SRGD Gene ID 221 BLASTp at NCBI n/a n/a  
OrganismsPt ,At ,Gm ,Os ,Zm ,Sb ,Mt ,Vv ,Pp ,Lj
Gene count19
Cintron count15
Cintron classesU2 ,im ,GC ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.36.199.1
Lj~LjSGA_020126.1
Vv~GSVIVP00022717001
Gm~Glyma03g37170.3
Os~LOC_Os01g15310.1
Zm~GRMZM2G038606_T01
Zm~GRMZM2G038606_T02
Zm~GRMZM2G095114_T01
Sb~estExt_Genewise1.C_chr_32091
Mt~AC141115_6.2
Mt~AC202494_26.1
Pt~eugene3.00021743
At~AT5G27720.1
Gm~Glyma19g39780.1
Gm~Glyma03g37170.1
Gm~Glyma03g37170.2
Gm~Glyma10g02380.1
Gm~Glyma02g17430.1
Gm~Glyma02g17430.2
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MVSLLATPIDVMVDVGIGASLNVLTKGDRALGSAHMPNCTTPDGDIDWDGFCVSLWGPVP
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Pp~e_gw1.36.199.1
Lj~LjSGA_020126.1
Vv~GSVIVP00022717001
Gm~Glyma03g37170.3
Os~LOC_Os01g15310.1
Zm~GRMZM2G038606_T01
Zm~GRMZM2G038606_T02
Zm~GRMZM2G095114_T01
Sb~estExt_Genewise1.C_chr_32091
Mt~AC141115_6.2
Mt~AC202494_26.1
Pt~eugene3.00021743
At~AT5G27720.1
Gm~Glyma19g39780.1
Gm~Glyma03g37170.1
Gm~Glyma03g37170.2
Gm~Glyma10g02380.1
Gm~Glyma02g17430.1
Gm~Glyma02g17430.2
--------------------------QLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------QLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
ISSLPDATTEPPRQGSRELLLDSGINGLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
--------------------------MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDT
2: 86-86
GSVIVP00022717001 0 0 U2 GTTGAGAG..TCAG
Glyma03g37170.3 0 0 U2 GTAAGTAC..GCAG
LOC_Os01g15310.1 0 0 U2 GTTCGTCT..GCAG
GRMZM2G038606_T01 0 0 U2 GTGTGTAT..GCAG
GRMZM2G038606_T02 0 0 U2 GTGTGTAT..GCAG
estExt_Genewise1.C_chr_32091 0 0 U2 GTGCGTGT..GCAG
AC141115_6.2 0 0 U2 ..
AC202494_26.1 0 0 U2 ..
eugene3.00021743 1 0 U2 GTAACCAT..GCAG
AT5G27720.1 1 0 U2 GTAAGTTA..ATAG
Glyma19g39780.1 0 0 U2 GTAATTAC..GCAG
Glyma03g37170.1 0 0 U2 GTAAGTAC..GCAG
Glyma03g37170.2 0 0 U2 GTAAGTAC..GCAG
Glyma10g02380.1 0 0 U2 GTAATGCT..GCAG
Glyma02g17430.1 0 0 U2 GTAGTAGT..GCAG
Glyma02g17430.2 0 0 U2 GTAGTAGT..GCAG
3: 100-100
GSVIVP00022717001 1 0 U2 GTAAGGGT..GCAG
Glyma03g37170.3 1 0 GC GCAACTCA..ACAG
LOC_Os01g15310.1 1 0 U2 GTAAGAGA..TTAG
GRMZM2G038606_T01 1 0 U2 GTAAGGAC..TCAG
GRMZM2G038606_T02 1 0 U2 GTAAGGAC..TCAG
estExt_Genewise1.C_chr_32091 1 0 U2 GTAAGATC..TCAG
eugene3.00021743 2 0 U2 GTAAGAAA..ACAG
AT5G27720.1 2 0 U2 GTGAGTAA..GTAG
Glyma19g39780.1 1 0 U2 GTAACTCA..ACAG
Glyma03g37170.1 1 0 GC GCAACTCA..ACAG
Glyma03g37170.2 1 0 GC GCAACTCA..ACAG
Glyma10g02380.1 1 0 U2 GTGAGTTA..ACAG
Glyma02g17430.1 1 0 U2 GTGAGTCA..ACAG
Glyma02g17430.2 1 0 U2 GTGAGTCA..ACAG
Pp~e_gw1.36.199.1
Lj~LjSGA_020126.1
Vv~GSVIVP00022717001
Gm~Glyma03g37170.3
Os~LOC_Os01g15310.1
Zm~GRMZM2G038606_T01
Zm~GRMZM2G038606_T02
Zm~GRMZM2G095114_T01
Sb~estExt_Genewise1.C_chr_32091
Mt~AC141115_6.2
Mt~AC202494_26.1
Pt~eugene3.00021743
At~AT5G27720.1
Gm~Glyma19g39780.1
Gm~Glyma03g37170.1
Gm~Glyma03g37170.2
Gm~Glyma10g02380.1
Gm~Glyma02g17430.1
Gm~Glyma02g17430.2
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-VKRSDRKPTI
WMNIHLREVICTSKEGTEFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KTRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KNRADRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPG
WMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRRPPG
WMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPG
WMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPG
WMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPG
WMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE--KSRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE--KSRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEI-KSRSDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE--KTRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRTDRKPPG
WMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRTDRKPPG
4: 133-133
GSVIVP00022717001 2 0 U2 GTATGGTA..GTAG
Glyma03g37170.3 2 0 U2 GTAATGTT..GTAG
LOC_Os01g15310.1 2 0 U2 GTGAAATC..GCAG
GRMZM2G038606_T01 2 0 U2 GTGAAAAA..GCAG
GRMZM2G038606_T02 2 0 U2 GTGAAAAA..GCAG
estExt_Genewise1.C_chr_32091 2 0 U2 GTGAAAAA..GCAG
eugene3.00021743 3 0 U2 GTGCTAGT..GTAG
AT5G27720.1 3 0 U2 GTTATCTT..CTAG
Glyma19g39780.1 2 0 U2 GTAATGTT..GTAG
Glyma03g37170.1 2 0 U2 GTAATGTT..GTAG
Glyma03g37170.2 2 0 U2 GTAATGTT..GTAG
Glyma10g02380.1 2 0 U2 GTAACGAT..TCAG
Glyma02g17430.1 2 0 U2 GTAACGAT..TCAG
Glyma02g17430.2 2 0 U2 GTAACGAT..TCAG
5: 159-159
GSVIVP00022717001 3 0 U2 GTATATTT..CCAG
Glyma03g37170.3 3 0 U2 GTGTGTAT..TTAG
LOC_Os01g15310.1 3 0 U2 GTATGGAT..ACAG
GRMZM2G038606_T01 3 0 U2 GTATGGAT..TCAG
GRMZM2G038606_T02 3 0 U2 GTATGGAT..TCAG
estExt_Genewise1.C_chr_32091 3 0 U2 GTATCAAT..TCAG
eugene3.00021743 4 0 U2 GTGCCTAT..TTAG
AT5G27720.1 4 0 U2 GTAATTTT..TCAG
Glyma19g39780.1 3 0 U2 GTGTGTAT..TTAG
Glyma03g37170.1 3 0 U2 GTGTGTAT..TTAG
Glyma03g37170.2 3 0 U2 GTGTGTAT..TTAG
Glyma10g02380.1 3 0 U2 GTGTGTGC..TTAG
Glyma02g17430.1 3 0 U2 GTGTGTGC..TTAG
Glyma02g17430.2 3 0 U2 GTGTGTGC..TTAG
6: 173-173
GSVIVP00022717001 4 1 U2 GTATGGTT..TCAG
Glyma03g37170.3 4 1 U2 GTAAGCTT..TCAG
LOC_Os01g15310.1 4 1 U2 GTATGTAC..GCAG
GRMZM2G038606_T01 4 1 U2 GTATGGAG..ACAG
GRMZM2G038606_T02 4 1 U2 GTATGGAG..ACAG
estExt_Genewise1.C_chr_32091 4 1 U2 GTATGGAG..GCAG
eugene3.00021743 5 1 U2 GTATGCTT..TTAG
AT5G27720.1 5 1 U2 GTATAGTA..GCAG
Glyma19g39780.1 4 1 U2 GTAAGCAT..TCAG
Glyma03g37170.1 4 1 U2 GTAAGCTT..TCAG
Glyma03g37170.2 4 1 U2 GTAAGCTT..TCAG
Glyma10g02380.1 4 1 U2 GTAAGCCT..AAAG
Glyma02g17430.1 4 1 U2 GTAAGCCT..TCAG
Glyma02g17430.2 4 1 U2 GTAAGCCT..TCAG
Pp~e_gw1.36.199.1
Lj~LjSGA_020126.1
Vv~GSVIVP00022717001
Gm~Glyma03g37170.3
Os~LOC_Os01g15310.1
Zm~GRMZM2G038606_T01
Zm~GRMZM2G038606_T02
Zm~GRMZM2G095114_T01
Sb~estExt_Genewise1.C_chr_32091
Mt~AC141115_6.2
Mt~AC202494_26.1
Pt~eugene3.00021743
At~AT5G27720.1
Gm~Glyma19g39780.1
Gm~Glyma03g37170.1
Gm~Glyma03g37170.2
Gm~Glyma10g02380.1
Gm~Glyma02g17430.1
Gm~Glyma02g17430.2
GGRGRGRGRAEDGVGRGRGGEGGRG-GRGYQEDGAAGGRG--GARGSGGARGGGR-----
VGRGRGRGRED-----GPGGR-----GRGFDEGGARG----RGRAGPGGRSGGNR-----
VGRGRGRGREE-----GAGGRPAKGIGRGIDEGA-KGMGGGRGRGGPGGRSGGSR-GTYY
VGRGRGRGREE-A---EAGVVPVESL---VETEGVV-------------EVDSNK-----
VGRGRGRGDIG-T---KPGGR---GIGRGQDDGGSKGGGG-RGRGGIGGK-GGIK-----
VGRGRGRGDVG-A---KPGGR---GIGRGQDDGG-RGSGG-RGRGGVGAK-GGNKVQVGA
VGRGRGRGDVG-A---KPGGR---GIGRGQDDGG-RGSGG-RGRGGVGAK-GGNK-----
VGRGRGRGDVG-A---KPGGR---GIGRGQDDGG-RGSGG-RGRGGVGAK-GGNK-----
VGRGRGRGDVG-T---KPGGR---GIGRGQDDGG-RGSGG-RGRG--VGAKGGNK-----
VGRGRGRGREDAA---GAGGRQTKGPGRGFDDGGARGAGG-RGRTSQGGKPGGSR-----
VGRGRGRGREDAA---GAGGRQTKGPGRGFDDGGARGAGG-RGRTSQGGKPGGSR-----
VGRGRGRGRED-----GPGGRPAKGIGRGLEDVAAKGMGGGRGRGGPGGKIGGSR-----
VGRGRGRG---------------------VDDGGARG----RGRGTSMGKMGGNR-----
VGRGRGRGRED-----GPGGRPAKGIGRGLDDGGAKGAGGGRGRGGPSGKPGGNR-----
VGRGRGRGREE-----GPGGRPTKGIGRGLDDGGARGAGGSRGRGGPSGKPGGNR-----
VGRGRGRGREE-----GPGGRPTKGIGRGLDDGGARGAGGSRGRGGPSGKPGGNR-----
VGRGRGRGRED-----GPGGRQPKGIGRGLDEGGPKGQGG-RGRGGPGGKPGGNR-----
VGRGRGRGRDD-----GPGGRQPKGIGRGIDEGGAKGQGG-RGRGGPGGKPSGNR-----
VGRGRGRGRDD-----GPGGRQPKGIGRGIDEGGAKGQGG-RGRGGPGGKPSGNR-----
7: 190-190
Glyma03g37170.3 5 1 U2 GTCCTGGT..GAAG
8: 212-212
Glyma03g37170.3 6 0 U2 GTAAATCA..ACAG
9: 234-234
LOC_Os01g15310.1 5 1 U2 GTATGCTT..GCAG
GRMZM2G038606_T01 5 1 U2 GTACACAC..TTAG
GRMZM2G038606_T02 5 1 U2 GTACACAC..GCAG
estExt_Genewise1.C_chr_32091 5 1 U2 GTATGTGC..ACAG
eugene3.00021743 6 1 U2 GTAAGACT..ACAG
AT5G27720.1 6 1 U2 GTAAAAAA..ACAG
Glyma19g39780.1 5 1 U2 GTAAATCA..ACAG
Glyma03g37170.1 5 1 U2 GTAAATCA..ACAG
Glyma03g37170.2 5 1 U2 GTAAATCA..ACAG
Glyma10g02380.1 5 1 U2 GTAAATCA..GTAG
Glyma02g17430.1 5 1 U2 GTAAATCA..GTAG
Glyma02g17430.2 5 1 U2 GTAAATCA..GCAG
Pp~e_gw1.36.199.1
Lj~LjSGA_020126.1
Vv~GSVIVP00022717001
Gm~Glyma03g37170.3
Os~LOC_Os01g15310.1
Zm~GRMZM2G038606_T01
Zm~GRMZM2G038606_T02
Zm~GRMZM2G095114_T01
Sb~estExt_Genewise1.C_chr_32091
Mt~AC141115_6.2
Mt~AC202494_26.1
Pt~eugene3.00021743
At~AT5G27720.1
Gm~Glyma19g39780.1
Gm~Glyma03g37170.1
Gm~Glyma03g37170.2
Gm~Glyma10g02380.1
Gm~Glyma02g17430.1
Gm~Glyma02g17430.2
-----SGGGRGMPNSLHPLRRFACYEFRTLAKSSELMFYKL--------
------GKSSLVSFQNASISCIPSTNCSFVSSS----------------
IYLFPLKQSKTIIQDICHYVCLCRLLDLPIHSMSYVKPLAPFAHTTWER
-------------------------------------------------
----GGGRGRG--------------------------------------
VVVAEAGRHKGECRFLRPVIVLHRLLRT---------------------
----GGGRGRG--------------------------------------
----GGGRGRG--------------------------------------
----GGGRGRG--------------------------------------
----GAGRGRG--------------------------------------
----GAGRGRG--------------------------------------
----GAGRGRG--------------------------------------
----GAGRGRG--------------------------------------
------GRGRG--------------------------------------
------GRGRG--------------------------------------
------V------------------------------------------
----GGGRGRG--------------------------------------
----GAGRGRG--------------------------------------
------GRGRG--------------------------------------


3' UTR introns