SRGD Gene ID 261 BLASTp at NCBI n/a n/a  
OrganismsAt ,Lj ,Vv ,Os ,Mt ,Gm ,Zm ,Pp ,Sb ,Pt
Gene count17
Cintron count5
Cintron classesU2 ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 ---MAETLVLRGTLKGHANWVTAIACPLDNPDLILSSSRDKSIIVWHLSREEGN------
---MAETLVLRGTLKGHSNWVTAIACPLDNPDLILSSSRDKSIIVWTLTREEGN------
---MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA------
---MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKS------
---MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKS------
--MASDTLVLRGTMRAHTDQVTAIATPIDNSDMIVSSSRDKSIILWSLTKDEKT------
--MATETLILRGTMRAHTDQVTAIATPIDNTDMIVSASRDKSIILWHLTKDEKT------
---MAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILWHLTKDDKT------
---MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKT------
---MAEGLVLRGTMRAHTDQVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKT------
---MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKT------
---MADNLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKT------
MAGAQETLVLAGVMRGHNGVVTAIATPIDNSDLIVSSSRDKSLLVWDLRNPVQAAGDGTT
MAGAQESLVLAGVMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAG
MAGAQESLSLVGTMRGHNGEVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVHSTPESGA
MAGAQESLSLVGTMRGHNGEVTAIATPIDNSPFIVSSSRDKSVLVWDLTNPVHSTPESGV
MAGAQESLSLVGTMRAHNGEVTAIATPIDNSPFIVSASRDKSVLLWDLENPVHSTPESGV
2: 3-3
chr4.CM0042.2090.nc 0 0 U2 ..
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 ---YGVARRRLTGHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGHTKDV
---MAETLVLRGTLKGHSNWVTAIACPLDNPDLILSSSRDKSIIVWTLTREEGN------
---YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV
---YGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDV
---YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDV
---YGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGVSARRFVGHTKDV
---YGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGVSARRFVGHTKDV
---YGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDV
---YGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDV
---YGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDV
---YGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDV
---YGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDV
TADYGVPLRRLTGHSHFVQDVVLSSDGQFALSGSWDGDLRLWNLTTGETTCRFVGHEKDV
ASEYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDV
TADYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHEKDV
TADYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHEKDV
TADYGVPKRRLTGHSHFVQDVVLSSDGMFALSGSWDGELRLWDLSTGATTRRFVGHGKDI
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 LSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIQ---D-VDAHTGWVSCVRFSPVTANP
---YGVARRRLTGHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGHTKDV
LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS---EGGEGHRDWVSCVRFSPNTLQP
LSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTIS---E-ADGHKEWVSCVRFSPNTLVP
LSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTIS---E-GDGHKEWVSCVRFSPNTLVP
LSVAFSIDNRQIVSASRDKTIKLWNTLGECKYTIQ---E-AESHTDWVSCVRFSPNTLQP
LSVAFSFDNRQIVSASRDKTIKLWNTLGECKYTIQ---E-AESHTDWVSCVRFSPSTLQP
LSVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIQ---D-ADAHSDWVSCVRFSPNNLQP
LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ---D-GDAHSDWVSCVRFSPSTLQP
LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ---D-NDAHSDWVSCVRFSPSTLQP
LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ---D-GDAHSDWVSCVRFSPSTLQP
LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ---D-GDAHSDWVSCVRFSPSTLQP
LSVAFSADNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGAEGHNGWVSCVRFSPNTYQP
LSVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQP
LSVAFSVDNRQIVSASRDKTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQP
ISVAFSVDNRQIVSASRDKTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQP
LSVAFSVDNRQIISASRDKTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQP
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 IIVSGGWDKVVKVWNLTNCKIRTNLVGHTGYVNTVTVSPDGSLCASGGKDGVAMLWDLAE
---YGVARRRLTGHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGHTKDV
TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE
TIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDKTVKVWNLTNCKLRSTLAGHGGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDKTVKVWNLTNCKLRSTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDRTVKVWNLTNCKLRATLAGHGGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAE
TIVSGSWDRSVKVWNLTNCKLRCTLQGHGGYVNAVAVSPDGSLCASGGKDHVTLLWDLTE
TIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE
TIVSGSWDRTVKVWNLTNCKLRCTLDGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE
TIVSGSWDRTVKVWNLTNCKLRCTLDGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE
TIVSGSWDRTVKVWNLTNCKLRCTLDGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAE
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 GKRLYSLDAGDIIHSLCFSPNRYWLCAATQTCIKIWDLESKSVVDELRPEFTF-------
LSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIQ---D-VDAHTGWVSCVRFSPVTANP
GKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADN
GKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDG
GKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEG
GKRLYSLDAGAVINALCFSPNRYWLCAATENSIKIWDLESKLVVDDLKVDLKAEAEKSEG
GKKLYSLDAGAVINALCFSPNRYWLCAATENSIKIWDLESKMVVDDLKVDLKAEAEKSEG
GKRLYSLDAGAIIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKSEDTT-------
GKRLYSLDAGSIIHALCFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIG
GKRLYSLDAGSIIHALCFSPNRYWLCAATETSIKIWDLESKSIVEDLKVDLKTEADATT-
GKRLYSLDAGSIIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEADATSG
GKRLYSLDAGSIIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEADATTG
GKRLYALDAGDIIHSLCFSPNRYWLCAATQESIKIWDLESKHVVQDLKPEVSS-------
GKRLYSLDAGSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPV-------
GKRLYSLDAGSIIHSLCFSPNRYWLCAATQDSVKIWDLESKHVVQDLKPDIQI-------
GKRLYSLDAGSIIHSLCFSPNRYWLCAATQDSVKIWDLESKHVVQDLKPDIQV-------
GKRLYSLDAGSIIHSLCFSPNRYWLCAATQDSVKIWDLESKHVVQDLKPDIQI-------
3: 287-287
GSVIVP00017791001 0 0 U2 GTTGATCT..AAAG
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
 ----VSKKAQIPYCVSLNWSADGSTLFSGYTDGHIRVWAVGRA----
LSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIQ---D-VDGHTGWVSCVRFSPVTANP
S-GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGRY----
S-TGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGIGRY----
G-VGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGRY----
TTGTAASTTKKIYCTCLNWSADGSTLFSGYTDGVIRVWGIGRY----
TTATAVSTKKKIYCTSLNWSADGSTLFSGYTDGVIRVWGVGRY----
--TTAKKKGKIIYCTSLSWSADGSTLFSGYTDGVVRVWGIGRY----
--GDTTTKKKV------------------------------------
--GGNTNKKKVIYCTSLNWSADGSTLFSGYTDGVIRVWAIGRY----
--GGNANKKKVIYCTSLNWSADGSTLFSGYTDGVVRVWAIGRY----
--GGNPNKKKVIYCTSLNWSSDGSTLFSGYTDGVVRVWGIGRY----
------TKDQMLYCTCLSWSADGSTLYAGYTDGSIRIYKISAYGY--
------SKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKISGFSYAG
------SKNQILYCTSLSWSADGSTLYTGYTDGSIRVWKISGYGYAG
------SKNQILYCTSLSWSADGSTLYTGYTDGSIRVWKISGYGYAG
------SKNQILYCSSLSWSADGSTLYTGYTDGSIRVWKISAYGYAG
4: 309-310
AT1G18080.1 0 0 U2 GTACACAA..TCAG
eugene3.00150364 0 0 U2 GTAATACA..GTAG
estExt_fgenesh4_pm.C_LG_XII0164 0 0 U2 GTAAGGCA..GTAG
GSVIVP00017791001 1 0 U2 GTATATCT..CCAG
Glyma05g34070.1 0 0 U2 GTATATTC..GCAG
Glyma08g05610.1 0 0 U2 GTATATTT..GTAG
estExt_Genewise1Plus.C_chr_38217 0 0 U2 GTTAGTCT..GCAG
LOC_Os01g49290.1 0 0 U2 GTTTGTTT..GCAG
GRMZM2G038032_T01 0 0 U2 GTTTGTAC..ATAG
estExt_Genewise1.C_chr_97531 0 0 U2 GTTTGTCT..ATAG
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
IIVSGGWDKVVKVWNLTNCKIRSNLVGHTGYVNTVTVSPDGSLCASGGKDGVAMLWDLSE
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
IIVSGGWDKVVKVWNLTNCKIRTNLVGHTGYVNTVTVSPDGSLCASGGKDGVAMLWDLAE
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
GKRLYSLDAGDIIHSLCFSPNRYWLCAATQSCIKIWDLESKSIVDELRPEFTF-------
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
GKRLYSLDAGDIIHSLCFSPNRYWLCAATQSCIKIWDLESKSVVDELRPEFTF-------
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
----VSKKAQIPYCVSLNWSADGSTLFSGYTDGHIRVWAVGRA--------VSKKAQVPY
Pp~estExt_fgenesh1_pg.C_150112
Pp~estExt_Genewise1.C_2760003
At~AT1G18080.1
At~AT1G48630.1
At~AT3G18130.1
Pt~eugene3.00150364
Pt~estExt_fgenesh4_pm.C_LG_XII0164
Vv~GSVIVP00017791001
Mt~AC150743_39.2
Lj~chr4.CM0042.2090.nc
Gm~Glyma05g34070.1
Gm~Glyma08g05610.1
Sb~estExt_Genewise1Plus.C_chr_38217
Os~LOC_Os01g49290.1
Zm~GRMZM2G038032_T01
Zm~GRMZM2G040477_T01
Sb~estExt_Genewise1.C_chr_97531
CVSLNWSADGSTLFSGYTDGHIRVWAVGRA----


3' UTR introns