SRGD Gene ID 226 BLASTp at NCBI n/a n/a  
OrganismsAt ,Os ,Sb ,Vv ,Pt ,Gm ,Zm
Gene count19
Cintron count11
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Zm~GRMZM2G064612_T01
Zm~GRMZM2G064612_T02
Zm~GRMZM2G064612_T03
Sb~e_gw1.1.19228.1
Os~LOC_Os04g02870.3
Os~LOC_Os04g02870.4
Os~LOC_Os04g02870.1
Os~LOC_Os04g02870.2
Zm~GRMZM2G021223_T02
Sb~estExt_fgenesh1_kg.C_chr_60010
Zm~GRMZM2G021223_T01
Gm~Glyma07g05900.2
Gm~Glyma16g02500.1
Gm~Glyma07g05900.1
Vv~GSVIVP00008658001
Pt~gw1.XIV.1813.1
Pt~eugene3.00021623
At~AT2G46610.1
At~AT3G61860.1
--MRPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKLGYAFIYFEDERDAEDAIRRLDNV
--MRPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKLGYAFIYFEDERDAEDAIRRLDNV
--MRPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKLGYAFIYFEDERDAEDAIRRLDNV
--MRPVFCGNFDHDTRQYDLERLFSKYGSISRIDMKTGYAFIYFEDERDAEDAIRRLDNV
MLSSDPSMESTNNHTSALHTIRYF------------AGFAFVYFEDERDGDEAIRALDGY
MLSSDPSMESTNNHTSALHTIRYF------------AGFAFVYFEDERDGDEAIRALDGY
--MRPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGY
--MRPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGY
--MRPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKSGYAFVYFEDERDGNDAIRALDGY
--MRPVFVGNLDYDTRHSELDQLFYRYGRVERIDMKSGFAFVYFEDERDGNDAIRALDGY
--MRPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKSGYAFVYFEDERDGNDAIRALDGY
MCISP----------------HLY------------SGFAFVYYEDERDAEEAIRALDNV
--MRPIFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNV
--MRPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNV
--MRPIFCGNFEYETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDEHDADDAIRGLDNI
---RPIFVGNFEQETRQSELERLFRKYGRVERVDMKSGFAFVYFEDDRDAADAIRGLDNI
-MARPVFVGNFEHETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDDRDAADAVRGLDNI
--MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNT
--MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNF
2: 2-2
AT2G46610.1 0 0 U2 ..
AT3G61860.1 0 0 U2 ..
3: 36-36
e_gw1.1.19228.1 0 1 U2 GTACTCGA..GTAG
LOC_Os04g02870.3 2 1 U2 GTGCAGTA..TTAG
LOC_Os04g02870.4 2 1 U2 GTGCAGTA..TTAG
LOC_Os04g02870.1 1 1 U2 GTCTGCCT..TTAG
LOC_Os04g02870.2 0 1 U2 GTCTGCCT..TTAG
estExt_fgenesh1_kg.C_chr_60010 1 1 U2 GTCTGCTC..GCAG
Glyma07g05900.2 0 1 U2 GTGTTGTA..ACAG
Glyma16g02500.1 0 1 U2 GTAAAACC..ACAG
Glyma07g05900.1 0 1 U2 GTAAAACC..ACAG
gw1.XIV.1813.1 0 1 U2 GTAAACTG..GCAG
eugene3.00021623 0 1 U2 GTAAACTG..GCAG
Zm~GRMZM2G064612_T01
Zm~GRMZM2G064612_T02
Zm~GRMZM2G064612_T03
Sb~e_gw1.1.19228.1
Os~LOC_Os04g02870.3
Os~LOC_Os04g02870.4
Os~LOC_Os04g02870.1
Os~LOC_Os04g02870.2
Zm~GRMZM2G021223_T02
Sb~estExt_fgenesh1_kg.C_chr_60010
Zm~GRMZM2G021223_T01
Gm~Glyma07g05900.2
Gm~Glyma16g02500.1
Gm~Glyma07g05900.1
Vv~GSVIVP00008658001
Pt~gw1.XIV.1813.1
Pt~eugene3.00021623
At~AT2G46610.1
At~AT3G61860.1
SFGYNRRRLSVEWSR---QVEPVPKSR-DRPTGDVKPTRTLFVINFDPIRTKVQDIEKHF
SFGYNRRRLSVEWSR---QVEPVPKSR-DRPTGDVKPTRTLFVINFDPIRTKVQDIEKHF
SFGYNRRRLSVEWSR---QVEPVPKSR-DRPTGDVKPTRTLFVINFDPIRTKVQDIEKHF
SFGYDRRKLSVEWSR---QVEPVPKSR-DRPTGDVKPTRTLFVINFDPMRTKVQDIERHF
PFGPGRRRLSVEWSR---GDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHF
PFGPGRRRLSVEWSR---GDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHF
PFGPGRRRLSVEWSR---GDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHF
PFGPGRRRLSVEWSR---GDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHF
PFGPGRRRLSVEWSR---GEQAGRRDG-NKPEANTKPTRTLFVINFDPMNTRVSDIERHF
PFGPGRRRLSVEWSR---GDRAARRDG-NKPEANTKPTRTLFVINFDPINTRVSDIERHF
PFGPGRRRLSVEWSR---GEQAGRRDG-NKPEANTKPTRTLFVINFDPMNTRVSDIERHF
PFGHEKRRLSVEWAR---GERGRHHDG-SK--ANQKPTKTLFVINFDPIRTRVRDIEKHF
PFGHEKRRLSVEWAR---GERGRHRDG-SK--ANQKPTKTLFVINFDPIRTRVRDIEKHF
PFGHEKRRLSVEWAR---GERGRHHDG-SK--ANQKPTKTLFVINFDPIRTRVRDIEKHF
PFGYDRRRLSVEWAK---GERGRHREG-SRSMANQRPTKTLFVINFDPIRTRIRDIERHF
PFGYDRRRLSVEWARVYAGERGRHRDG-PRSTVNQRPTKTLFVINFDPIHTRVEDIKRHF
PFGYDRRRLSVEWAR---GERGRHRDG-PRSTANQRPTKTLFVINFDPIHTRVEDIKRHF
TFGYGRRKLSVEWAKDFQGERGKPRDG--KAVSNQRPTKTLFVINFDPIRTRERDMERHF
PFGYEKRRLSVEWAK---GERGRPRGD-AKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF
4: 74-74
e_gw1.1.19228.1 1 0 U2 GTAATTTC..TCAG
LOC_Os04g02870.3 3 0 U2 GTAATTTC..ACAG
LOC_Os04g02870.4 3 0 U2 GTAATTTC..ACAG
LOC_Os04g02870.1 2 0 U2 GTAATTTC..ACAG
LOC_Os04g02870.2 1 0 U2 GTAATTTC..ACAG
estExt_fgenesh1_kg.C_chr_60010 2 0 U2 GTAATTCC..GTAG
Glyma07g05900.2 1 0 U2 GTATGATA..GCAG
Glyma16g02500.1 1 0 U2 GTATGATA..GCAG
Glyma07g05900.1 1 0 U2 GTATGATA..GCAG
eugene3.00021623 1 0 U2 GTATATGG..CTAG
5: 77-77
gw1.XIV.1813.1 1 0 U2 GTTCTCAC..CTAG
Zm~GRMZM2G064612_T01
Zm~GRMZM2G064612_T02
Zm~GRMZM2G064612_T03
Sb~e_gw1.1.19228.1
Os~LOC_Os04g02870.3
Os~LOC_Os04g02870.4
Os~LOC_Os04g02870.1
Os~LOC_Os04g02870.2
Zm~GRMZM2G021223_T02
Sb~estExt_fgenesh1_kg.C_chr_60010
Zm~GRMZM2G021223_T01
Gm~Glyma07g05900.2
Gm~Glyma16g02500.1
Gm~Glyma07g05900.1
Vv~GSVIVP00008658001
Pt~gw1.XIV.1813.1
Pt~eugene3.00021623
At~AT2G46610.1
At~AT3G61860.1
EPYGKIANIRIRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDGDRDDRY
EPYGKIANIRIRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDGDRDDRY
EPYGKIANIRIRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDGDRDDRY
EPYGKIANIRIRRNFAFVQYETQEEASAAVKNTDKSTILDRVVTVEYAFRDDDSERDDRY
EPFGKLSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFR-DDTERGDRY
EPFGKLSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFR-DDTERGDRY
EPFGKLSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFR-DDTERGDRY
EPFGKLSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFR-DDTERGDRY
TPFGNISSVRIRKNFAFVQFETMEEARKALEATHATTLLDRVISVEYAFR-DDSEVSDRY
APFGNLSSVRIRKNFAFVQFETLEEARKALDATHATTLLDRVISVEYAFR-DDSERSDRY
TPFGNISSVRIRKNFAFVQFETMEEARKALEATHATTLLDRVISVEYAFR-DDSEVSDRY
EPYGNVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALR-DDGERGDNY
EPYGNVLHVRIRRNFAFVQFETQEDATKAIECTNMSKILDRVVSVEYALR-DDGERGDNY
EPYGNVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALR-DDGERGDNY
EPYGKVLHVRIRRNFAFVQYETQEDATKALECTHMSKILDRVVSVEYALR-DDS---DKY
ERYGEVLHVRIRRNFAFVQFETQEDATKALQRTHMTKILDRVVSVEYALR-DDSERGDRY
ERYGEVLHVRIRRNFAFVQFETQEDATKALECTHMTKILDRVVSVEYALR-DDSERGDRY
EPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALR-EAGEREDRY
EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALK-DDDERDDRN
6: 154-154
e_gw1.1.19228.1 2 2 U2 GTATTATT..ACAG
LOC_Os04g02870.3 4 2 U2 GTATGAAT..GCAG
LOC_Os04g02870.4 4 2 U2 GTATGAAT..GCAG
LOC_Os04g02870.1 3 2 U2 GTATGAAT..GCAG
LOC_Os04g02870.2 2 2 U2 GTATGAAT..GCAG
estExt_fgenesh1_kg.C_chr_60010 3 2 U2 GTAAGCCT..GCAG
Glyma07g05900.2 2 2 U2 GTAAGCGG..GCAG
Glyma16g02500.1 2 2 U2 GTAAGTGA..GCAG
Glyma07g05900.1 2 2 U2 GTAAGCGG..GCAG
gw1.XIV.1813.1 2 2 U2 GTTAGTCA..GCAG
eugene3.00021623 2 2 U2 GTTAGTCA..GCAG
Zm~GRMZM2G064612_T01
Zm~GRMZM2G064612_T02
Zm~GRMZM2G064612_T03
Sb~e_gw1.1.19228.1
Os~LOC_Os04g02870.3
Os~LOC_Os04g02870.4
Os~LOC_Os04g02870.1
Os~LOC_Os04g02870.2
Zm~GRMZM2G021223_T02
Sb~estExt_fgenesh1_kg.C_chr_60010
Zm~GRMZM2G021223_T01
Gm~Glyma07g05900.2
Gm~Glyma16g02500.1
Gm~Glyma07g05900.1
Vv~GSVIVP00008658001
Pt~gw1.XIV.1813.1
Pt~eugene3.00021623
At~AT2G46610.1
At~AT3G61860.1
DI--PKQ---GAYDRR--GGSPYMRSPSPRYRRDYVPDYGRRGRYPGYGRRDGAMYE-RR
DI--PKQ---GAYDRR--GGSPYMRSPSPRYRRDYVPDYGRRGRYPGYGRRDGAMYE-RR
DI--PKQ---GAYDRR--GGSPYMRSPSPRYRRDYVPDYGRRGRYPGYGRRDGAMYE-RR
GS--PKR---GAYDRR--RGNPYLRSPSPRYRR---------ERSPVYDR-----YNRGR
DG--AR----GGYGRR--DDSPYRRSVSPVYRSRPSPDYGR-QRSPVYGS-----YD--R
DG--AR----GGYGRR--DDSPYRRSVSPVYRSRPSPDYGR-QRSPVYGS-----YD--R
DG--AR----GGYGRR--DDSPYRRSVSPVYRSRPSPDYGR-QRSPVYGS-----YD--R
DG--AR----GGYGRR--DDSPYRRSVSPVYRSRPSPDYGR-QRSPVYGS-----YD--R
GS--PRRG--GGYDLLLIDQGPHLRNEEHMTNREPS-------VMP-YMA----------
DS--PRRG--GGYGRR--GD-------SPVYRSRPSPDYGR-PASPVYGS-----YD--R
GS--PRRG--GGYGRR--GD-------SPVYRSRPSPDYGR-PASPVYGS-----YD-GP
DS--PRRR--GGYERS----------PSP-YHRRPSPDYGR-PRSPVYDR-----YN-GG
DS--PRR---GGYERS----------PSP-YHRRPSPDYGR-PRSPVYDR-----YN-GG
DS--PRRR--GGYERS----------PSP-YHRRPSPDYGR-PRSPVYDR-----YN-GG
DS--PRR---GVLMGD-------RLVQ---------------------------------
DS--PRR---GSYYGR---------SPSPAHHRRPNPDYGR-GHSPVYDK-----YN---
DS--PRR---GSYNGR---------SPSPVYRRRPSPDYVR-ARSPVYDK-----YN---
AG--SRR----------------RRSPSPVYRRRPSPDYTR-RRSPEYDR-----YK-GP
GGRSPRRSLSPVYRRR--PSPDYGRRPSPGQGRRPSPDYGR-ARSPEYDR-----YK-GP
7: 212-212
e_gw1.1.19228.1 3 2 U2 GTACAGTC..AAAG
Zm~GRMZM2G064612_T01
Zm~GRMZM2G064612_T02
Zm~GRMZM2G064612_T03
Sb~e_gw1.1.19228.1
Os~LOC_Os04g02870.3
Os~LOC_Os04g02870.4
Os~LOC_Os04g02870.1
Os~LOC_Os04g02870.2
Zm~GRMZM2G021223_T02
Sb~estExt_fgenesh1_kg.C_chr_60010
Zm~GRMZM2G021223_T01
Gm~Glyma07g05900.2
Gm~Glyma16g02500.1
Gm~Glyma07g05900.1
Vv~GSVIVP00008658001
Pt~gw1.XIV.1813.1
Pt~eugene3.00021623
At~AT2G46610.1
At~AT3G61860.1
SPVYDR---YGGGRSPAYDR-----YDRRR--------SPGYDQY-------------
SPVYDR---YGGGRSPAYDR-----YDRRR--------SPGYDQY-------------
SPVYDR---YGGGRSPAYDR-----YDRRR--------SPGYDQY-------------
SPVYDR---YNRGRSPVYDG-----YDRRG--------SPGYDQY-------------
SPVNDR---Y-RSRSPVR-RSRSPLANRRA-----------YD---------------
SPVNDR---Y-RSRSPVR-RSRSPLANRRA-----------YD---------------
SPVNDR---Y-RSRSPVR-RSRSPLANRRA-----------YD---------------
SPVNDR---Y-RSRSPVR-RSRSPLANRRA-----------YD---------------
----------------------------------------------------------
SPVRDR---Y-R-RSPAY-RSRSPRVNRRA-----------YD---------------
GPVRDR---Y-R-RSPAY-RSRSPPAKRRA-----------YD---------------
GPDMRRSPDYGRHRSPDYGRRRSPDYGKPR--------SPEYGRYRSCSRSPVRRSRT
GPDRRRSPDYGRHRSPDYGRRRSPDYGRRKSPDYGKPRSPEYGRYR--SRSPVRRSRT
GPDMRRSPDYGRHRSPDYGRRRSPDYGKPR--------SPEYGRYRSCSRSPVRRSRT
----------------------------------------------------------
GPVHDR------RRSPDYGRNRSPEYGRHR----------------------------
GPVYDR------RQSPDYGRNRSPEYGRNR-----R----------------------
AP-------YERRKSPDYGR-RSSDYGRAR------ARSPGYDRSR--SPIQRARG--
AAYERR-------RSPDYGR-RSSDYGRQR--------SPGYDRYR--SRSPVPRGRP
8: 251-251
LOC_Os04g02870.3 5 2 U2 GTATGTCC..GCAG
LOC_Os04g02870.4 5 2 U2 GTATGTCC..GCAG
LOC_Os04g02870.1 4 2 U2 GTATGTCC..GCAG
LOC_Os04g02870.2 3 2 U2 GTATGTCC..GCAG
estExt_fgenesh1_kg.C_chr_60010 4 2 U2 GTATGCCC..GCAG
9: 285-285
Glyma07g05900.2 3 2 U2 GTATTGTA..GCAG
Glyma16g02500.1 3 2 U2 GTATTGTA..GCAG
Glyma07g05900.1 3 2 U2 GTATTGTA..GCAG