SRGD Gene ID 225 BLASTp at NCBI n/a n/a  
OrganismsGm ,Mt ,Vv ,Os ,Zm ,Pp ,Lj ,Sb ,Pt ,At
Gene count19
Cintron count12
Cintron classesU2 ,em ,im ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~chr1.LjT04O21.100.nd
Pp~estExt_Genewise1.C_1090004
Pp~e_gw1.3.614.1
Pp~e_gw1.278.27.1
At~AT3G07860.1
Pt~fgenesh4_pm.C_LG_II000072
Vv~GSVIVP00015525001
Gm~Glyma12g03170.1
Gm~Glyma11g10920.1
Gm~Glyma11g10970.2
Gm~Glyma11g10970.3
Gm~Glyma11g10970.1
Lj~LjSGA_146705.1
Mt~AC122726_14.2
Mt~AC146776_33.2
Mt~AC125476_1.2
Os~LOC_Os04g56770.1
Zm~GRMZM2G047321_T01
Sb~fgenesh1_pg.C_chr_6002546
------------------------------------------------------------
-------------------------------------------------MMLGVRRGDMG
------------------------------------------------------MRGDLG
--------------------------------------------------MSGVRRGDLG
-----------------------------------------------------MESGDYD
--------------------------------------------MESSSKGEDEVGGYNS
-----------------------------------------MESSGGGKREEEDVGSYNS
------------------------------------------------------MEEYNK
------------------------------------------------------MEEYNK
------------------------------------------------------MEEYNK
------------------------------------------------------MEEYNK
MLDDYHCPFCSCHEEEASHIFFGCQRIMPLWWESLAWTEADQKVGCFGKLGSINMEEYNK
------------------------------------------------------------
----------------------------------------------------MGEGAEYK
----------------------------------------------------MGEGAEYK
----------------------------------------------------MGEGAEYK
------------------------------MDPGKSFSAAEEEATDSVSTKPEEVAAYQS
--------------------------------------------MDPSSGKPEEVAAYQS
--------------------------------------------MDSGSGKPEVVAAYQS
2: 0-0
Glyma11g10970.1 0 0 U2 GTAGAAAT..GCAG
AC125476_1.2 1 0 U2 ..
3: 38-38
Glyma11g10970.1 1 0 U2 GTTGTAAC..GCAG
4: 52-52
AC125476_1.2 0 0 U2 ..
Lj~chr1.LjT04O21.100.nd
Pp~estExt_Genewise1.C_1090004
Pp~e_gw1.3.614.1
Pp~e_gw1.278.27.1
At~AT3G07860.1
Pt~fgenesh4_pm.C_LG_II000072
Vv~GSVIVP00015525001
Gm~Glyma12g03170.1
Gm~Glyma11g10920.1
Gm~Glyma11g10970.2
Gm~Glyma11g10970.3
Gm~Glyma11g10970.1
Lj~LjSGA_146705.1
Mt~AC122726_14.2
Mt~AC146776_33.2
Mt~AC125476_1.2
Os~LOC_Os04g56770.1
Zm~GRMZM2G047321_T01
Sb~fgenesh1_pg.C_chr_6002546
-------------------MINQIPSSPMMIVNDSFLYHRLPSQTLKLSILKLDASSF--
TYFKRSQFKPLVSSFREDP----VGTAGTVAKVDSLIGVELGT-SMKLSILKLDGSHF--
TYFRRSQFEPLVSTLLDDPILADVPKNATVADIDTLIGVELGS-AMKLSILKLDGSHL--
TYFRRSQFEPLVSTLPYEHSLDHVPKNETVVGTDTLIGVKLGS-AIRLSILKLDGIHF--
VETKREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGS-AMRLSVVKLDGSSL--
SNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGS-AMRISVQKLDGTSF--
NNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGS-AMRISVIKLDSTSF--
SRVKKARLNSLLTTLLDDPILSDFPKNPTFADVDTLINLEMGS-AMRISVLKLDGTTF--
SSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGS-AMRISVLKLDGTTL--
SSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGS-AMRISVLKLDGTTL--
SSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGS-AMRISVLKLDGTTL--
SSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGS-AMRISVLKLDGTTL--
------------------------------------------------------------
SGLKKAK---VLKALLEDPILADVPKNPTLEDVETLIGLELGS-AMRITVLKLDTTSF--
SGLKKAK---VLKALLEDPILADVPKNPTLEDVETLIGLELGS-AMRITVLKLDTTSF--
SGLKKAK---VLKALLEDPILADVPKNPTLEDVETLIGLELGS-AMRITVLKLDTTSF--
SEAKQAKLQSMLAALLDDPILADVPRKPSLADVDTLINLELGS-AMRLTVVKLDGTSFGT
KEAKQARLQSMLAALLDDPILADVTRKPSLADVDTLINLELGS-AMRLTVVKLDNTSF--
KEAKQARLQSMLAALLDDPILADVPRKPSLADVDTLINLELGS-AMRLSVVKLDNTSF--
5: 117-119
chr1.LjT04O21.100.nd 0 1 U2 GTAATTCT..GAAG
estExt_Genewise1.C_1090004 0 1 U2 GTATGTGG..CCAG
e_gw1.3.614.1 0 1 U2 GTATCCCC..CCAG
e_gw1.278.27.1 0 1 U2 GTACATAC..TCAG
AT3G07860.1 0 1 U2 GTACATAT..GCAG
fgenesh4_pm.C_LG_II000072 0 1 U2 GTATTCAA..GAAG
GSVIVP00015525001 0 1 U2 GTACCAAA..GAAG
Glyma12g03170.1 0 1 U2 GTAATACT..CAAG
Glyma11g10920.1 0 1 U2 GTAATACT..TAAG
Glyma11g10970.2 1 1 U2 GTAATACT..TAAG
Glyma11g10970.3 2 1 U2 GTAATACT..TAAG
Glyma11g10970.1 2 1 U2 GTAATACT..TAAG
LOC_Os04g56770.1 0 1 U2 GTCCCTTC..AAAG
GRMZM2G047321_T01 0 1 U2 GTACGCAT..AAAG
fgenesh1_pg.C_chr_6002546 0 1 U2 GTACTCAT..AAAG
Lj~chr1.LjT04O21.100.nd
Pp~estExt_Genewise1.C_1090004
Pp~e_gw1.3.614.1
Pp~e_gw1.278.27.1
At~AT3G07860.1
Pt~fgenesh4_pm.C_LG_II000072
Vv~GSVIVP00015525001
Gm~Glyma12g03170.1
Gm~Glyma11g10920.1
Gm~Glyma11g10970.2
Gm~Glyma11g10970.3
Gm~Glyma11g10970.1
Lj~LjSGA_146705.1
Mt~AC122726_14.2
Mt~AC146776_33.2
Mt~AC125476_1.2
Os~LOC_Os04g56770.1
Zm~GRMZM2G047321_T01
Sb~fgenesh1_pg.C_chr_6002546
YVEVAKTANVAELKKAVEATFGYMPQK--GPGKISW---------PHVWGQFCLSYEGHK
DVVVLTNSRVRDLKQAVVKYVDHLEQSELGHKRISW---------QHVWGHFCLCHGTEK
EVAVLNNAKVRDLKQAVMKYVDFQEQSHLGQRHISW---------SHVWDHFCLSYGKEK
EVTVPNNGKVRDLKQSIMMYVDSDEQSQLGHRHISW---------KHVWNNFCLSFGKEK
DVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISW---------KHVWSNFCLSCNNEK
DVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISW---------KKVWANFALSYHNQK
DVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISW---------KHVWANFCLSYYNDK
-----------GLKLAIKKKVNDMEQSSMGHRHISW---------KHICENYCLSCHNNK
DVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISW---------KHVWANYCLSCHNNK
DVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISW---------KHVWANYCLSCHNNK
DVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISW---------KHVWANYCLSCHNNK
DVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISW---------KHVWANYCLSCHNNK
-------------KLAIKKKVNDMEQSNMGHRQISW---------RGVWAKCCLSYNNHK
DVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISW---------RSVWANYCLSFDNNK
DVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISW---------RSVWANYCLSFDNNK
DVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISW---------RSVWANYCLSFDNNK
DVAMLNTATVKDLKMAIRKKTDEIEQEKMGHRHISWFLFFFMAFFQELSDPFTASSDHWK
DVAVLNSATVKDLKLAIRKKINEIEQEKMGHRHISW---------KHVWDNYCLTHHNEK
EVAVLNSATVKDLKLAIRKKINEIEQEQMGHRHISW---------KHVWDNYCLTHHNEK
6: 154-154
chr1.LjT04O21.100.nd 1 2 U2 GTGCGTGT..ATAG
estExt_Genewise1.C_1090004 1 2 U2 GTGGGTAC..GCAG
e_gw1.278.27.1 1 2 U2 GTTAATAC..GCAG
AT3G07860.1 1 2 U2 GTAAATAG..GCAG
fgenesh4_pm.C_LG_II000072 1 2 U2 GTAAGCTA..GCAG
GSVIVP00015525001 1 2 U2 GTATGATA..GCAG
Glyma12g03170.1 1 2 U2 GTGAGTTG..GCAG
Glyma11g10920.1 1 2 U2 GTGAGTTA..GTAG
Glyma11g10970.2 2 2 U2 GTGAGTTA..GTAG
Glyma11g10970.3 3 2 U2 GTGAGTTA..GTAG
Glyma11g10970.1 3 2 U2 GTGAGTTA..GTAG
AC122726_14.2 0 2 U2 GTCAGTTT..GCAG
LOC_Os04g56770.1 1 2 U2 GTAAAGCC..CTAG
GRMZM2G047321_T01 1 2 U2 GTAAGGAA..CCAG
fgenesh1_pg.C_chr_6002546 1 2 U2 GTAAGGAA..CCAG
7: 165-165
e_gw1.3.614.1 1 0 U2 GTAATAAA..GAAG
8: 172-172
LOC_Os04g56770.1 2 1 U2 GTATAATC..CTAG
Lj~chr1.LjT04O21.100.nd
Pp~estExt_Genewise1.C_1090004
Pp~e_gw1.3.614.1
Pp~e_gw1.278.27.1
At~AT3G07860.1
Pt~fgenesh4_pm.C_LG_II000072
Vv~GSVIVP00015525001
Gm~Glyma12g03170.1
Gm~Glyma11g10920.1
Gm~Glyma11g10970.2
Gm~Glyma11g10970.3
Gm~Glyma11g10970.1
Lj~LjSGA_146705.1
Mt~AC122726_14.2
Mt~AC146776_33.2
Mt~AC125476_1.2
Os~LOC_Os04g56770.1
Zm~GRMZM2G047321_T01
Sb~fgenesh1_pg.C_chr_6002546
LVTDTDYLRDY-------GIKDGN------------------------------------
LVDDDARLAGF-------GIRNNDQ----LRFEHHVSLRDEGQYLRAKKRRFFHGLIKTD
LLDDDARLHDF-------GIRKNDE----LRFEHHVATREEGRHSRAKKRRFFHGLRKT-
LVDDDARLHDF-------GIRNNDE----LRFEHHVAAREEFRHPRVMKPRFFYGPHKN-
LLDDNAVLQDV-------GIRNNSQ----VTFMPYVMKKGRGRHSKRKKHRLFRSLHKTS
LLDDNSALQDS-------GIRNNSQ----VHFASYVMSKDSQRHSKRRKHRFFHGLNKRA
LINDGSALQDF-------GIHNNSQ----VHFVPFIMSKGSQRHSRRRKHRFFHGLNKRI
LLDDNDALQHF-------GVRNNSQ----VQFVSYVMTKESRRHSKRRKHHFFHGLNRRS
LLDDNEALQNF-------GVRNNSQ----VQFVSYVMTKESRRHSKRRKHRFFHGLNKRS
LLDDNEALQNF-------GVRNNSQ----VQFVSYVMTKESRRHSKRRKHRFFHGLNKRS
LLDDNEALQNF-------GVRNNSQ----VQFVSYVMTKESRRHSKRRKHRFFHGLNKRS
LLDDNEALQNF-------GVRNNSQ----VQFVSYVMTKESRRHSKRRKHRFFHGLNKRS
LLNDDDALQNF-------GVRNNSQ----VCSL---------------------------
LLNDDDVLQNL-------GVRNNSQ----VS-STYLC------------HCWNCEIE---
LLNDDDVLQNL-------GVRNNSQ----VS-STYLC------------HCWNCEIE---
LLNDDDVLQNL-------GVRNNSQ----IHFVPYVMTKESRRHSKRRKHRFFHGLSKLS
EIPTLLPLNLHIWCLTCWGFEPQPTEYVICLFLAARYVQGISKALKKKKTPLFPWSS---
LIEDNSTLSSY-------GVRNNSK----VCFSPHVMSRVHRKHSRRRKHRFFHGLSRKA
LINDNSALSAY-------GVRNNSK----------------------KIYMFISGRPT--
9: 197-197
LOC_Os04g56770.1 3 2 U2 GTAAGTTC..TCAG
10: 204-204
estExt_Genewise1.C_1090004 2 0 U2 GTGAGTTA..ACAG
e_gw1.3.614.1 2 0 U2 GTATGGAT..GCAG
e_gw1.278.27.1 2 0 U2 GTATGTTA..ACAG
AT3G07860.1 2 0 U2 GTTAAACA..ACAG
fgenesh4_pm.C_LG_II000072 2 0 U2 GTTTCAGT..GCAG
GSVIVP00015525001 2 0 U2 GTTCTAGC..GCAG
Glyma12g03170.1 2 0 U2 GTTAGCCT..GCAG
Glyma11g10920.1 2 0 U2 GTTTGCCT..GCAG
Glyma11g10970.2 3 0 U2 GTTTGCCT..GCAG
Glyma11g10970.3 4 0 U2 GTTTGCCT..GCAG
Glyma11g10970.1 4 0 U2 GTTTGCCT..GCAG
GRMZM2G047321_T01 2 0 U2 GTAGGTCT..CTAG
fgenesh1_pg.C_chr_6002546 2 0 U2 GTATTTCT..ACAG
11: 208-208
LOC_Os04g56770.1 4 1 U2 GTGAGCTA..CTAG
Lj~chr1.LjT04O21.100.nd
Pp~estExt_Genewise1.C_1090004
Pp~e_gw1.3.614.1
Pp~e_gw1.278.27.1
At~AT3G07860.1
Pt~fgenesh4_pm.C_LG_II000072
Vv~GSVIVP00015525001
Gm~Glyma12g03170.1
Gm~Glyma11g10920.1
Gm~Glyma11g10970.2
Gm~Glyma11g10970.3
Gm~Glyma11g10970.1
Lj~LjSGA_146705.1
Mt~AC122726_14.2
Mt~AC146776_33.2
Mt~AC125476_1.2
Os~LOC_Os04g56770.1
Zm~GRMZM2G047321_T01
Sb~fgenesh1_pg.C_chr_6002546
-----------
RKTPASTASFS
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S----------
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NPAL-------
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3' UTR introns