SRGD	Gene ID 25	BLASTp at NCBI	n/a	n/a		Organisms Gm ,Zm ,Sb ,Pp ,Os ,At ,Mt ,Vv ,Lj ,Pt Gene count 49 Cintron count 41 Cintron classes U2 ,GC ,em ,im ,absent
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		5' UTR introns
		Cluster Intron #: Alignment Start-Stop Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	-------------------------------MSGRFSRTIYVGNLPADIRESKVEDLFYK -------------------------------MSSRASRTIYVGNLPGDVREREIEDLFYK -------------------------------MSSRASRTIYVGNLPGDVREREIEDLFYK -------------------------------MSSRASRTIYVGNLPGDVREREIEDIFYK -------------------------------MSSRWNRTIYVGNLPGDIRKCEVEDLFYK ----------------------------MKTMSRRNSRTIYVGNLPGDIREREVEDLFYK ----------------------------MKTMSRRNSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRNSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRNSRTIYVGNLPGDIREREVEDLFYK ----------------------------MKTMSRRNSRTIYVGNLPGDIREREVEDLFYK MLSFLCDSEQNKHRLPFFAYLLAYTSLSGKKMSGRSSRTLYVGNLPGDIRLREVEDLFYK --------------------------------MSRASRTLYVGNLPGDIRLREVEDLFYK --------------------------------MSRASRTLYVGNLPGDIRVREVEDLFYK -------------------------------MSRRSSRTIYVGNLPGDIRLREVEDLFYK -------------------------------MSSRSSRTIYVGNLPGDIRLREVEDIFYK -------------------------------MSGRSSRTIYVGNLPGDVRLREVEDLFYK -------------------------------MSGRSSRTIYVGNLPGDVRLREVEDLFYK -------------------------------MSRRNSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRNSRTIYVGNLPGDIREREVEDLFYK -----------------------MMWIAEGRMSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSRRWSRTIYVGNLPGDIREREVEDLFYK -------------------------------MSSRSSRTVYVGNLPGDIREREVEDLFSK -------------------------------MSSRASRTLYVGNLPGDIREKEVEDLFYK -------------------------------MSSRASRTLYVGNLPGDIREREVEDLFYK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK -------------------------------MSRRSSRTVYVGNLPGDIREREVEDLFLK	2: 0-0 AC134522_50.2 0 0 U2 .. 3: 28-28 GRMZM2G331811_T01 0 0 U2 GTAATCGC..GCAG GRMZM2G331811_T03 0 0 U2 GTAATCGC..GCAG GRMZM2G331811_T02 0 0 U2 GTAATCGC..GCAG 4: 31-31 AT1G09140.1 0 0 U2 .. 5: 59-59 gw1.XII.145.1 0 0 U2 GTTTGTCT..GCAG estExt_Genewise1.C_280136 2 0 U2 GTACTGTA..GCAG e_gw1.7.233.1 0 0 U2 GTACTGGA..GCAG e_gw1.173.63.1 0 0 U2 GTAATGGA..GCAG GRMZM2G331811_T01 1 0 U2 GTGGATTG..GCAG GRMZM2G331811_T03 1 0 U2 GTGGATTG..GCAG GRMZM2G331811_T05 1 0 U2 GTGGATTG..GCAG GRMZM2G331811_T07 1 0 U2 GTGGATTG..GCAG GRMZM2G331811_T02 1 0 U2 GTGGATTG..GCAG fgenesh4_pg.C_LG_XIII000080 0 0 U2 GTATTGCA..GCAG fgenesh4_pm.C_scaffold_133000019 0 0 U2 GTTTTGCA..GCAG AC144541_44.2 0 0 U2 GTTCGTAT..GCAG chr5.CM0299.260.nc 0 0 U2 GTACTTGT..TCAG Glyma20g38060.1 0 0 U2 GTATGCAT..TCAG Glyma20g38060.2 1 0 U2 GTATGCAT..TCAG LOC_Os05g30140.1 1 0 U2 GTGAGCCA..GCAG LOC_Os05g30140.2 1 0 U2 GTGAGCCA..GCAG LOC_Os07g47630.2 0 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.1 1 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.3 1 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.4 1 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.6 1 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.7 1 0 U2 GTTGGTAG..GCAG LOC_Os07g47630.8 1 0 U2 GTTGGTAG..GCAG LOC_Os03g22380.3 1 0 U2 GTCGGTGA..ATAG LOC_Os03g22380.1 1 0 U2 GTCGGTGA..ATAG LOC_Os03g22380.2 1 0 U2 GTCGGTGA..ATAG GRMZM2G436092_T01 1 0 U2 GTGGGGAA..GCAG GRMZM2G436092_T02 1 0 U2 GTGGGGAA..GCAG estExt_fgenesh1_kg.C_chr_10401 1 0 U2 GTGGGGAA..GCAG AT1G02840.1 1 0 U2 GTAAAGGA..TCAG gw1.II.749.1 0 0 U2 GTAATATT..GCAG GSVIVP00027992001 0 0 U2 GTAATTTC..GCAG Glyma03g37240.2 1 0 U2 GTGCTTTG..GTAG Glyma03g37240.3 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.8 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.4 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.1 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.6 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.7 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.5 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.9 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.2 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.3 1 0 U2 GTGCTTTG..GTAG Glyma03g37240.1 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.10 1 0 U2 GTGCTTTG..GTAG Glyma19g39850.11 1 0 U2 GTGCTTTG..GTAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	YGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNFDGSRLRVELAHGG------ YGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGYNFDGNRLRVEIAHGG------ YGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVEIAHGG------ YGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGYNFDGNRLRVEIAHGG------ YGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAHGG------ YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGG------ YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGG------ YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGG------ YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGG------ YGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAHGG------ YGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAHGG------ YGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYNFDGCRLRVELAHGG------ YGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGYNFDACRLRVELAHGG------ FGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGYKFDGFRLRVELAHGG------ FGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGYDFDGFRLRVELAHGG------ YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRVELAHGG------ YGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRVELAHGG------ YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGG------ YGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGG------ YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGG------ YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGG------ YGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAHGG------ YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGG------ YGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGG------ YGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGYNFDGHRLRVEAAHGG------ YGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDD YGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGG------ YGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------ YGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVEPAHGG------	6: 81-81 gw1.XII.145.1 1 0 U2 GTAGTGCT..GCAG estExt_Genewise1.C_280136 3 0 U2 GTAATTCT..GCAG e_gw1.7.233.1 1 0 U2 GTAATGCT..GCAG e_gw1.173.63.1 1 0 U2 GTATTTTC..GTAG GRMZM2G331811_T01 2 0 U2 GTGAGGCT..ATAG GRMZM2G331811_T03 2 0 U2 GTGAGGCT..ATAG GRMZM2G331811_T05 2 0 U2 GTGAGGCT..ATAG GRMZM2G331811_T07 2 0 U2 GTGAGGCT..ATAG GRMZM2G331811_T02 2 0 U2 GTGAGGCT..ATAG fgenesh4_pg.C_LG_XIII000080 1 0 U2 GTGAGATT..ACAG fgenesh4_pm.C_scaffold_133000019 1 0 U2 GTGAGATT..ATAG AC144541_44.2 1 0 U2 GTGTGTCC..GCAG chr5.CM0299.260.nc 1 0 U2 GTATGTCT..GCAG Glyma20g38060.1 1 0 U2 GTATGTCT..GCAG Glyma20g38060.2 2 0 U2 GTATGTCT..GCAG LOC_Os05g30140.1 2 0 U2 GTAAGGGA..GCAG LOC_Os05g30140.2 2 0 U2 GTAAGGGA..GCAG LOC_Os07g47630.2 1 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.1 2 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.3 2 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.4 2 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.6 2 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.7 2 0 U2 GTAAGTTG..GAAG LOC_Os07g47630.8 2 0 U2 GTAAGTTG..GAAG LOC_Os03g22380.3 2 0 U2 GTAACATA..TTAG LOC_Os03g22380.1 2 0 U2 GTAACATA..TTAG LOC_Os03g22380.2 2 0 U2 GTAACATA..TTAG GRMZM2G436092_T01 2 0 U2 GTAAGATT..GCAG GRMZM2G436092_T02 2 0 U2 GTAAGATT..GCAG estExt_fgenesh1_kg.C_chr_10401 2 0 U2 GTAAGATT..GTAG AT1G02840.1 2 0 U2 GTCAGCTT..TTAG gw1.II.749.1 1 0 U2 GTGAGTTT..ACAG GSVIVP00027992001 1 0 U2 GTAAATTC..GTAG Glyma03g37240.2 2 0 U2 GTGAGTTT..GCAG Glyma03g37240.3 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.8 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.4 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.1 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.6 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.7 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.5 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.9 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.2 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.3 2 0 U2 GTGAGTTT..GCAG Glyma03g37240.1 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.10 2 0 U2 GTGAGTTT..GCAG Glyma19g39850.11 2 0 U2 GTGAGTTT..GCAG 7: 106-106 gw1.XII.145.1 2 0 U2 GTATTAAC..GCAG estExt_Genewise1.C_280136 4 0 U2 GTACGGTT..ACAG e_gw1.7.233.1 2 0 U2 GTGAGACT..TTAG e_gw1.173.63.1 2 0 U2 GTAAGGTC..ACAG GRMZM2G331811_T01 3 0 U2 GTATGTAT..TCAG GRMZM2G331811_T03 3 0 U2 GTATGTAT..TCAG GRMZM2G331811_T05 3 0 U2 GTATGTAT..TCAG GRMZM2G331811_T07 3 0 U2 GTATGTAT..TCAG GRMZM2G331811_T02 3 0 U2 GTATGTAT..TCAG fgenesh4_pg.C_LG_XIII000080 2 0 U2 GTAAGTAT..CTAG fgenesh4_pm.C_scaffold_133000019 2 0 U2 GTACGCCT..CTAG AC144541_44.2 2 0 U2 GTTAGTAC..GTAG chr5.CM0299.260.nc 2 0 U2 GTTAGTAC..GTAG Glyma20g38060.1 2 0 U2 GTTAGTAC..ATAG Glyma20g38060.2 3 0 U2 GTTAGTAC..ATAG LOC_Os05g30140.1 3 0 U2 GTAAGTGG..TTAG LOC_Os05g30140.2 3 0 U2 GTAAGTGG..TTAG LOC_Os07g47630.2 2 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.1 3 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.3 3 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.4 3 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.6 3 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.7 3 0 U2 GTAGGTGC..ACAG LOC_Os07g47630.8 3 0 U2 GTAGGTGC..ACAG LOC_Os03g22380.3 3 0 U2 GTAATGAC..GCAG LOC_Os03g22380.1 3 0 U2 GTAATGAC..GCAG LOC_Os03g22380.2 3 0 U2 GTAATGAC..GCAG GRMZM2G436092_T01 3 0 U2 GTAAGCTA..TCAG GRMZM2G436092_T02 3 0 U2 GTAAGCTA..TCAG estExt_fgenesh1_kg.C_chr_10401 3 0 U2 GTAAGCTA..TCAG AT1G02840.1 3 0 U2 GTTAGTTA..GTAG gw1.II.749.1 2 0 U2 GTTAGTTA..ATAG GSVIVP00027992001 2 0 U2 GTTGATTA..ATAG Glyma03g37240.2 3 0 U2 GTTGGTTA..ACAG Glyma03g37240.3 3 0 U2 GTTGGTTA..ACAG Glyma19g39850.8 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.4 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.1 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.6 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.7 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.5 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.9 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.2 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.3 3 0 U2 GTTGGTTA..ATAG Glyma03g37240.1 3 0 U2 GTTGGTTA..ACAG Glyma19g39850.10 3 0 U2 GTTGGTTA..ATAG Glyma19g39850.11 3 0 U2 GTTGGTTA..ATAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	-RGP--SSNDRRGGYGGGGGGGGGGGGGGGG----------GGGRLGISRHSEFRVIVRG -RGP-PPAVDRYSIY------------SSGGRGGGGSAADCGGRAGGVSRRSEYRVTVTG -RGPPPASVDRYSIY-----------SSGGGRGGGGSASENGGRAGGVSRRSEYRVTVTG -RGP-PPAVDRSAAE---------------S----------GGRAGGVSRRSEYRVMVTG -RRF-SPSVDRYSSS--------------YS----------ASR--APSRRSDYRVLVTG -RGQ-SYSYDRSSSY--------------SS----------ACRG-GVSRRSDFRVMVTG -RGQ-SYSYDRSSSY--------------SS----------ACRG-GVSRRSDFRVMVTG -RGQ-SYSYDRSSSY--------------SS----------ACRG-GVSRRSDFRVMVTG -RGQ-SYSYDRSSSY--------------SS----------ACRG-GVSRRSDFRVMVTG -RGQ-SYSYDRSSSY--------------SS----------ACRG-GVSRRSDFRVMVTG -RGS-SSSVDRYSRH-------------SGR----------SGSR-GVSRRSDYRVLVTG -RRH-SSPVDHYSSY------------SGSS----------GSR--GPSKRSDYRVLVTG -RRH-SSPVDRYSSY------------SGSS----------GSR--GPPKHSDYRVLVSG -RGY-SSSVDRYSSY--------------SS----------GSR--GVSKHSEYRVLVTG -RGS-SSSVDRYSSY------------SGGS----------SSR--GASRRSDYRVLVTG -RGY-SSSVDRYSSY------------SGGS----------GSR--GVSRRSDYRVLVTG -RGY-SSSVDRYSSY------------SGGS----------GSR--GVSRRSDYRVLVTG -RGP---SFDRSSSY--------------SS----------AGRR-GAAKRTDYRVMVTG -RGP---SFDRSSSY--------------SS----------AGRR-GAAKRTDYRVMVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGN-SSSFNNS-----------------GG----------GGRRGGVSRHTEYRVLVTG -RGNGGSSFDRPSNF--------------GG----------GGRR-GVSRHSEYRVLVTG -RGNGGSSFDRPSNF--------------GG----------GGRR-GVSRHSEYRVLVTG -RGNGGSSFDRPSNF--------------GG----------GGRR-GVSRHSEYRVLVTG -RGN-ASSHDRSSGF------------GGGG----------GARR-GVSRHSEYRVLVTG -RGN-ASSHDRSSGF------------GGGG----------GARR-GVSRHSEYRVLVTG -RGN-TSSYDRSSGF------------GGGG----------GGARRGVSRHSEYRVLVTG TRGS-FNGGGRGGGR------------GRGD----------GGSR-GPSRRSEFRVLVTG -RGH--SSSDRHSSY-------------SGG----------RGRG-GASRRSEYRVVVTG -RGH-SSSIDRH-SH------------SSGR----------GGRG-GASRRSEYRVLVTG -RGH-SSSRDRYNSH------------SNGR----------GGR--GVSRRSEYRVLVSG -RGH-SSSRDRYNSH------------SNGR----------GGR--GVSRRSEYRVLVSG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEY-LLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYR--VTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSRDRYNSH------------SNGR----------GGR--GVSRRSEYRVLVSG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG -RGH-SSSKDRHNSH------------SNGR----------GGR--GVSRRSEYRVLVTG	8: 129-129 e_gw1.173.63.1 3 1 U2 GTTACAGT..GGAG 9: 173-174 gw1.XII.145.1 3 1 U2 GTTTGTTT..GCAG estExt_Genewise1.C_280136 5 1 U2 GTATGATT..GCAG e_gw1.7.233.1 3 1 U2 GTTTGACT..GCAG e_gw1.173.63.1 4 1 U2 GTATTACA..GTAG GRMZM2G331811_T01 4 1 U2 GTTGGTAC..GCAG GRMZM2G331811_T03 4 1 U2 GTTGGTAC..GCAG GRMZM2G331811_T05 4 1 U2 GTTGGTAC..GCAG GRMZM2G331811_T07 4 1 U2 GTTGGTAC..GCAG GRMZM2G331811_T02 4 1 U2 GTTGGTAC..GCAG fgenesh4_pg.C_LG_XIII000080 3 1 U2 GTATGTTT..GCAG fgenesh4_pm.C_scaffold_133000019 3 1 U2 GTATGTTT..GCAG AC144541_44.2 3 1 U2 GTATATAC..GTAG chr5.CM0299.260.nc 3 1 U2 GTATGTAT..GTAG Glyma20g38060.1 3 1 U2 GTATGTAC..GCAG Glyma20g38060.2 4 1 U2 GTATGTAC..GCAG LOC_Os05g30140.1 4 1 U2 GTACGTAC..GCAG LOC_Os05g30140.2 4 1 U2 GTACGTAC..GCAG LOC_Os07g47630.2 3 1 U2 GTATGATA..ACAG LOC_Os07g47630.1 4 1 U2 GTATGATA..ACAG LOC_Os07g47630.3 4 1 U2 GTATGATA..ACAG LOC_Os07g47630.4 4 1 U2 GTATGATA..ACAG LOC_Os07g47630.6 4 1 U2 GTATGATA..ACAG LOC_Os07g47630.7 4 1 U2 GTATGATA..ACAG LOC_Os07g47630.8 4 1 U2 GTATGATA..ACAG LOC_Os03g22380.3 4 1 U2 GTATGACT..ACAG LOC_Os03g22380.1 4 1 U2 GTATGACT..ACAG LOC_Os03g22380.2 4 1 U2 GTATGACT..ACAG GRMZM2G436092_T01 4 1 U2 GTATGGTT..ACAG GRMZM2G436092_T02 4 1 U2 GTATGGTT..ACAG estExt_fgenesh1_kg.C_chr_10401 4 1 U2 GTATGGTT..ACAG AT1G02840.1 4 1 U2 GTATGTAG..ACAG gw1.II.749.1 3 1 U2 GTGTGTAG..GCAG GSVIVP00027992001 3 1 U2 GTATGGAT..GCAG Glyma03g37240.2 4 1 U2 GTGTGTAG..GCAG Glyma03g37240.3 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.8 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.4 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.1 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.6 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.7 4 1 U2 GTGGTGTG..GCAG Glyma19g39850.5 4 1 U2 GTGTGTAG..CTAG Glyma19g39850.9 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.2 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.3 4 1 U2 GTGTGTAG..GCAG Glyma03g37240.1 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.10 4 1 U2 GTGTGTAG..GCAG Glyma19g39850.11 4 1 U2 GTGTGTAG..GCAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	LPSSASWQDLKDHMRKAGDVCFAEVTRDG-DGTLGLVDYTNHEDMKYAIRKLDDTEFKNP LPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTNYDDMKYAIRKLDDSEFRNP LPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFTNYDDMKYAIRKLDDSEFRNP LPSSASWQDLKDHMRRAGDVCFAQVFRDA--GTMGIVDFTNYDDMKYAIRKLDDSEFRNP LPPSASWQDLKDHMRKAGDVCFSEVFPDR-KGMSGVVDYSNYDDMKYAIRKLDATEFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREA-GETIGIVDYTNYDDMKYAIRKLDDSQFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREA-GETIGIVDYTNYDDMKYAIRKLDDSQFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREA-GETIGIVDYTNYDDMKYAIRKLDDSQFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREA-GETIGIVDYTNYDDMKYAIRKLDDSQFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREA-GETIGIVDYTNYDDMKYAIRKLDDSQFRNA LPPSASWQDLKDHMRKAGHVCFSQVFRER-GGLTGIVDYTNYDDVKYAIRKLDDSEFRNA LPSSASWQDLKDHMRRAGDVCFSQVFRDR-GGMTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRRAGDVCFSQVFRDR-GGMTGIVDYTNYDDMKYAIKKLDDSEFRNA LPPSASWQDLKDHMRRAGDVCFSQVFRDR-GGMTGIVEYTNYEDMKYAIRKLDDSEFRNA LPPSASWQDLKDHMRKAGDVCFSQVFRER-GGMTGIVDYTNYDDMKYALRKLDDSEFRNA LPPSASWQDLKDHMRKAGDVCFSQVFRER-GGMTGIVDYTNYDDMKYAIRKLDDSEFRNA LPPSASWQDLKDHMRKAGDVCFSQVFRER-GGMTGIVDYTNYDDMKYAIRKLDDSEFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREG-GATIGIVDYTNYEDMKQAIRKLDDSEFRNA LPSSASWQDLKDHMRRAGDVCFSDVYREG-GATIGIVDYTNYEDMKQAIRKLDDSEFRNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRNAGDVCYSEVYREG-GGTIGIVDYTNYDDMKYAIRKLDDSEFKNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDTEFRNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDTEFRNA LPSSASWQDLKDHMRKAGDVCFSEVYREG-GGTVGIVDYTNYDDMKYAIKKLDDTEFRNA LPSSASWQDLKDHMRKGGDVCFSQVYRDA-RGTTGVVDYTCYEDMKYALKKLDDTEFRNA LPSSASWQDLKDHMRRAGDVCFSQVFRDG-SGTTGIVDYTNYEDMKYAIKKIDDSEFRNA LPSSASWQDLKDHMRRAGDVCFSQVFHDG-GGTVGIVDYTNYDDMKFAIRKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA LPSSASWQDLKDHMRKAGDVCFSQVFHDG-RGTTGIVDYTNYDDMKYAIKKLDDSEFRNA	10: 190-190 gw1.XII.145.1 4 0 U2 GTTGGAGA..TCAG estExt_Genewise1.C_280136 6 0 U2 GTATGCAC..ACAG e_gw1.7.233.1 4 0 U2 GTAAACAT..ATAG e_gw1.173.63.1 5 0 U2 GTATGGAT..GCAG GRMZM2G331811_T01 5 0 U2 GTAATTTC..TCAG GRMZM2G331811_T03 5 0 U2 GTAATTTC..TCAG GRMZM2G331811_T05 5 0 U2 GTAATTTC..TCAG GRMZM2G331811_T07 5 0 U2 GTAATTTC..TCAG GRMZM2G331811_T02 5 0 U2 GTAATTTC..TCAG fgenesh4_pg.C_LG_XIII000080 4 0 U2 GTATGCTC..TCAG fgenesh4_pm.C_scaffold_133000019 4 0 U2 GTATACCG..TCAG AC144541_44.2 4 0 U2 GTATGACT..TTAG chr5.CM0299.260.nc 4 0 U2 GTATGGAT..CTAG Glyma20g38060.1 4 0 U2 GTATGGCT..TTAG Glyma20g38060.2 5 0 U2 GTATGGCT..TTAG LOC_Os05g30140.1 5 0 U2 GTATTGAT..TCAG LOC_Os05g30140.2 5 0 U2 GTATTGAT..TCAG LOC_Os07g47630.2 4 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.1 5 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.3 5 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.4 5 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.6 5 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.7 5 0 U2 GTCTGCTA..TCAG LOC_Os07g47630.8 5 0 U2 GTCTGCTA..TCAG LOC_Os03g22380.3 5 0 U2 GTTTGTTG..TCAG LOC_Os03g22380.1 5 0 U2 GTTTGTTG..TCAG LOC_Os03g22380.2 5 0 U2 GTTTGTTG..TCAG GRMZM2G436092_T01 5 0 U2 GTCTGTGT..CCAG GRMZM2G436092_T02 5 0 U2 GTCTGTGT..CCAG estExt_fgenesh1_kg.C_chr_10401 5 0 U2 GTCTGTGT..CTAG AT1G02840.1 5 0 U2 GTGACTTC..TTAG gw1.II.749.1 4 0 U2 GTGGGTCC..TTAG GSVIVP00027992001 4 0 U2 GTAACTAT..TTAG Glyma03g37240.2 5 0 U2 GTGAGTTG..GCAG Glyma03g37240.3 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.8 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.4 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.1 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.6 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.7 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.5 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.9 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.2 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.3 5 0 U2 GTGAGTTG..GCAG Glyma03g37240.1 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.10 5 0 U2 GTGAGTTG..GCAG Glyma19g39850.11 5 0 U2 GTGAGTTG..GCAG 11: 207-210 gw1.XII.145.1 5 1 U2 GTATGCCT..TCAG e_gw1.173.63.1 6 1 U2 GTTCTGGT..GCAG GRMZM2G331811_T01 6 1 U2 GTTAGTTG..GCAG GRMZM2G331811_T03 6 1 U2 GTTAGTTG..GCAG GRMZM2G331811_T05 6 1 U2 GTTAGTTG..GCAG GRMZM2G331811_T07 6 1 U2 GTTAGTTG..GCAG GRMZM2G331811_T02 6 1 U2 GTTAGTTG..GCAG fgenesh4_pg.C_LG_XIII000080 5 1 U2 GTAAGTGA..GCAG fgenesh4_pm.C_scaffold_133000019 5 1 U2 GTAAGTAA..GCAG AC144541_44.2 5 1 U2 GTAAGTAG..GCAG chr5.CM0299.260.nc 5 1 U2 GTAAGTGG..GTAG Glyma20g38060.1 5 1 U2 GTAAGTGG..GCAG Glyma20g38060.2 6 1 U2 GTAAGTGG..GCAG LOC_Os05g30140.1 6 1 U2 GTTAGTAC..TCAG LOC_Os05g30140.2 6 1 U2 GTTAGTAC..TCAG LOC_Os07g47630.2 5 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.1 6 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.3 6 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.4 6 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.6 6 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.7 6 1 U2 GTAAGTCT..ACAG LOC_Os07g47630.8 6 1 U2 GTAAGTCT..ACAG LOC_Os03g22380.3 6 1 U2 GTAATACA..GCAG LOC_Os03g22380.1 6 1 U2 GTAATACA..GCAG LOC_Os03g22380.2 6 1 U2 GTAATACA..GCAG GRMZM2G436092_T01 6 1 U2 GTAAGTAG..ACAG GRMZM2G436092_T02 6 1 U2 GTAAGTAG..ACAG estExt_fgenesh1_kg.C_chr_10401 6 1 U2 GTAAGTAG..ACAG AT1G02840.1 6 1 U2 GTAATAAG..GTAG gw1.II.749.1 5 1 U2 GTAAGATA..TTAG GSVIVP00027992001 5 1 U2 GTAAGATA..GTAG Glyma03g37240.2 6 1 U2 GTACGGAA..GCAG Glyma03g37240.3 6 1 U2 GTACGGAA..GCAG Glyma19g39850.8 6 1 U2 GTACAGAA..GCAG Glyma19g39850.4 6 1 U2 GTACAGAA..GCAG Glyma19g39850.1 6 1 U2 GTACAGAA..GCAG Glyma19g39850.6 6 1 U2 GTACAGAA..GCAG Glyma19g39850.7 6 1 U2 GTACAGAA..GCAG Glyma19g39850.5 6 1 U2 GTACAGAA..GCAG Glyma19g39850.9 6 1 U2 GTACAGAA..GCAG Glyma19g39850.2 6 1 U2 GTACAGAA..GCAG Glyma19g39850.3 6 1 U2 GTACAGAA..GCAG Glyma03g37240.1 6 1 U2 GTACGGAA..GCAG Glyma19g39850.10 6 1 U2 GTACAGAA..GCAG Glyma19g39850.11 6 1 U2 GTACAGAA..GCAG 12: 227-227 gw1.XII.145.1 6 0 U2 GTGAGTTG..TCAG estExt_Genewise1.C_280136 7 0 U2 GTAAGTTT..GCAG e_gw1.7.233.1 5 0 U2 GTAAGTAT..GCAG e_gw1.173.63.1 7 0 U2 GTAAGTAT..GTAG GRMZM2G331811_T01 7 0 U2 GTGGGTTT..GTAG GRMZM2G331811_T03 7 0 U2 GTGGGTTT..GTAG GRMZM2G331811_T05 7 0 U2 GTGGGTTT..GTAG GRMZM2G331811_T07 7 0 U2 GTGGGTTT..GTAG GRMZM2G331811_T02 7 0 U2 GTGGGTTT..GTAG fgenesh4_pg.C_LG_XIII000080 6 0 U2 GTAAGTTG..GTAG fgenesh4_pm.C_scaffold_133000019 6 0 U2 GTAAGTTA..GTAG AC144541_44.2 6 0 U2 GTAAGTTT..ACAG chr5.CM0299.260.nc 6 0 U2 GTAAGTAT..ACAG Glyma20g38060.1 6 0 U2 GTAAGTGT..ACAG Glyma20g38060.2 7 0 U2 GTAAGTGT..ACAG LOC_Os05g30140.1 7 0 U2 GTAAGTTT..ACAG LOC_Os05g30140.2 7 0 U2 GTAAGTTT..ACAG LOC_Os07g47630.2 6 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.1 7 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.3 7 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.4 7 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.6 7 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.7 7 0 U2 GTAAGTAT..GCAG LOC_Os07g47630.8 7 0 U2 GTAAGTAT..GCAG LOC_Os03g22380.3 7 0 U2 GTAAGCTT..GCAG LOC_Os03g22380.1 7 0 U2 GTAAGCTT..GCAG LOC_Os03g22380.2 7 0 U2 GTAAGCTT..GCAG GRMZM2G436092_T01 7 0 U2 GTAAGTCC..GCAG GRMZM2G436092_T02 7 0 U2 GTAAGTCC..GCAG estExt_fgenesh1_kg.C_chr_10401 7 0 U2 GTAAGTCC..GCAG AT1G02840.1 7 0 U2 GTAAGCTA..CCAG gw1.II.749.1 6 0 U2 GTTAGTTA..GCAG GSVIVP00027992001 6 0 U2 GTGAGTTA..GCAG Glyma03g37240.2 7 0 U2 GTGAGTTA..GCAG Glyma03g37240.3 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.8 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.4 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.1 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.6 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.7 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.5 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.9 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.2 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.3 7 0 U2 GTGAGTTA..GCAG Glyma03g37240.1 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.10 7 0 U2 GTGAGTTA..GCAG Glyma19g39850.11 7 0 U2 GTGAGTTA..GCAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	WARAYIRVKQYEG------SPSRSRSRGRSRSRSRSRSRSPRRNRRCLSV---------- FSRSFIRVGDLSF------AYICVKSPRNRSPRSRSRSP--------------------- FSRSFIRVCLCVT---KSRSRSRRYTIGFSVGYSRSKSPRSRSRSPRSRSPRSA------ FSRSFIRV-SYGS--RRSVTRSRSP---RSRSRSRSKTPRS------------------- FSSAYIRVREYES-RSVSRSPDDSKSY---RSRSRSRGPSCSYSSKSRSV---------- FSRAYIRVREYDA---RSRSRSRSHSYSRSPSYSRSRSPKSVS----------------- FSRAYIRVREYDA---RSRSRSRSHSYSRSPSYSRSRSPKSVSQSPSSVDER-------- FSRAYIRVREYDA---RSRSRSRSHSYSRSPSYSRSRSPKSVSQSPSSVDER-------- FSRAYIRVREYDA---RSRSRSRSHSYSRSPSYSRSRSPKSVSQSPSSVDER-------- FSRAYIRVREYDA---RSRSRSRSHSYSRSPSYSRSRSPKSVSQSPSSVDER-------- FSRSYIRVREYD------RSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLS---------- FSRAYIRVREYDS----RRSYSRSPSLSSYVSRSRSRSRS-------------------- FSRAYIRVREYDS----RRSYSRSPSCSSHVSRSRSRSHS-------------------- FSWAYIRVREYDR-----RRYTRSPSCDTRRSYSRSPSRSPYMSRSRNRSQS-------- FSRAYIRVREYD------RDYSRSPSRDSRRSYSRSISRSPYLSRSRSRS---------- FSRAFIRVREYD------RGYSRSPSRDSRRSYSRSLSRSPCISRSRSHSRSRSHSYSDR FSRAFIRVREYD------RGYSRSPSRDSRRSYSRSLSRSPCISRSR------------- FSRAYIRVREYDS-AKRSRSRSRGRSHSRSISRSRSRSRSISRSRSRSYSRS-------- FSRAYIRVREYDS-AKRSRSRSRGRSHSRSISRSRSRSRSISRSRSRSYSRS-------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKAYIRVKEYDG--KRSRSYSRSRSRSRGRSYSRSRSPS-------------------- FSKGHIRVKEYDG--KRARSYSRSRSPSRSRSKSRSL----------------------- FSKGHIRVKEYDG--KRARSYSRSRSPSRSRSKSRSLS---------------------- FSKGHIRVKEYDG--KRARSYSRSRSPSRSRSKSRSLS---------------------- FGRAYIRVKEYNG--KRGRSYSRSRSPS--RSYSKSRSPS-------------------- FGRAYIRVKEYNG--KRGRSYSRSRSPS--RSYSKSRSPS-------------------- FGRAYIRVKEYDG--KRGRSYSRSRSPS--RSYSKSRSPS-------------------- FSNGYVRVREYDS-RKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRS---------- FSQAYVRVREYDSKRDSSRSPGRDRSHSRGRNDSRSRSLSRSRSRRFRSS---------- FSRAYVRVKEYDS--SRSFSRSRSRSYSRGKSASRSRSRSYSRSRSQS------------ FSKGYVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQS---------- FSKGYVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQS---------- FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQS---------- FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR FSKGYVRVREYDSRRDSSRSPSHGPSHSRGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQR	13: 246-249 gw1.XII.145.1 7 0 U2 GTAACCAT..AAAG e_gw1.7.233.1 6 2 U2 GTCTTATT..GGAG e_gw1.173.63.1 8 1 U2 GTGGTCTA..AAAG GRMZM2G331811_T01 8 0 U2 GTATGTAT..ATAG GRMZM2G331811_T03 8 0 U2 GTATGTAT..ATAG GRMZM2G331811_T05 8 0 U2 GTATGTAT..ATAG GRMZM2G331811_T07 8 0 U2 GTATGTAT..ATAG GRMZM2G331811_T02 8 0 U2 GTATGTAT..ATAG fgenesh4_pg.C_LG_XIII000080 7 0 U2 GTATGTCA..CTAG fgenesh4_pm.C_scaffold_133000019 7 0 U2 GTATGTCA..CTAG AC144541_44.2 7 0 U2 GTGTGTGA..TCAG chr5.CM0299.260.nc 7 0 U2 GTGAGTGA..CCAG Glyma20g38060.1 7 0 U2 GTGGGTGG..CCAG Glyma20g38060.2 8 0 U2 GTGGGTGG..CCAG LOC_Os05g30140.1 8 0 U2 GTATGGTC..AAAG LOC_Os05g30140.2 8 0 U2 GTATGGTC..AAAG LOC_Os07g47630.2 7 0 U2 GTACACAC..TTAG LOC_Os07g47630.1 8 0 U2 GTACACAC..TTAG LOC_Os07g47630.3 8 0 U2 GTACACAC..TTAG LOC_Os07g47630.4 8 0 U2 GTACACAC..TTAG LOC_Os07g47630.6 8 0 U2 GTACACAC..TTAG LOC_Os07g47630.7 8 0 U2 GTACACAC..TTAG LOC_Os07g47630.8 8 0 U2 GTACACAC..TTAG LOC_Os03g22380.3 8 0 U2 GTAAACTG..ATAG LOC_Os03g22380.1 8 0 U2 GTAAACTG..ATAG LOC_Os03g22380.2 8 0 U2 GTAAACTG..ATAG GRMZM2G436092_T01 8 0 U2 GTAAGCAT..ACAG GRMZM2G436092_T02 8 0 U2 GTAAGCAT..ACAG estExt_fgenesh1_kg.C_chr_10401 8 0 U2 GTAAGCAT..ACAG AT1G02840.1 8 0 U2 GTTAGTTG..TTAG gw1.II.749.1 7 0 U2 GTAGGTTT..GTAG GSVIVP00027992001 7 0 U2 GTATGATT..ACAG Glyma03g37240.2 8 0 U2 GTATGTCA..TTAG Glyma03g37240.3 8 0 U2 GTATGTCA..TTAG Glyma19g39850.8 8 0 U2 GTATGTCA..TTAG Glyma19g39850.4 8 0 U2 GTATGTCA..TTAG Glyma19g39850.1 8 0 U2 GTATGTCA..TTAG Glyma19g39850.6 8 0 U2 GTATGTCA..TTAG Glyma19g39850.7 8 0 U2 GTATGTCA..TTAG Glyma19g39850.5 8 0 U2 GTATGTCA..TTAG Glyma19g39850.9 8 0 U2 GTATGTCA..TTAG Glyma19g39850.2 8 0 U2 GTATGTCA..TTAG Glyma19g39850.3 8 0 U2 GTATGTCA..TTAG Glyma03g37240.1 8 0 U2 GTATGTCA..TTAG Glyma19g39850.10 8 0 U2 GTATGTCA..TTAG Glyma19g39850.11 8 0 U2 GTATGTCA..TTAG 14: 262-262 estExt_Genewise1.C_280136 8 2 U2 GTTCTTTG..GCAG 15: 270-270 e_gw1.7.233.1 7 2 U2 GTTATTGC..GCAG e_gw1.173.63.1 9 2 U2 GTATTGTA..ACAG 16: 276-278 GRMZM2G331811_T01 9 2 U2 GTATGTAT..TTAG GRMZM2G331811_T03 9 2 U2 GTATGTAT..TTAG GRMZM2G331811_T05 9 2 U2 GTATGTAT..TTAG GRMZM2G331811_T07 9 2 U2 GTATGTAT..TTAG GRMZM2G331811_T02 9 2 U2 GTATGTAT..TTAG LOC_Os07g47630.2 8 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.1 9 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.3 9 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.4 9 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.6 9 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.7 9 2 U2 GTCTGGTG..GCAG LOC_Os07g47630.8 9 2 U2 GTCTGGTG..GCAG LOC_Os03g22380.1 9 2 U2 GTCTTTTT..GCAG LOC_Os03g22380.2 9 2 U2 GTCTTTTT..GCAG GRMZM2G436092_T01 9 2 U2 GTATGCTG..GCAG GRMZM2G436092_T02 9 2 U2 GTATGCTG..GCAG estExt_fgenesh1_kg.C_chr_10401 9 2 U2 GTATGCTG..GCAG 17: 286-290 gw1.XII.145.1 8 0 U2 GTGTGTGT..ATAG GRMZM2G331811_T03 10 2 U2 GTATGTGA..GCAG GRMZM2G331811_T05 10 2 U2 GTATGTGA..GCAG GRMZM2G331811_T07 10 2 U2 GTATGTGA..GCAG GRMZM2G331811_T02 10 2 U2 GTATGTGA..GCAG gw1.II.749.1 8 0 U2 GTTTGCAT..GAAG GSVIVP00027992001 8 2 U2 GTTATATT..GCAG Glyma03g37240.2 9 2 U2 GTCTATGC..GCAG Glyma03g37240.3 9 2 U2 GTCTATGC..GCAG Glyma19g39850.8 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.4 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.1 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.6 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.7 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.5 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.9 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.2 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.3 9 2 U2 GTCTTTGC..GCAG Glyma03g37240.1 9 2 U2 GTCTATGC..GCAG Glyma19g39850.10 9 2 U2 GTCTTTGC..GCAG Glyma19g39850.11 9 2 U2 GTCTTTGC..GCAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	-----LCSKSLERSV-SRS-RSRS----RSRS---KTRS-ASPLKSSRPKSRSRSR---- ---RSPTPLSARSR--SRS-RSRS-G-SRSRS---RSRS-RSPSR---SRSRSRS----- ---TPASARSRSRSP-SRS-RSRSLSRSRSRS---RSRSVRSASK--------------- ---RSPRSRS--RSP-----RSATPA-SRSRS---RSRSVRSPSK--------------- ---SPARSISPRSRPLSRSRSLYSSV-SRSQS---RSKS-RSRSR-------SNSPVSPV ---QSPSSVDERYVNLCHL-EMYICE-TESAN---IVRR-NPIVK--------------- ---SLSRSRSPISSP-SHA-RYAT-S-PRSRS---ASRS-RSPVI--ASFQNNHLLCC-- ---SLSRSRSPISSP-SHA-RYAT-S-PRSRS---ASRS-RSPVRSD------------- ---SLSRSRSPISSP-SHA-RYAT-S-PRSRS---ASRS-RSPVRSD------------- ---SLSRSRSPISSP-SHA-RYAT-S-PRSRS---ASRS-RSPVRSD------------- ---HSYSGRSRRFTL-VASVKFDLFV-SKSKT---LSAL-IFPFK----PFAATWELHVR -------------------------G-GYSDR---SWRS-ALP----------------- --------------------HGRSYS-DRSRR--------STPP---------------- ---YSYSSKSSRSLS-PKVKRTRRSL-SRSRA---KYTT--------------------- ---RSYSGRSISLSP-TAK-RSRRLL-SLSRCGLLRGSG-NCMLGS-------------- SRSWSPKPKHSRRSI-SLS-RSQS----RSRS---PNSS-PRPHQ--------------- ---SHSRSRSHSYSD-----RSRSWS-PKPKH---SRRS-ISLSRSVSTKSDTYAVLCSV ---RSPRSRSASRSH-SPV-KERSRSASQSRS---PVKE-RSPSR--------------S ---RSPRSRSASRSH-SPV------K-ERSRS---ASQS-RSPVKERFGTCSYLGCVGRI ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR---SPARSQSPNTSP ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- ---KSPKGKSSRRSA-SRS-RSRSAS-SRSRS---ESKG-RSPSR--------------- -----------------RS-FYHILI-SVGKT---VDDL-THIEYAVQ------------ ---KSPRTRRSASR--SRS-RSRSVS-SRSRS---ASKG-RSPSR---SPARSKSPNASP ---KSPRTRRSASR--SRS-RSRSVS-SRSRS---ASKG-RSPSR--------------- ---KSPR---TRRSS-SRS-RSRSVS-SRSRS---PSKG-RSPSR--------------- ---KSPR---TRRSS-SRS-RSRSVS-SRSRS---PSKG-RSPSR--------------- ---KSPK---TRRSS-SRS-RSRSVS-SRSRS---ASKG-RSPSR---SPARSKSPNASP ---RSPKAKSSRRSP-AKS-TSRSPG-PRSKS-----RS-PSPRR---SRSRSRSPLPSV ---KSPKKPSVSRSP-SRS------R-SRSRS---KSLS-RS------------------ ---KSPKAKSSRRS------RSRSVS-SRSHS---GSKP-RSLSG---SRSRSRSPLPTR ---KSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-LSGSR-----SRSRSPLPPR ---KSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-LSGSR-----SRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSRSP--------------- SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSGYEISRSRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPR SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPC SPAKSPKGKSSQRSP-AKS-PSRSPSRSRSRS---RSRS-RSPLP--------------- SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSG---SRSRSRSPLPPR ---KSPKGKSSQRSP-AKS-PSRS----PSRS---RSRS-RSLSGYGNLQRTGNWKLGSW SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSGYGNLQHTGNWKLGSW SPAKSPKGKSSQRSP-AKS-PSRS-P-SRSRS---RSRS-RSLSGYGNLQHTGNWKLGSW	18: 301-301 Glyma20g38060.1 8 2 U2 GTTCACTT..GCAG 19: 305-305 LOC_Os05g30140.1 9 2 U2 GTATGGTT..CCAG LOC_Os05g30140.2 9 2 U2 GTATGGTT..CCAG 20: 310-313 GRMZM2G331811_T03 11 0 U2 GTAAGTAT..GCAG GRMZM2G331811_T05 11 0 U2 GTAAGTAT..GCAG GRMZM2G331811_T07 11 0 U2 GTAAGTAT..GCAG GRMZM2G331811_T02 11 0 U2 GTAAGTAT..GCAG AC144541_44.2 8 2 U2 GTTCACTA..GCAG chr5.CM0299.260.nc 8 2 U2 GTTCAATT..GCAG 21: 318-322 Glyma20g38060.1 9 2 U2 GTCAGTTT..GCAG Glyma20g38060.2 9 2 U2 GTTCACTT..GCAG LOC_Os05g30140.1 10 2 U2 GTATGCAC..CCAG 22: 327-331 AC144541_44.2 9 2 U2 GTCAGTTT..AAAG chr5.CM0299.260.nc 9 2 U2 GTCAGTTT..TTAG LOC_Os05g30140.2 10 2 U2 GTATGCAC..CCAG Glyma19g39850.4 10 2 U2 GTCAAGGT..GCAG Glyma19g39850.2 10 2 U2 GTCAAGGT..GCAG 23: 338-346 gw1.XII.145.1 9 2 U2 GTAATTAG..GCAG GRMZM2G331811_T05 12 0 U2 GTAATTGC..TCAG GRMZM2G331811_T07 12 0 U2 GTAATTGC..TCAG GRMZM2G331811_T02 12 0 U2 GTAATTGC..TCAG Glyma20g38060.1 10 0 U2 GTAAGTGT..GCAG LOC_Os05g30140.1 11 2 U2 GTATGCGT..GCAG LOC_Os05g30140.2 11 2 U2 GTATGCGT..CTAG LOC_Os07g47630.2 9 2 U2 GTAACATT..TTAG LOC_Os07g47630.1 10 2 U2 GTAACATT..GCAG LOC_Os07g47630.3 10 2 U2 GTAACATT..TTAG LOC_Os07g47630.4 10 2 U2 GTAACATT..TTAG LOC_Os07g47630.6 10 2 U2 GTAACATT..TTAG LOC_Os07g47630.7 10 2 U2 GTAACATT..TTAG LOC_Os07g47630.8 10 2 U2 GTAACATT..TTAG LOC_Os03g22380.1 10 2 U2 GTAACACG..GCAG estExt_fgenesh1_kg.C_chr_10401 10 2 U2 GTAACATA..GCAG AT1G02840.1 9 2 U2 GTAATGAT..GCAG GSVIVP00027992001 9 2 U2 GTATGCCT..GCAG Glyma03g37240.2 10 2 U2 GTATGAAA..GCAG Glyma03g37240.3 10 2 U2 GTATGAAA..GCAG Glyma19g39850.8 10 2 U2 GTATGAAA..GCAG Glyma19g39850.1 10 2 U2 GTATGAAA..GCAG Glyma19g39850.6 10 2 U2 GTTTTGAA..GCAG Glyma19g39850.7 10 2 U2 GTATGAAA..GCAG Glyma19g39850.5 10 2 U2 GTATGAAA..GCAG Glyma19g39850.9 10 2 U2 GTATGAAA..GCAG Glyma19g39850.3 10 2 U2 GTATGAAA..GCAG Glyma03g37240.1 10 2 U2 GTATGAAA..TTAG Glyma19g39850.10 10 2 U2 GTATGAAA..TTAG Glyma19g39850.11 10 2 U2 GTATGAAA..TTAG 24: 358-358 LOC_Os07g47630.1 11 0 U2 GTAAGTTT..TTAG LOC_Os03g22380.1 11 0 U2 GTAAGTTC..CCAG estExt_fgenesh1_kg.C_chr_10401 11 0 U2 GTAAGTTC..GCAG AT1G02840.1 10 0 U2 GTGAGTAA..ACAG GSVIVP00027992001 10 0 U2 GTAAGTGT..GCAG Glyma03g37240.2 11 0 U2 GTGAGTGA..CCAG Glyma03g37240.3 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.8 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.1 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.6 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.7 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.5 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.9 11 0 U2 GTGAGTGA..GCAG Glyma19g39850.3 11 0 U2 GTGAGTGA..CCAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	----SESPTKASPPLV-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ISG--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ILMACGAQTPATSWYETE------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------SPSSSS------------------------------------------------ L----------------------------------------------------------- PPPATSPPREKSASKSPVKSRSLSRSPSPVKSE--------------------------- LDALRTKGWFGTLDSSAG------------------------------------------ ------------------------------------------------------------ ANGDAASPKKRSPSRSPPKKRSPSRSPSRSRSPDAKSE---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ANGEASSPKKRSPSRSPSRSRSPDAKSE-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ANGEAASPKKQSPNRSPSGSRSPDAKPE-------------------------------- QKEGSKSPSKPSPAKSPIHTRSPSR----------------------------------- ------------------------------------------------------------ QKRASKSPKKHSPSKSPSRSRSRSPSKSLSRSNFHALTFLVVDFPFSIWGSKVCSFVHCN ----NKSPKKRSASRSPSRSRSKSKSLSR------------------------------- ----NKSPKKRSASRSPSRSRSKSKSLSRSLS---------------------------- ----NKSPKKRSASRSPSRSRSRSKSLSR------------------------------- LPPRNKSPKKRSASRSPSRSRSRSKSLSR------------------------------- ----NKSPKKRSASRSPSRSRSRSKSLSRSLS---------------------------- ----NKSPKKRSASRSPSRSRSRSKSLSR------------------------------- ----NKSPKKRSASRSPSRSRSRSKSLSR------------------------------- ----NKSPKKRSASRSPSRSRSRSKSLSR------------------------------- ------------------------------------------------------------ --PRNKSPKKRSASRSPSRSRSRSKSKL-------------------------------- ----NKSPKKRSASRSPSRSRSRSKSKL-------------------------------- WDLVQLSATHFVVEITVQVQVPIASA---------------------------------- WDLVQLSATHFVVEIGNQGDHGLPF----------------------------------- WDLVQLSATHFVVEV---------------------------------------------	25: 362-362 Glyma19g39850.4 11 0 U2 GTGAGTGA..CCAG Glyma19g39850.2 11 0 U2 GTGAGTGA..CCAG 26: 365-365 LOC_Os05g30140.1 12 0 U2 GTAAGTTT..GCAG 27: 373-373 Glyma03g37240.1 11 0 U2 GTATGATA..GCAG Glyma19g39850.10 11 0 U2 GTATGATA..CTAG 28: 383-388 LOC_Os05g30140.1 13 0 U2 GTCCGTGA..TCAG LOC_Os03g22380.1 12 0 U2 GTATGCAT..CCAG estExt_fgenesh1_kg.C_chr_10401 12 0 U2 GTAAAATG..GCAG AT1G02840.1 11 2 U2 GTACATAA..GCAG Glyma03g37240.2 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.8 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.4 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.6 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.7 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.5 12 2 U2 GTCTCTAT..GCAG Glyma19g39850.2 12 1 U2 GTTTGTCT..GCAG Glyma19g39850.3 12 1 U2 GTTTGTCT..GCAG Glyma03g37240.1 12 1 U2 GTGAGTGA..CCAG 29: 393-393 LOC_Os07g47630.1 12 0 U2 GTATATAG..TCAG
Pt~gw1.XII.145.1 Pp~estExt_Genewise1.C_280136 Pp~e_gw1.7.233.1 Pp~e_gw1.173.63.1 At~AT1G09140.1 Zm~GRMZM2G331811_T01 Zm~GRMZM2G331811_T03 Zm~GRMZM2G331811_T05 Zm~GRMZM2G331811_T07 Zm~GRMZM2G331811_T02 Mt~AC134522_50.2 Pt~fgenesh4_pg.C_LG_XIII000080 Pt~fgenesh4_pm.C_scaffold_133000019 Mt~AC144541_44.2 Lj~chr5.CM0299.260.nc Gm~Glyma20g38060.1 Gm~Glyma20g38060.2 Os~LOC_Os05g30140.1 Os~LOC_Os05g30140.2 Os~LOC_Os07g47630.2 Os~LOC_Os07g47630.1 Os~LOC_Os07g47630.3 Os~LOC_Os07g47630.4 Os~LOC_Os07g47630.6 Os~LOC_Os07g47630.7 Os~LOC_Os07g47630.8 Os~LOC_Os03g22380.3 Os~LOC_Os03g22380.1 Os~LOC_Os03g22380.2 Zm~GRMZM2G436092_T01 Zm~GRMZM2G436092_T02 Sb~estExt_fgenesh1_kg.C_chr_10401 At~AT1G02840.1 Pt~gw1.II.749.1 Vv~GSVIVP00027992001 Gm~Glyma03g37240.2 Gm~Glyma03g37240.3 Gm~Glyma19g39850.8 Gm~Glyma19g39850.4 Gm~Glyma19g39850.1 Gm~Glyma19g39850.6 Gm~Glyma19g39850.7 Gm~Glyma19g39850.5 Gm~Glyma19g39850.9 Gm~Glyma19g39850.2 Gm~Glyma19g39850.3 Gm~Glyma03g37240.1 Gm~Glyma19g39850.10 Gm~Glyma19g39850.11	---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- FLCS ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ---- ----
		3' UTR introns