SRGD Gene ID 181 BLASTp at NCBI n/a n/a  
OrganismsAt ,Pt ,Mt ,Vv ,Os ,Gm ,Zm ,Pp ,Lj ,Sb
Gene count21
Cintron count12
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Lj~LjSGA_013855.1
Pp~estExt_fgenesh1_pm.C_840022
Pp~estExt_fgenesh1_kg.C_2090005
Pp~e_gw1.26.139.1
At~AT2G18740.1
At~AT4G30330.1
Pt~estExt_Genewise1_v1.C_1710010
Mt~AC196855_4.1
Mt~CU179877_9.1
Gm~Glyma17g07460.1
Gm~Glyma13g01320.1
Lj~LjSGA_010296.2
Gm~Glyma04g38600.1
Gm~Glyma06g16410.1
Vv~GSVIVP00017697001
Os~LOC_Os02g03440.1
Sb~estExt_fgenesh1_pm.C_chr_30075
Zm~GRMZM2G014091_T01
Zm~GRMZM2G386608_T01
Zm~GRMZM2G386608_T03
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIVSF--TFDACFHGCSS
-MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRII-GFDEYMNLVLDEAEE
-MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRII-GFDEYMNLVLDEAEE
-MATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRII-GFDEYMNLVLEEAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIT-GFDEYMNLVLDEAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIT-GFDEYMNLVLDEAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLEDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
---------------------------------------------GFDEYMNLVLDDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDEAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLDDAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLEDAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLEDAEE
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLEDAEE
2: 0-0
AT4G30330.1 0 0 U2 ..
AC196855_4.1 0 0 U2 ..
3: 13-13
AT2G18740.1 0 0 U2 GTACGTTT..CCAG
estExt_Genewise1_v1.C_1710010 0 0 U2 GTACGTCT..CCAG
CU179877_9.1 0 0 U2 GTACGCTT..GCAG
Glyma17g07460.1 0 0 U2 GTACCATT..TCAG
Glyma13g01320.1 0 0 U2 GTACCATT..TCAG
Glyma04g38600.1 0 0 U2 GTATGATT..TCAG
Glyma06g16410.1 0 0 U2 GTATAATT..CCAG
GSVIVP00017697001 0 0 U2 GTACGTTT..CCAG
estExt_fgenesh1_pm.C_chr_30075 0 0 U2 GTAAGCTA..GCAG
GRMZM2G014091_T01 0 0 U2 GTAAGCTA..GCAG
4: 22-22
AT2G18740.1 1 0 U2 GTAAGTTG..GCAG
estExt_Genewise1_v1.C_1710010 1 0 U2 GTAAGTCA..ACAG
CU179877_9.1 1 0 U2 GTAAGTCC..GCAG
Glyma17g07460.1 1 0 U2 GTAAGTCC..TCAG
Glyma13g01320.1 1 0 U2 GTAAGTCC..GCAG
Glyma04g38600.1 1 0 U2 GTAAGTCT..GCAG
Glyma06g16410.1 1 0 U2 GTAAGTTT..GCAG
GSVIVP00017697001 1 0 U2 GTAAGTCT..GCAG
LOC_Os02g03440.1 0 0 U2 GTACGCGC..GCAG
estExt_fgenesh1_pm.C_chr_30075 1 0 U2 GTAAGTGG..GCAG
GRMZM2G014091_T01 1 0 U2 GTAAGTGG..GCAG
5: 43-43
AT2G18740.1 2 0 U2 GTAAGTTG..GCAG
estExt_Genewise1_v1.C_1710010 2 0 U2 GTAAGTTT..GCAG
CU179877_9.1 2 0 U2 GTAAGTTT..ACAG
Glyma17g07460.1 2 0 U2 GTGAGTCT..ATAG
Glyma13g01320.1 2 0 U2 GTGAGTCT..ATAG
Glyma04g38600.1 2 0 U2 GTGAGTCT..ACAG
Glyma06g16410.1 2 0 U2 GTGAGTCT..TCAG
GSVIVP00017697001 2 0 U2 GTAAGTAT..ACAG
LOC_Os02g03440.1 1 0 U2 GTAAGTTC..GTAG
estExt_fgenesh1_pm.C_chr_30075 2 0 U2 GTGAGTTT..GCAG
GRMZM2G014091_T01 2 0 U2 GTGAGTTT..CCAG
Lj~LjSGA_013855.1
Pp~estExt_fgenesh1_pm.C_840022
Pp~estExt_fgenesh1_kg.C_2090005
Pp~e_gw1.26.139.1
At~AT2G18740.1
At~AT4G30330.1
Pt~estExt_Genewise1_v1.C_1710010
Mt~AC196855_4.1
Mt~CU179877_9.1
Gm~Glyma17g07460.1
Gm~Glyma13g01320.1
Lj~LjSGA_010296.2
Gm~Glyma04g38600.1
Gm~Glyma06g16410.1
Vv~GSVIVP00017697001
Os~LOC_Os02g03440.1
Sb~estExt_fgenesh1_pm.C_chr_30075
Zm~GRMZM2G014091_T01
Zm~GRMZM2G386608_T01
Zm~GRMZM2G386608_T03
KFVFVDFENGLGKVLTFFYNCVW-LRIGA-------------
VSLKKKTRKPLGRILLKGDNITLMMNTGK-------------
VSLKKKTRKPLGRILLKGDNITLMMNTGK-------------
VSLKKNTRKPLGRILLKGDNITLMMNTGK-------------
VSIKKNTRKPLGRILLKGDNITLMMNTGK-------------
VSIKKKTRKPLGRILLKGDNITLMMNAGK-------------
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII-GFDEYMNLVLEDAEE
VNVKKKSKKTLGRILLKGDNITLMMNTGK-------------
VNVKKKSKKTLGRILLKGDNITLMMNTGK-------------
VSIKKKSRKTLGRILLKGDNITLMMNTGK-------------
VNIKKKSRKTLGRILLKGDNITLMMNTGK-------------
VNVKKKSRKTLGRILLKGDNITLMMNTGKWTHWDSSTIQQEG
VNVKKKSRKTLGRILLKGDNITLMMNTGK-------------
VNVKKKSRKTLGRILLKGDNITLMMNTGK-------------
VNVKKNTKKTLGRILLKGDNITLMMNT---------------
INIKKDTRKSLGRILLKGDNITLMMNTGK-------------
INVKKNTRKSLGRILLKGDNITLMMNTGK-------------
INVKKNTRKSLGRILLKGDNITLMMNSGK-------------
INVKKNTRKTLGRILLKGDNITLMMNSGK-------------
INVKKNTRKTLGRILLKGDNITLMMNSGK-------------
6: 70-70
AT2G18740.1 3 1 U2 GTGAGTTA..TCAG
estExt_Genewise1_v1.C_1710010 3 1 U2 GTAATTCA..ACAG
CU179877_9.1 3 1 U2 GTAATACA..TTAG
Glyma17g07460.1 3 1 U2 GTATGCTT..TCAG
Glyma13g01320.1 3 1 U2 GTATGCTT..TCAG
Glyma04g38600.1 3 1 U2 GTATGCTA..TTAG
GSVIVP00017697001 3 1 U2 GTGGCTGA..TCAG
LOC_Os02g03440.1 2 1 U2 GTAAGGAA..TCAG
estExt_fgenesh1_pm.C_chr_30075 3 1 U2 GTTAGTAA..GCAG
GRMZM2G014091_T01 3 1 U2 GTTAGTAA..GCAG
7: 85-85
AT2G18740.1 4 2 U2 GTAAGTAA..ACAG
estExt_Genewise1_v1.C_1710010 4 2 U2 GTAAGTTG..ACAG
CU179877_9.1 4 2 U2 GTAAGTGA..TCAG
Glyma17g07460.1 4 2 U2 GTAAGTGA..CCAG
Glyma13g01320.1 4 2 U2 GTAAGTGA..CCAG
Glyma04g38600.1 4 2 U2 GTAAGTGA..CCAG
Glyma06g16410.1 3 2 U2 GTAAGTGA..CCAG
LOC_Os02g03440.1 3 2 U2 GTAAGTGA..TCAG
estExt_fgenesh1_pm.C_chr_30075 4 2 U2 GTGAGTGA..GCAG
GRMZM2G014091_T01 4 2 U2 GTCAGTGA..GCAG
Lj~LjSGA_013855.1
Pp~estExt_fgenesh1_pm.C_840022
Pp~estExt_fgenesh1_kg.C_2090005
Pp~e_gw1.26.139.1
At~AT2G18740.1
At~AT4G30330.1
Pt~estExt_Genewise1_v1.C_1710010
Mt~AC196855_4.1
Mt~CU179877_9.1
Gm~Glyma17g07460.1
Gm~Glyma13g01320.1
Lj~LjSGA_010296.2
Gm~Glyma04g38600.1
Gm~Glyma06g16410.1
Vv~GSVIVP00017697001
Os~LOC_Os02g03440.1
Sb~estExt_fgenesh1_pm.C_chr_30075
Zm~GRMZM2G014091_T01
Zm~GRMZM2G386608_T01
Zm~GRMZM2G386608_T03






VNIKKKSRKSLGRILLKGDNITLMMNTGK-------------VNIKKKSRKSLGRILLKG













Lj~LjSGA_013855.1
Pp~estExt_fgenesh1_pm.C_840022
Pp~estExt_fgenesh1_kg.C_2090005
Pp~e_gw1.26.139.1
At~AT2G18740.1
At~AT4G30330.1
Pt~estExt_Genewise1_v1.C_1710010
Mt~AC196855_4.1
Mt~CU179877_9.1
Gm~Glyma17g07460.1
Gm~Glyma13g01320.1
Lj~LjSGA_010296.2
Gm~Glyma04g38600.1
Gm~Glyma06g16410.1
Vv~GSVIVP00017697001
Os~LOC_Os02g03440.1
Sb~estExt_fgenesh1_pm.C_chr_30075
Zm~GRMZM2G014091_T01
Zm~GRMZM2G386608_T01
Zm~GRMZM2G386608_T03






DNITLMMNTGK-------------















3' UTR introns