P-----HNQQQ----
PAPPNHHNQQH----
PPPNPPQQQ------
PPP------------
PPPNSQNQQQQ----
PPPNPPNQQQQ----
PPPNPPNQQQQ----
PPPNPPNQQQQ----


3' UTR introns