SRGD	Gene ID 31	BLASTp at NCBI	n/a	n/a		Organisms Gm ,Zm ,At ,Os ,Pt ,Sb ,Vv ,Mt ,Pp ,Lj Gene count 46 Cintron count 13 Cintron classes U2 ,GC ,im ,absent ,em
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLD- MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALN- MSRVYVGNLDPRATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALN- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDID- MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLD- MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLD- MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLD- MARLYIGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLD- MARLYVGNLDPRVTARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLD- MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLD- MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLD- MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLD- MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MARVYVGNLDPRVTAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELD- MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALD- MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVD- MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALD- MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALD- MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALD- MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALD- MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALD- MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALD- MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALD- MSRVYVGNLDPRVSERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALD- MTRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELD- MSRVYVGNLDPRVSERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDA MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELD-	2: 0-0 AT1G23860.1 0 0 U2 .. 3: 28-28 GSVIVP00028848001 0 2 U2 GTGATTCC..TCAG e_gw1.207.127.1 0 2 U2 GTTTGTTG..TCAG e_gw1.332.33.1 0 2 U2 GTTTGTTA..TCAG LOC_Os06g08840.1 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.2 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.3 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.4 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.5 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.6 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.7 1 2 U2 GTTAGTGA..GCAG LOC_Os06g08840.8 1 2 U2 GTTAGTGA..GCAG GRMZM2G151923_T01 1 2 U2 GTCAGTAG..GCAG GRMZM2G151923_T02 1 2 U2 GTCAGTAG..GCAG GRMZM2G151923_T03 0 2 U2 GTCAGTAG..GCAG GRMZM2G151923_T04 1 2 U2 GTCAGTAG..GCAG estExt_fgenesh1_pg.C_chr_100625 1 2 U2 GTCAGTGC..TCAG LOC_Os02g39720.2 1 2 U2 GTGTGAGA..GCAG LOC_Os02g39720.3 1 2 U2 GTGTGAGA..GCAG LOC_Os02g39720.4 1 2 U2 GTGTGAGA..GCAG LOC_Os02g39720.6 0 2 U2 GTGTGAGA..GCAG GRMZM2G027105_T01 1 2 U2 GTGAGATG..GCAG GRMZM2G027105_T03 0 2 U2 GTGAGATG..GCAG GRMZM2G027105_T04 1 2 U2 GTGAGATG..GCAG GRMZM2G027105_T05 1 2 U2 GTGAGATG..GCAG GRMZM2G027105_T07 1 2 U2 GTGAGATG..GCAG GRMZM2G027105_T08 1 2 U2 GTGAGATG..GCAG GRMZM2G027105_T06 0 2 U2 GTGAGATG..GCAG AT2G24590.1 1 2 U2 GTACATAA..GCAG AT4G31580.1 1 2 U2 GTAAGAAT..GCAG gw1.XIX.900.1 0 2 U2 GTAATTTC..GCAG Glyma08g39830.1 1 2 U2 GTAATTTC..ATAG Glyma08g39830.2 1 2 U2 GTAATTTC..ATAG Glyma08g39830.3 1 2 U2 GTAATTTC..ATAG Glyma08g39830.4 1 2 U2 GTAATTTC..ATAG Glyma18g18860.1 1 1 U2 GGTAATTC..TGCA CR936368_46.2 0 2 U2 GTAACTCA..GTAG Glyma17g29080.2 1 2 U2 GTAAATTA..GCAG Glyma17g29080.1 1 2 U2 GTAAATTA..GCAG Glyma14g17930.3 1 2 U2 GTAAATTA..GCAG Glyma14g17930.2 1 2 U2 GTAAATTA..GCAG Glyma14g17930.1 1 2 U2 GTAAATTA..GCAG Glyma14g17930.4 1 2 U2 GTAAATTA..GCAG gw1.XVIII.2163.1 0 2 U2 GTTGATTT..GTAG eugene3.01470005 1 2 U2 GTTGACTT..GTAG 4: 58-58 GSVIVP00028848001 1 1 U2 GTGAGTAC..ACAG e_gw1.207.127.1 1 1 U2 GTATGTTC..ATAG e_gw1.332.33.1 1 1 U2 GTATGTTC..GTAG LOC_Os06g08840.1 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.2 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.3 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.4 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.5 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.6 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.7 2 1 U2 GTATGTGA..ATAG LOC_Os06g08840.8 2 1 U2 GTATGTGA..ATAG GRMZM2G151923_T01 2 1 U2 GTATGTGA..GTAG GRMZM2G151923_T02 2 1 U2 GTATGTGA..GTAG GRMZM2G151923_T03 1 1 U2 GTATGTGA..GTAG GRMZM2G151923_T04 2 1 U2 GTATGTGA..GTAG estExt_fgenesh1_pg.C_chr_100625 2 1 U2 GTATGTGA..GTAG LOC_Os02g39720.2 2 1 U2 GTAATAAG..ATAG LOC_Os02g39720.3 2 1 U2 GTAATAAG..ATAG LOC_Os02g39720.4 2 1 U2 GTAATAAG..ATAG LOC_Os02g39720.6 1 1 U2 GTAATAAG..ATAG GRMZM2G027105_T01 2 1 U2 GTACTTAA..ATAG GRMZM2G027105_T03 1 1 U2 GTACTTAA..ATAG GRMZM2G027105_T04 2 1 U2 GTACTTAA..ATAG GRMZM2G027105_T05 2 1 U2 GTACTTAA..ATAG GRMZM2G027105_T07 2 1 U2 GTACTTAA..ATAG GRMZM2G027105_T08 2 1 U2 GTACTTAA..ATAG GRMZM2G027105_T06 1 1 U2 GTACTTAA..ATAG AT2G24590.1 2 1 U2 GTATTCGT..GTAG AT4G31580.1 2 1 U2 GTAATGAT..ATAG gw1.XIX.900.1 1 1 U2 GTTTGTAT..ACAG Glyma08g39830.1 2 1 U2 GTAAGTAT..ACAG Glyma08g39830.2 2 1 U2 GTAAGTAT..ACAG Glyma08g39830.3 2 1 U2 GTAAGTAT..ACAG Glyma08g39830.4 2 1 U2 GTAAGTAT..ACAG Glyma18g18860.1 2 0 U2 GGTAAGTA..TATA CR936368_46.2 1 1 U2 GTATGTTT..GCAG Glyma17g29080.2 2 1 U2 GTATGTTT..GCAG Glyma17g29080.1 2 1 U2 GTATGTTT..GCAG Glyma14g17930.3 2 1 U2 GTATGTTC..GCAG Glyma14g17930.2 2 1 U2 GTATGTTC..GCAG Glyma14g17930.1 2 1 U2 GTATGTTC..GCAG Glyma14g17930.4 2 1 U2 GTATGTTC..GCAG gw1.XVIII.2163.1 1 1 U2 GTACGCTT..GGAG eugene3.01470005 2 1 U2 GTATGTGT..GCAG
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	GKSGWRVELSHNSKG------GGGGGGGGGGR----DREDLKCYECGEPGHFARECRLRI GKNGWRVELSRS---------SGGGGGPRGR-----GGDDMKCYECGEPGHFARECRLRI GKNGWRVELSRS---------SGGGGGPRGR-----GGDDMKCYECGEPGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GSSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASGGRGGRDRH----GGSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASGGRGGRDRH----GGSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASGGRGGRDRH----GGSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASGGRGGRDRH----GGSESKCYECGETGHFARECRLRI GKNGWRVELSRN---------ASSGRGGRDRY----GGSESKCYECGETGHFARECRLRI GKNGWRVELSTK---------AGSGR-GRDRS----GGSDMKCYECGEPGHFARECRLRI GKNGWRVELSTK---------AGSGR-GRDRS----GGSDMKCYECGEPGHFARECRLRI GKNGWRVELSTK---------AGSGR-GRDRS----GGSDMKCYECGEPGHFARECRLRI GKNGWRVELSTK---------AGSGR-GRDRS----GGSDMKCYECGEPGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI GKNGWRVELSTK---------VGGGR-GRDR-----NGSDMKCYECGEAGHFARECRLRI RKNGWRVELSHK---------DKGGRGGGGGRRG--GIEDSKCYECGELGHFARECR--- GKNGWRVEQSHN-RG--GGGGRGGGRGGGDGGR-GRGGSDLKCYECGESGHFARECRSRG GKNGWRVEQSHN-RGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRG GKNGWRVELSHNSK-------GGGGRSGDGHGRG--GGEDSKCYECGEPGHFARECRLRI GKNGWRVELSHNSKG------GGGGRGGGRGR----GGEDLKCYECGEPGHFARECRSRG GKNGWRVELSHN--------SKGGGRGGRGR-----GGEDTKCYECGEPGHFARECRLRI GKNGWRVELSHN--------SKGGGRGGRGR-----GGEDTKCYECGEPGHFARECRLRI GKNGWRVELSHN--------SKGGGRGGRGR-----GGEDTKCYECGEPGHFARECRLRI GKNGWRVELSHN--------SKGGGRGGRGR-----GGEDTKCYECGEPGHFARECRLRI GKNGWRVELSHN--------SKGGGRGGRGR-----GGEDTKCYECGEPGHFARECRLRI GKNGWRVELSHNSKTGGGGGGRGGGGGGGGRGRSGGGGSDLKCYECGEPGHFARECNSSR GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG------GGGGRGGRS------GGSDLKCYECGEPGHFARECRMRG GKNGWRVELSHNSRG--GGGGGGGGGGGRGGGRGRSGGSDLKCYECGEAGHFARECRLRV GKNGWRVELSHN-----SRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLRV	5: 96-96 GSVIVP00028848001 2 1 U2 GTGGACGT..GGAG
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	GSRGMGTLAL---------------------VLVGVQVMGAGA----------------- GAGGLGSGGR------------GKSPRASP-RYRRSPSYG-GR-RSKS-------SPRLR GAGGLGTGGR------------GKSPRASP-RYRRSPSYGARRSKS---------SPRLR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAGR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAAR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAAR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAAR---SPRRR GSGGLGSGRR---------RSRSRSRSRSP-RYRRSPSYG--R-RSYSPAAR---SPRRR GSGGLGSGRR-------RSRSRSRSRSRSP-RYRRSPSYG--R-RSYSPAAR---SPRRR GSGGLGSGRRRSRSRSRSPRYRGRSRSRSP-RYRRSPSYG--R-RSYSPRDR---SPKRR GSGGLGSGRRRSRSRSRSPRYRGRSRSRSP-RYRRSPSYG--R----SPRDR---SPKRR GSGGLGSGRRRSRSRSRSPRYRGRSRSRSP-RYRRSPSYG--R----SPRDR---SPKRR GSGGLGSGRRRSRSRSRSPRYRGRSRSRSP-RYRRSPSYG--R----SPRDR---SPKRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----SPRDR---SPRRR GSGGLGSGRR----RSRSPRYRSRSRSRSP-RYRRSPSYS--R----------------- --RGRGSVRR---------------RSPSP-RRRRSPDYGYAR-RSISPRGRRS-PPRRR GSG----GRR-----------RSRSRSRSPPRYRKSPTYG-GR-RSYSPRARSPPPPRRR GT-----GRR-----------RSKSRSRTPPRYRRSPSYG--R-RSYSPRARSPPPPRRR GSRGLGSSRR---------------RSPSP-RRRGSPSYGYGR-RSYSPRERR--SPRRR GSRGLGSGRR---------------RSPSPYRRRRSPSYGYGR-R--------------- GSRGLGSGRR---------------RSPSPYRRRRSPSYGYDR-SSYSPRGRR--SPRRR GSRGLGSGRR---------------RSPSPYRRRRSPSYGYDR-SSYSPRGRR--SPRRR GSRGLGSGRR---------------RSPSPYRRRRSPSYGYDR-SSYSPRGRR--SPRRR GSRGLGSGRR---------------RSPSPYRRRRSPSYGYDR-SSYSPRGRR--SPRRR GSRGLGSGRR---------------RSPSPYRRRRSPSYGYDR-RSYSPRGRR--SPRRR G----GSGRR---------------RSRSPPRFRRSPSYG--R-RSYSPRER---SPRRR GS-----GRR---------------RSRSPPRFRRSPSYG--R----SPRGR---SPRRR GS-----GRR---------------RSRSPPRFRRSPSYG--R-RSYSPRGR---SPRRR GS-----GRR---------------RSRSPPRFRRSPSYG--R-RSYSPRGR---SPRHR GS-----GRR---------------RSRSPPRFRRSPSYG--R----SPRGR---SPRHR GS-----GRR---------------RSRSPPRFRRSPSYG--R-RSYSPRGR---SPRHR GS-----GRR---------------RSRSPPRFRRSPSYG--R-RSYSPRGR---SPRHR GSGGGGGGGG-----------AGRRRSRSP-RYRRSPSYG--RSRSHSPQGR---SPKRR GSG--GGGRR---------------RSRSP-RYRRSPSYG--R-RSYSPRGR---SPKRR	6: 125-125 GSVIVP00028848001 3 1 U2 GTGGACGG..GAAG 7: 160-162 GSVIVP00028848001 4 1 U2 GTATATCC..CTAG e_gw1.207.127.1 2 2 U2 GTATCTCC..GAAG e_gw1.332.33.1 2 2 U2 GTACCTCT..GAAG LOC_Os06g08840.1 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.2 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.3 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.4 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.5 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.6 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.7 3 2 U2 GTAATCAA..GCAG LOC_Os06g08840.8 3 2 U2 GTAATCAA..GCAG GRMZM2G151923_T01 3 2 U2 GTGAATGT..ACAG GRMZM2G151923_T02 3 2 U2 GTGAATGT..ACAG GRMZM2G151923_T03 2 2 U2 GTGAATGT..ACAG GRMZM2G151923_T04 3 2 U2 GTGAATGT..ACAG estExt_fgenesh1_pg.C_chr_100625 3 2 U2 GTAAATTT..ACAG LOC_Os02g39720.2 3 2 U2 GTAATGTA..TTAG LOC_Os02g39720.3 3 2 U2 GTAATGTA..ACAG LOC_Os02g39720.4 3 2 U2 GTAATGTA..ACAG LOC_Os02g39720.6 2 2 U2 GTAATGTA..ACAG GRMZM2G027105_T01 3 2 U2 GTAATTTG..ACAG GRMZM2G027105_T03 2 2 U2 GTAATTTG..ACAG GRMZM2G027105_T04 3 2 U2 GTAATTTG..ACAG GRMZM2G027105_T05 3 2 U2 GTAATTTG..ACAG GRMZM2G027105_T07 3 2 U2 GTAATTTG..ACAG GRMZM2G027105_T08 3 2 U2 GTAATTTG..ACAG AT2G24590.1 3 2 U2 GTTATTGT..ACAG AT4G31580.1 3 2 U2 GTCAGTGA..TTAG gw1.XIX.900.1 2 2 U2 GTGCGTCT..GCAG Glyma08g39830.1 3 2 U2 GTGTGTTT..TCAG Glyma08g39830.2 3 2 U2 GTGTGTTT..TCAG Glyma08g39830.3 3 2 U2 GTGTGTTT..TCAG Glyma08g39830.4 3 2 U2 GTGTGTTT..TCAG Glyma18g18860.1 3 1 U2 GGTGTGTT..ATCA CR936368_46.2 2 2 U2 GTGAGATT..CCAG Glyma17g29080.2 3 2 U2 GTCAGATT..ACAG Glyma17g29080.1 3 2 U2 GTCAGATT..CTAG Glyma14g17930.3 3 2 U2 GTCAGATT..CTAG Glyma14g17930.2 3 2 U2 GTCAGATT..ACAG Glyma14g17930.1 3 2 U2 GTCAGATT..CTAG Glyma14g17930.4 3 2 U2 GTCAGATT..CTAG gw1.XVIII.2163.1 2 2 U2 GTGAATTC..GGAG eugene3.01470005 3 2 U2 GTGAATTT..GCAG
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	---------------------------------------------IARM----------- SVS-----------------------------------------PVRRG----------- SVS----------------------------------------PVARRG----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARA----------- SVS------------------------------------------PARG----------- SVS------------------------------------------PARG----------- SVS------------------------------------------PARG----------- SVS------------------------------------------PARG----------- SVS------------------------------------------PARG----------- SYSRS--------------------------------------PPPARA----------- SYSRS--------------------------------------PPPARA----------- SYSRS--------------------------------------PPPARA----------- SYSRS--------------------------------------PPPARA----------- SYSRSPLGSPARSLSRSPPLPPPPPRNNSRSPPGAREVSRSPPPPPPRNNSRSPPAARDV SYSRSPLGSPARSLSRSPPLPPPPPRNNSRSPPGAREVSRSPPPPPPRNNSRSPPAARDV SYSRSPLGSPARSLSRSPPLPPPPPRNNSRSPPGAREVSRSPPPPPPRNNSRSPPAARDV SYSRSPLGSPARSLSRSPPLPPPPPRNNSRSPPGAREVSRSPPPPPPRNNSRSPPAARDV SYSRSPLGSPARSLSRSPPLPPPPPRNNSRSPPGAREVSRSPPPPPPRNNSRSPPAARDV SYSRSPLGSPARSLSRSPPL----------------------PPPPPRNNSRSPPAARDV ------------------------------------------------------------ SVT-----------------------------------------PPRRG----------- SPS-------------------------------------------PRG----------- SPS----------------------------------------PPPARG----------- SLS------------------------------------------PRRG----------- ------------------------------------------------------------ SIS------------------------------------------PPWG----------- SIS------------------------------------------PPWG----------- SIS------------------------------------------PPWG----------- SIS------------------------------------------PPWG----------- SIS------------------------------------------LPRG----------- SPSPR------------------------------------RRSPSPRR----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG----------- SLS------------------------------------------P-RG-----------	8: 226-226 GRMZM2G027105_T08 4 2 U2 AAATAACA..CCAG
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	-------RENLHDVEAYHL---------------VEVA-ATAGHLHIAVLAMIHLLLMGI -------RSPSRSPPPRRD--------------RRGSP-VANGYV--------------- -------RSPSRSPPPRRD--------------RRGSP-VGNGYAASPRRDRRGSPVVNG -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNGY-----RRSRS------ -------RSYSRSPQYNRG--------------RDESPAYDNG----------------- -------RSYSRSPQHKGA--------------REESP-YDNGY-----RRSRS------ -------RSYSRSPQHKGA--------------REESP-YDNGY-----RRSRS------ -------RSYSRSPQHKGA--------------REESP-YDNGY-----RRSRS------ -------RSYSRSPQHKGA--------------REESP-YDNGY-----RRSRS------ -------RSYSRSPQYKRA--------------REDSP-YDNGY-----RRSRS------ -------RSYSRSPPPPRE--RSYSRSPAQPANREESP-YANNA---------------- -------RSYSRSPPPPRE--RSYSRSPAQPANREESP-YANNA---------------- -------RSYSRSPPPPRE--RSYSRSPAQPANREESP-YANNA---------------- -------RSYSRSPPPPRE--RSYSRSPAQPANREESP-YANNA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- SRSPPAARDVSRSPPPPPDARRSYSGSPGQQPQRDESP-YANDA---------------- -------R---------------------------------------------------- -------RSYSRS-PPYRGSRRDSPRRRDSPYGRR-SP-YANGV---------------- -------RNYSRSPPPYRA--------------RDEVP-YANGNGLKDVRRSRS------ -------RSYSRSPPPYRA--------------REEVP-YANGNGLKERRRSRS------ -------RSYSRSPPYRHG--------------RRDSP-YAIG----------------- ------------------------------------------------------------ -------RNYSRS-PPYRP--------------RRDSP-YANAYVYVQLSCSLL------ -------RNYSRS-PPYRP--------------RRDSP-YANAD---------------- -------RNYSRS-PPYRP--------------RRDSP-YANAD---------------- -------RNYSRS-PPYRP--------------RRDSP-YANAD---------------- -------RSYSRSPPYRPS--------------CHDSP-YANGM---------------- -------RSYSRSPPPYRG--------------REDAT-HANGNGIRAAHRSRS------ -------RSYSRS-PPYRG--------------REEVP-YANGNGLRERRRSRS------ -------RSYSRS-PPYRG--------------REEVP-YANGNGLRERRRSRS------ -------RSYSRS-PPYRG--------------REEVP-YANGKGRKNIRHDE------- -------RSYSRS-PPYRG--------------REEVP-YANGNGLRERRRSRS------ -------RSYSRS-PPYRG--------------REEVP-YANGNGLRERRRSRS------ -------RSYSRS-PPYRG--------------REEVP-YANG----------------- -------RSYSRS-PQYRG--------------REELP-YTNGNGTRDRRRSRS------ -------RSYSRS-PQYRG--------------REELP-YANGNGIRDRRRSRS------	9: 281-281 LOC_Os06g08840.1 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.2 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.3 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.4 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.5 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.6 4 2 U2 GTAATGCA..TCAG LOC_Os06g08840.7 4 2 U2 GTAATGCA..TCAG GRMZM2G151923_T01 4 2 U2 GTAATGCA..CCAG GRMZM2G151923_T02 4 2 U2 GTAATGCA..CCAG GRMZM2G151923_T03 3 2 U2 GTAATGCA..CCAG GRMZM2G151923_T04 4 2 U2 GTAATGCA..CCAG estExt_fgenesh1_pg.C_chr_100625 4 2 U2 GTAATGCA..CCAG AT2G24590.1 4 2 U2 GTAAAACT..GCAG AT4G31580.1 4 2 U2 GTAAATTT..TCAG Glyma08g39830.2 4 2 U2 GTATGTTT..ACAG Glyma08g39830.3 4 2 U2 GTATGTTT..ACAG Glyma08g39830.4 4 2 U2 GTATGTTT..ACAG Glyma18g18860.1 4 1 U2 CGTATGTT..ATCA CR936368_46.2 3 2 U2 GTTAGGTT..TCAG Glyma17g29080.2 4 2 U2 GTAGGTTT..GCAG Glyma17g29080.1 4 2 U2 GTAGGTTT..GCAG Glyma14g17930.3 4 2 U2 GTAGGTTT..GTAG Glyma14g17930.2 4 2 U2 GTAGGTTT..GCAG Glyma14g17930.1 4 2 U2 GTAGGTTT..GCAG gw1.XVIII.2163.1 3 2 U2 GTGAATTT..ACAG eugene3.01470005 4 2 U2 GTGAATTT..GCAG 10: 298-298 GSVIVP00028848001 5 2 U2 GTCATGGG..AGAG
Vv~GSVIVP00028848001 Pp~e_gw1.207.127.1 Pp~e_gw1.332.33.1 Os~LOC_Os06g08840.1 Os~LOC_Os06g08840.2 Os~LOC_Os06g08840.3 Os~LOC_Os06g08840.4 Os~LOC_Os06g08840.5 Os~LOC_Os06g08840.6 Os~LOC_Os06g08840.7 Os~LOC_Os06g08840.8 Zm~GRMZM2G151923_T01 Zm~GRMZM2G151923_T02 Zm~GRMZM2G151923_T03 Zm~GRMZM2G151923_T04 Sb~estExt_fgenesh1_pg.C_chr_100625 Os~LOC_Os02g39720.2 Os~LOC_Os02g39720.3 Os~LOC_Os02g39720.4 Os~LOC_Os02g39720.6 Zm~GRMZM2G027105_T01 Zm~GRMZM2G027105_T03 Zm~GRMZM2G027105_T04 Zm~GRMZM2G027105_T05 Zm~GRMZM2G027105_T07 Zm~GRMZM2G027105_T08 Zm~GRMZM2G027105_T06 At~AT1G23860.1 At~AT2G24590.1 At~AT4G31580.1 Pt~gw1.XIX.900.1 Lj~LjSGA_021019.1 Gm~Glyma08g39830.1 Gm~Glyma08g39830.2 Gm~Glyma08g39830.3 Gm~Glyma08g39830.4 Gm~Glyma18g18860.1 Mt~CR936368_46.2 Gm~Glyma17g29080.2 Gm~Glyma17g29080.1 Gm~Glyma14g17930.3 Gm~Glyma14g17930.2 Gm~Glyma14g17930.1 Gm~Glyma14g17930.4 Pt~gw1.XVIII.2163.1 Pt~eugene3.01470005	LMLE------------------------------ ---------------------------------- YVLLAVPFLYFYGVKWFYTHWWLLSLVILKPNYV ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ---------------------------------- ----------------------------------
		3' UTR introns