SRGD Gene ID 292 BLASTp at NCBI n/a n/a  
OrganismsOs ,Gm ,Sb ,At ,Lj ,Vv ,Mt ,Zm ,Pt
Gene count17
Cintron count10
Cintron classesU2 ,em ,im ,absent ,GC
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 ------------------------------------------------------------
----------------------------------------MRRYSPPHYSSPRRGHGGRG
------------------------------------------------------------
----------------------------------------MRRNSPGYYSPPRRGYGGRG
LGFKAGSRSTSQAKQVPFSPNSLLPRFNFRVSSVITQGLAMRRSSPGYYSPPRRGYGGRG
----------------------------------------MRRNSPAYYSPPRRGYGGGG
----------------------------------------MRRNSPAYYSPPRRGYGGGG
----------------------------------------MRRNSPAYYSPPRRGYGGGG
----------------------------------------MRRYSPPYYSPPRRGYGGRG
----------------------------------------MGRYSPAY-SPPRRGYGGRG
----------------------------------------MRRYSPPYRSPPRRAYGGRG
------------------------------------------------------------
----------------------------------------MRRYSPPYRSPPRRGYGGRG
----------------------------------------MRRYSPPYRSPPRRGYGGRG
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
2: 37-37
chr2.CM0405.110.nd 0 1 U2 GTACACCA..TTAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 ------------------------------------------------------------
RS---------PPRRGRGGGGGRYG----RSKDQDSGSLLVRNIPRDCRPEELRGMFERF
-------------------------------KDQNSGSLLVRNIPLDCRPDELRGPFERF
GG------GGGGGRRGYGGGGGGGG----RRRESNNGSLLVRNIPLDCRPEELRAPFERF
-----------PSRRGYGGGGGGGGGGGRRGREGNQGSLLVRNIPLDCRADEIRVPFERF
RGGGGGGGGGGSGRRGFGGGR----------RRDSNGSLLVRNIPLDCRPEELRVPFERF
RGGGGGGGGGGSGRRGFGGGR----------RRDSNGSLLVRNIPLDCRPEELRVPFERF
RG-------GGSGRRGFGGGR----------RRDSNGSLLVRNIPLDCRPEELRVPFERF
RS-----PPPPPPRRGYGGGGGGGG----R-RGSSHGSLLVRNIPLDCRPEELREPFERF
RS--------PPPRRGYGGGGGR--------GDHGSVSLLVRNIPLRCRPEELRVPFERF
RS-------PPPPRRGYGGR-----------NKEGSGSLLVRNIPLSVRAEELRVPFERF
------------------------------------------------------------
RS---------PPRRGYGGR-----------REQGSGSLLVRNIPLSCRGEDLRVPFERF
RS---------PPRRGYGGR-----------KEQGSGSLLVRNIPLSCRAEDLRVPFERF
-----------------------------------------------MVTWQTHTTHEHF
-----------------------------------------------MVTWQTHTTHEHF
------------------------------------------------------------
3: 107-107
grail3.0049021701 0 2 U2 GTGTTTGA..AAAG
gw1.X.2172.1 0 2 U2 GTATTTGA..CCAG
AT3G55460.1 1 2 U2 GTAAATTC..GTAG
Sb05g027700 1 2 U2 GTATGCAA..GCAG
fgenesh1_pg.C_scaffold_514000001 0 2 U2 GTACAGAA..TCAG
LOC_Os12g38430.1 1 2 U2 GTAGTGAA..GCAG
LOC_Os02g15310.1 1 2 U2 GTACTGGA..GCAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 ----------------------------------------------MNGQIFAGREISVV
GVVRDVYIP---------KDYHTGEPRGFGFVQFVEPSDAMEAQHHMNGQVFAGRQMFVV
GVVRDVYIP---------KDYYTGEPRGFAFVQFVDPYEAMEAQHRMNGQIFAGRQISVV
GPVRDVYIP---------KDYYSGQPRGFAFVQFVDAYEASEAQYHMDRQIFAGREISVV
GPVRDVYIP---------KDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREITVV
GPVRDVYIP---------KDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISVV
GPVRDVYIP---------KDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISVV
GPVRDVYIP---------KDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISVV
GPVRDVYIP---------RDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV
GPVRDVYLP---------RDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITVV
GPVRDVYIP---------KDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVV
----------------------------------------------MNRQVFFGREIAVV
GPVRDVYLP---------KDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVV
GPVRDVYLP---------KDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVV
APSYLLVLPSIFLKQLSHKIYIYREPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVV
APSYLLVLPSIFLKQLSHKIYIYREPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVV
----------------------------------------------MNRQVVFGREITVV
4: 142-143
grail3.0049021701 1 2 U2 GTGAGTTT..GCAG
gw1.X.2172.1 1 2 U2 GTGAGTTT..GCAG
CR962128_15.2 0 2 U2 GTGAGCTA..ACAG
chr2.CM0405.110.nd 1 2 U2 GTAAGCAA..ACAG
Glyma02g41510.1 0 2 U2 GTGAGTCA..ACAG
Glyma02g41510.2 1 2 U2 GTGAGTCA..ACAG
Glyma14g07440.1 1 2 U2 GTGAGTCA..ACAG
AT3G55460.1 2 2 U2 GTAAGCCT..GCAG
Sb05g027700 2 2 U2 GTAAGTGT..TCAG
fgenesh1_pg.C_scaffold_514000001 1 2 U2 GTAAGTTG..GCAG
LOC_Os12g38430.1 2 2 U2 GTAAGGCA..ACAG
LOC_Os02g15310.1 2 2 U2 GTAAAGTG..ACAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 VAAETRKRPEEMRTRA-RVRGPSS-YGGRRSSYYGGSRSRSVSRSRSPPRLL--------
VAAETRKRPEEMRHRT-RVRGPAD-HGG-RSSYSRRSRSR--SFSRSPRHYH--------
LAAETRKRPEEMRHRA-RVRGPSS-HGG-RSSNYGRSRSR--SLSRSPRHYP--------
VAAETRKRPEEMRHRTSRSRGPGGSYGGQRSSYHGMG---VLDLAQFPDQDHLLITLVLE
VASETRKRPEEMRHRT-RSSRPDN-YGGRRSSHHGRSRSRSITRSRSPPYHS--------
VAEETRKRPEEMRHRTSRLRGPAG-YGGQRSSRYGRSRSRSVTRSRSPPYHS--------
VAEETRKRPEEMRHRTSRLRGPAG-YGGQRSSRYGRSRSRSVTRSRSPPYHS--------
VAEETRKRPEEMRHRTSRFRGPAS-YGGRRSSHYGRSRSRSITRSRSPPYHS--------
VASESRKRPEEMRVKT-RTRSREP--SGSRDRSHGRSRSRSISRSRSPRRPS--------
LAADTRKRPEDMRRRT-GPRGYSG-HEGRRPYRHGRSRSRSYSRSRSPRP----------
LAAESRKRPEEMRSRA-RVRGYSG-HEGRRSSYYG-------------------------
LAAESRKRPEEMRSRT-RVRGYSG-HEGRRSSYYGRSRSR------SPRY----------
LAAESRKRPEEMRSRA-RVRGYSG-NEGRRSSYYGRSRSR----SRSPHY----------
LAAESRKRPEEMRSRA-RVRGYSD-HEGRRSSHYGRSRSR--SRSRSPRY----------
LAAESRKRPEEMRSRA-RVRGYSD-HEGRRSSHYGRSRSR--SRSRSPRY----------
LAAESRKRPEEMRSRA-RVRGYSD-HEGRRSSHYGRSRSR--SRSRSPRY----------
LAAESRKRPEEMRSRA-RVRGYSD-HEGRRSSHYGRSRSR--SRSRSPRY----------
5: 198-200
GSVIVP00018502001 0 2 U2 GTAATAAT..GCAG
grail3.0049021701 2 2 U2 GTAATCTC..ACAG
gw1.X.2172.1 2 2 U2 GTAATATC..ACAG
CR962128_15.2 1 2 U2 GTATGTCT..ACAG
chr2.CM0405.110.nd 2 2 U2 GTATTTAT..GCAG
Glyma02g41510.1 1 2 U2 GTATTTCT..ACAG
Glyma02g41510.2 2 2 U2 GTATTTCT..ACAG
Glyma14g07440.1 2 2 U2 GTATTTCT..ACAG
AT3G55460.1 3 2 U2 GTAAGTTT..TCAG
Sb05g027700 3 2 U2 GTATGCCA..GCAG
fgenesh1_pg.C_scaffold_514000001 2 2 U2 GTATGGTA..GCAG
GRMZM2G065066_T01 0 2 U2 GTATGATC..GCAG
LOC_Os12g38430.1 3 2 U2 GTACTTTA..GCAG
LOC_Os02g15310.1 3 2 U2 GTATTGTT..GCAG
LOC_Os02g15310.2 2 2 U2 GTATTGTT..GCAG
LOC_Os02g15310.3 3 2 U2 GTATTGTT..GCAG
LOC_Os02g15310.4 3 2 U2 GTATTGTT..GCAG
6: 213-213
GSVIVP00018502001 1 1 U2 GTAAAGAT..TCAG
grail3.0049021701 3 1 U2 GTATGTTA..TCAG
gw1.X.2172.1 3 1 U2 GTAAGACA..TTAG
CR962128_15.2 2 1 U2 GTAATATT..GTAG
Glyma02g41510.1 2 1 U2 GTAATGTC..TCAG
Glyma02g41510.2 3 1 U2 GTAATGTC..TCAG
Glyma14g07440.1 3 1 U2 GTAATGTC..TCAG
AT3G55460.1 4 1 U2 GTTAGTAA..TCAG
Sb05g027700 4 1 U2 GTAATCTA..GCAG
GRMZM2G065066_T01 1 1 U2 GTAATTTT..GTAG
LOC_Os12g38430.1 4 1 U2 GTATTTTT..ACAG
LOC_Os02g15310.1 4 1 U2 GTATTCTC..ACAG
LOC_Os02g15310.2 3 1 U2 GTATTCTC..ACAG
LOC_Os02g15310.3 4 1 U2 GTATTCTC..ACAG
LOC_Os02g15310.4 4 1 U2 GTATTCTC..ACAG
7: 214-215
CR962128_15.2 3 0 U2 GTATGTTG..TCAG
chr2.CM0405.110.nd 3 1 U2 GTAAATTC..TCAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 SGSRRYRSRSYSPVPRRRGDYSVSP-RRRVEHPRSPRDH--PP----ERDGDHIRRSYSP
VSRSRY--RSYSPAPQRR-DYSPSPERRYADHLRSPRGP--PP----ERDGGHNRRLYSP
SSRSRYRSRSYSPAPRRR-DYSASPDRRHAGHPGSPRGP--PP----ERDGDHSRRSYSP
TAIAQGKSRSFSPAPRRQGDYSVSP-RRHAERPRSPRSP--PRSPPVERDADHKRRSYSP
GSRSRYRSRSFSPAPRRRDDYSVSP-RRQAEHPRSPRSPRSPRSPSRERDGDHKRRSYSP
GSRNRYRSRSYSPAPRRQSDYSVSP-RRQAEHPRSPRGP--PR----ERDGEQKRRSYSP
GSRNRYRSRSYSPAPRRQSDYSVSP-RRQAEHPRSPRGP--PR----ERDGEQKRRSYSP
GSRNRYRSRSYSPAPRRQSDYSVSP-GRQAEHPRSPRGP--PR----EKDGDQKRRSYSP
DSRSRYRSRSYSPAPRRRGG----P----------PRG---------EEDENYSRRSYSP
--RGRGRSQSYSPAPKRRDDYSASPPRSKEENPRSS-KQ--PK----ENDRDKKRRSYTP
---NLAFVFSY-------HSWYCCP-----------------------------------
--RGRPRSRSYSPAPRRGNDYSASPRRQEAHRSSPPRRL--PK----EHDEDKKRRSYSP
--RGRPRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQ--PK----EHDEEKKRRSYSP
--RGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQ--PK----EHEVDKKRRSYSP
--RGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQ--PK----EHEVDKKRRSYSP
--RGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQ--PK----EHEVDKKRRSYSP
--RGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQ--PK----EHEVDKKRRSYSP
8: 245-248
GSVIVP00018502001 2 2 U2 GTACGCAG..TCAG
grail3.0049021701 4 2 U2 GTCGAGGT..GCAG
gw1.X.2172.1 4 2 U2 GTAAGCTT..GTAG
CR962128_15.2 4 2 U2 GTTTCTTC..CCAG
chr2.CM0405.110.nd 4 2 GC GCAAGTTT..CCAG
Glyma02g41510.1 3 2 GC GCATGTTT..CCAG
Glyma02g41510.2 4 2 GC GCATGTTT..CCAG
Glyma14g07440.1 4 2 GC GCAAGATT..CCAG
AT3G55460.1 5 2 U2 GTAACATG..ACAG
Sb05g027700 5 2 U2 GTATGTCT..CTAG
GRMZM2G065066_T01 2 2 U2 GTATGCTT..GCAG
LOC_Os12g38430.1 5 2 U2 GTAGATGA..AAAG
LOC_Os02g15310.1 5 2 U2 GTAGACCA..AAAG
LOC_Os02g15310.2 4 2 U2 GTAGACCA..AAAG
LOC_Os02g15310.3 5 2 U2 GTAGACCA..AAAG
LOC_Os02g15310.4 5 2 U2 GTAGACCA..AAAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 -GYDDAA----DQNHHTGNGYLEKSAYEPDEARDRRR---SPPPRRVSRSLSG--SRSRS
-HYGHGD----DLNKNN-NGFGEKLAYDF--VEARAW---RPSPGRPSSSPSG--SRTTS
-AYGHGD----GLNENG-NGFGEKSAYDF--EEARAW---RPSPGRASRSPSG--SRSRS
LGYGNDV----DQNQS--NGYAEKSVYKS--EADRGP---WKS----SRSPPGSRSRSRS
-PYDNGA----DQNQG--NGYTEKSVYKS--EADRGQ---LKSSRRESRSPLR--SRSRS
-AYGNGI----EQNQS--NGYAEKSMYKS--DADRGQ---WKS----SRSPPG--SRSRS
-AYGNGI----EQNQS--NGYAEKSMYKS--DADRGQ---WKS----SRSPPG--SRSRS
-AYGNGI----EQNQS--NGYAEKSMYKSEADADRSQ---WKS----SRSPPG--SRSRS
-GYEGAAAAAPDRDRNGDNEIREKPGYEA---EDR-----RRGGRAVSRSPSG--SRSRS
-DDRN-D----RRGAE--NGHDERKKSPAGEEDEKPHRGRRRSPRPASMSPPG--SRSRS
-SCTSVV---------------------------------WIL-----------------
-ASRDDA----D------NVY-EKRSPPADSDGSPLH---RRSPKEYSGSPPG--SRSRS
-ASRDGD----PRDAD--NGY-EKRSPPPDSDGSPPH---RRSPRHSSGSPPG--SRSRS
-ANKDGD----RRDAD--NGY-EKRSPPADSDGSPPH---RRSPRQSSGSPPG--SRSRS
-ANKDGD----RRDAD--NGY-EKRSPPADSDGSPPH---RRSPRQSSGSPPG--SRSRS
-ANKDGD----RRDAD--NGY-EKRSPPADSDGSPPH---RRSPRQSSGSPPG--SRSRS
-ANKDGD----RRDAD--NGY-EKRSPPADSDGSPPH---RRSPRQSSGSPPG--SRSRS
9: 321-322
GSVIVP00018502001 3 2 U2 GTAAGTTG..GCAG
grail3.0049021701 5 2 U2 GTAAGTGA..ATAG
gw1.X.2172.1 5 2 U2 GTAAGTGG..GTAG
CR962128_15.2 5 2 U2 GTGAGCCC..AAAG
chr2.CM0405.110.nd 5 2 U2 GTGAGTTC..AAAG
Glyma02g41510.1 4 2 U2 GTGAGTTC..AAAG
Glyma02g41510.2 5 2 U2 GTGAGTTC..AAAG
Glyma14g07440.1 5 2 U2 GTGAGTCA..AAAG
AT3G55460.1 6 2 U2 GTAAGTGA..ATAG
Sb05g027700 6 2 U2 GTAAGTTC..ACAG
GRMZM2G065066_T01 3 2 U2 GTAAGTTA..ATAG
LOC_Os12g38430.1 6 2 U2 GTAAGCAT..ACAG
LOC_Os02g15310.1 6 2 U2 GTAAGTTC..ACAG
LOC_Os02g15310.2 5 2 U2 GTAAGTTC..ACAG
LOC_Os02g15310.3 6 2 U2 GTAAGTTC..ACAG
LOC_Os02g15310.4 6 2 U2 GTAAGTTC..ACAG
Vv~GSVIVP00018502001
Pt~grail3.0049021701
Pt~gw1.X.2172.1
Mt~CR962128_15.2
Lj~chr2.CM0405.110.nd
Gm~Glyma02g41510.1
Gm~Glyma02g41510.2
Gm~Glyma14g07440.1
At~AT3G55460.1
Sb~Sb05g027700
Sb~fgenesh1_pg.C_scaffold_514000001
Zm~GRMZM2G065066_T01
Os~LOC_Os12g38430.1
Os~LOC_Os02g15310.1
Os~LOC_Os02g15310.2
Os~LOC_Os02g15310.3
Os~LOC_Os02g15310.4
 ADVSPRHSR
ADLSPRHAR
ADLSP----
VDLSPRRGR
ADLSPRHGR
AELSPRRGR
AELSPRRGR
AELSPRRGR
VEVSPR---
A--SPAISS
---------
ADDSPVASD
ADVSPARSD
ADGSPARSD
ADGSPARSD
ADGSPARSD
ADGSPARSD


3' UTR introns